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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:321750..327028- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040729 ID=XLOC_040729|Name=XLOC_040729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5279bp|location=Sequence derived from alignment at sc0000212_pilon:321750..327028- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAATATGATGGAAAGCAAAGGTACAACAAGTTCTATAGTATGTG
AGACAAAATCTAATTCATTTATGAAATTGGCATATTGTCTCAAAAGTTTA
GGATCGTGACTCAAGATGCAAAAAATACCTTTTTTGTAAAGATTGTATTT
CAAGCTCACATAGGTATGTAAAGGAGGTGGATTTTAAATTGCTCTCTAGA
AACTTTTTGGAAAAACGGTAATCTTTCTCACTTTGATATTGGTTTTGTGT
ACGAGATCAGGGTCAACTAGGATTCACAGAACAAAAGCAAATTAGAAACT
TCACATTATGGTCTAGCTAGAAGCAATAACAGCTGAGAGAATAGCAAGTA
GCTTTTATTTACTGAGAGATATTAGTATACATTAAATTTTCAATCAGCAA
GAAATGTCTACCATCTGATTTTCTGAATTAATGTATCTGTCTTTCATTTG
ATTCATGTTAAACTTAAATTTTTATATTTTTAGTTATGCTGGTGGAGTTC
CTGGAAGGTATGTCGGATTAATTTATGTGATAAGTTTCTATAAAAATAAT
CGTTTTTCAGATTGTGTTTTATTTCTAGAATTGCATCCTGATAACAATAA
TTTGATGCTTAGAAATATATTTTATCATTTTGATTTCTGGTGTTTGTTGG
AATTGCATATGCCTGCTAACAATTATTTCATCATTTTTTATATCATCACT
ATATATTACTGTCTTCTTTCACCTCACTTGACCTAATCTGACTTGGAAAT
AAATTTTTTTTTCTAAACAGTATCATGGATGACGATGATACACGAGCCAT
CAGCCCTTCCAATAACCTCTTTCAACAGAAACTGGAACAACAGGTAAGAC
TTGACCATGACCAATGTTAATTTAGATAATAGTGTCAATACATGTCTCTA
CTCCTGCAAACAAAATCATTTTGACCTTGTTAAGAATCAATTACAAAATC
AATGGTTGTAAAGGCCGGTCTCCACCTTGAAATAGGCGACAGTTTTTTTT
TAACCTTTTCTGTCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGCGCG
AACAAAAAAAAGTTGAAGGAAGTTCTACTTTTTTCATCCGTTACGTCGAT
TTTGACCAATGGAATTGCTTTATTTTTTGAACCGTCCATATGACCTTATA
AAAACGTCGAAAAGCTTTTGCTCATGTTGGATTCTTCTGTTATGTCAATA
CCACGTCTCCAGAAGTTATTGATAGAAAATGAAGAGCTATAAAAAGGAAG
AGCGGTGATGAAAAGTCTTTTGGAACACTATACTTGATACTGCAACTTCT
GAGGTAAGTGCGCTATGATCAGTATACCTAAACTCTAGCTTTTTTTTAGA
GACAACGTACTGCAGCGAAGCAAAGGCAAAAAAGGATGGGTTCAGGTAAA
AATCTTTTTCAATTCATTAAAGAATTCAAAAGGGGCTAGCATTATTCAAG
GCTGAATCTTGGGGGTCACCCAGGTAAACGAAGGTGACAGTTATGCTTTC
ACCTCTTTTGGAGCTTCTAATTTTGCTAATAGTCACAAAAATCATAAAAG
TACTAAAAACCTCAAATAAATGTTGAAGATTAAAATGTTGGCTCTATTTC
CCTGATTTCCAATTTTCTTCCATGTAGGAGCCAAGCCAATTAAAATAACT
CACTGTTCATCCTCTTACAGGTATGATGCAGGCTAACGACAATTTGAGAC
CACGAACAGCGGGAAGTACGAGACCTCGATCCGCAAACAAACAATGGCAA
AGTAGTGGAGTTAACGGTAAAAATGTTTTCTAGTGAATCACCTGTTCTAC
