XLOC_040732 (mRNA) -

Overview
NameXLOC_040732
Unique NameXLOC_040732
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000212_pilon:379985..381044-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040732 ID=XLOC_040732|Name=XLOC_040732|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1060bp|location=Sequence derived from alignment at sc0000212_pilon:379985..381044- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACTTTGCACTATGGGTAAAAAATTGGATGATCACAAACCTTC GGAAAAAGCGTAAGTCTTTATTAATTCTTTATGAAAGTCAACTTCTCCCT CCATCAAGAATTGCAGAGGCTCTTATGTTTAAAATGTGATTGATTTGACT GTCATCGTGATATCGTGTAGTTTGTTTACCAATCAAATGACATTTTTCTT TGTTTACTTTCCAGTGACTTTTCATCCATCATCAGTTTCTTGGGGTCAGA TATTCGAAAAGACAAGAAGCGAAGGCGTGGTGTAAGTAAAACCTTTTTAT CCGTTCACACCTTCAATGTTCATCCTCAAATACTTTTTCAATCCAGTGTT CTTTGAATAACATTTTCTTTTGTTCCGCCCTTAATTTAATTCAATCTAAA TTATAATATTTATTTCCTTTTGATATTTAGGACGCAGAAAAGAAGCGACG TGACCGAATCAACAAATGTCTCGACCAATTGGAGGAGCTCATTCCATACG TTCGACAGAAAAAGGTAATATTCTATTAATAGCTCTTACCTTTCACCATA TCATATGTCTGTTATTTTTCTTCTTCTACTTCAATTAAATGACAGTCAAA ATTAATACTTCCGATTCGAAATTTTCCCGGAAACCAATTAGCTTTGTTTA TGCACCAATGTGATGACTTCTATTCAATACAGATAATTCATTAAATTTTC TCCCTTCTTTCATTTTAGCTGTGCTCAAAAGTCGATAAAGCAGAGGTTTT GGAATTGACCGTTCATTTTGTCAAAGAAACTTTATTCGAAAAAGAACTTT CTTTCCGTAAAACGCACTTATCTTCAGTAGCAGAATATGAGCGACGGAAA TGGTTGGAACATTCACCTTCGGCTGATTACGAAAGACATTTCTCCGCTCT TCGAAAGTCGCCCACCGAAAAATGTAACTGTGGATGTTCTGACGGCCCTT CTGAAAAATTAAGTCCTCGTCACACTTCACCGATAACATCTTCTTTTCCT TCATTTCAACCGCCCTTGGTGACCGTTCCTCCACTCGTGACGTCACCACT TCATCGCTGA

Coding sequence (CDS) from alignment at sc0000212_pilon:379985..381044-

>XLOC_040732 ID=XLOC_040732|Name=XLOC_040732|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1104bp|location=Sequence derived from alignment at sc0000212_pilon:379985..381044- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACTTTGCACTATGGGTAAAAAATTGGATGATCACAAACCTTC
GGAAAAAGCATGGCACCACTTTGCACTATGGGTAAAAAATTGGATGATCA
CAAACCTTCGGAAAAAGCTGACTTTTCATCCATCATCAGTTTCTTGGGGT
CAGATATTCGAAAAGACAAGAAGCGAAGGCGTGGTTGACTTTTCATCCAT
CATCAGTTTCTTGGGGTCAGATATTCGAAAAGACAAGAAGCGAAGGCGTG
GTGACGCAGAAAAGAAGCGACGTGACCGAATCAACAAATGTCTCGACCAA
TTGGAGGAGCTCATTCCATACGTTCGACAGAAAAAGGACGCAGAAAAGAA
GCGACGTGACCGAATCAACAAATGTCTCGACCAATTGGAGGAGCTCATTC
CATACGTTCGACAGAAAAAGCTGTGCTCAAAAGTCGATAAAGCAGAGGTT
TTGGAATTGACCGTTCATTTTGTCAAAGAAACTTTATTCGAAAAAGAACT
TTCTTTCCGTAAAACGCACTTATCTTCAGTAGCAGAATATGAGCGACGGA
AATGGTTGGAACATTCACCTTCGGCTGATTACGAAAGACATTTCTCCGCT
CTTCGAAAGTCGCCCACCGAAAAATGTAACTGTGGATGTTCTGACGGCCC
TTCTGAAAAATTAAGTCCTCGTCACACTTCACCGATAACATCTTCTTTTC
CTTCATTTCAACCGCCCTTGGTGACCGTTCCTCCACTCGTGACGTCACCA
CTTCATCGCTGACTGTGCTCAAAAGTCGATAAAGCAGAGGTTTTGGAATT
GACCGTTCATTTTGTCAAAGAAACTTTATTCGAAAAAGAACTTTCTTTCC
GTAAAACGCACTTATCTTCAGTAGCAGAATATGAGCGACGGAAATGGTTG
GAACATTCACCTTCGGCTGATTACGAAAGACATTTCTCCGCTCTTCGAAA
GTCGCCCACCGAAAAATGTAACTGTGGATGTTCTGACGGCCCTTCTGAAA
AATTAAGTCCTCGTCACACTTCACCGATAACATCTTCTTTTCCTTCATTT
CAACCGCCCTTGGTGACCGTTCCTCCACTCGTGACGTCACCACTTCATCG
CTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040732XLOC_040732-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212_pilongenomesc0000212_pilon:379985..381044 -
Properties
Property NameValue
Aaloc211-552:343
Aaloc127-210:631
Aaloc61-126:846
Aaloc1-57:1061