TTCTAGTTTCACAATTTTCACGTGGTCTAATGAGTTTATGCTATCTTTGA
AGTTTACTTAGACAACTGGAGTGTTTGAAAAGCTCTACTAATGAAAGTAA
AATTGTACTTTTCCGTGTCGATTGAAAAGTTTTTCTGTCGTTTGATTGCA
GATGGAACAGGAATGGTGAATAGTGGATTCGTTTCGGATAATCCCAATTC
CAATCACGTTAACAATGAAAATACGGACGAAGATGGAATCCCCACTGAAG
TAAGAATACATTTTCATTCTAACACCCTTCCCTATTATTTCGTTCCCCTA
ACAAACAAAGGGGAGAGATTTATTTTTAATGCCGGCTAATTGACAAGCTC
CTTTTTTATTCGTTTTGCCTCTTCATCTTATGTTATTGTAACGCTTTTGT
GTAAAGCTTTATCACACAAAGAGTACCATCAATAATTAATGAAGTTAAGT
AGGTGAAATAACAAAGCTTTTGGCACATTTTCACGACCACTTCTTAGGTT
TTTTTCTACTAAAGATATCCCAAGTACAATTTTTTAAAGTTTGACTTTCT
CAACAAGAGAGAGATAAAGAAGGGAAGATGGCATATTACAAACGTCTGCG
TTACATGGGCACACCCGATTCTTCTCCTGTAAGCCTCACTTCTCTTATAT
ACAATCTTTTCCCTTCCATTTTTTTCATCAAGTGAATATTCTTCTTCTTT
CCCGTTTACAGATTGTAGATGGAGGTATCCGTCAATCGCGCAACTCACCC
ATCAACAACACTTCCACAACTCAAATCGTCGACTCGTCGGACGACAATGG
TGATGATGACGACGACATCGAATCTGCTGAACTTCCTGTCGTTCAACCTA
ACGTCCGTGCTGAACGCTCGGCCTCCCCTTACCGCGATGCCGCTCCCGTA
GATATCAGACAAGGGTCTGACTCCAACGAAAAAGTAATTGACTTTCCTTT
CCTTTTTCCCTATCTTATTTAAGAATTTCATCAATCTCAAATCAGAGTTG
GCTTATTATTTTCTTGATCGAACAAAAAAGTGAAATATTTTACTTTTGTA
TTGCAGCTACAAATGAAAAATACGTCCAACGATATTGAGGTTGGAGACGT
CAACGAATTCATATTAAGGTAAACTGATAAAATCAGTTTTGTGTTCTTTA
GATTTTAAGTGTTTTCGCCTACTTTGAGGTTTTAATAATTTGAAGTATAC
AGGTGTCATCAAAGGTTTCTCTAACTTGTATCAAACCCACACAGGGGGGG
GGGTATTTTTTATTATGGAAATAAATTTTTCTATATGGTGGTCGATTTCT
CAAGTTTACAGTTTCCATGAAACCAAACTGAGTAAGAGTTTTGTCTACAA
TAAATTCATCTAACTAGAAATATAAAGTTTCCAGTGTTTTCTAGATTGAT
CTTTGATAACACAATTAGGAGAATATGAACTTGTTTTACTTTCTGATAAT
TAAAACATGCACCTCATCTTGTCTGTCCACCCTGTACAAGAAGGTTACTC
TGAGCTTACAAACCCTTTTCTCATTATCTAAAATGAAATAGTAGAGTTAG
GTGCATGCTAAGAATATTTCTCCTGCTCTGCAATGTGAAGCCTTTCCGTG
GAAAGGAAAATTAATTCGCAAAATTATGCACGTGCAATTTAATCTGAAGT
TCAAGTAGAAGCTTTCTGCTGACTTTCTCTTAAATAATCAACTTGTTTTT
GTTTACAGACCAGCACCACAAGGCCAAACGATCAAATGTCGAATAACACG
AGATAAAAAAGGTGTAGATAGACAGATGTTTCCGACGTACTTCTTACATC
TCGAAAAGGATGATGGGAAAAAGGTACTTTATTTTACAATCAAATGTGTA
TGTGCTGTAGTGTATTTACAGAAGTGAGAAGAAACCTTTTAATAATTTAT
GCATCTTTAGGTATTTTTGTTAGCTGGTCGAAAACGTAAGAAAAGCAAGA
CCTCCAACTATCTGATTGCGGTTGATCCGATTGATTTATCCAGAGCTGGT
GAAAATTTCGTCGGCAAATTGAGGTAAATCAATTGTTTTGTTTTCAAACT
GCTGTTTACACTTTCCTGTCACGTGACATTAGTACTAATAGAGAGTATTT
TTTATTCCGCTTATACAACTACTCAAGTTATCAACGCGAACCCTCGCTTT
AATAACAACCCAATAACAAAATTTGACATGAGGTAATTTTCAAAAACCCT
GCTTTTCGCGTTGATAAATTGTCTCAATCATTTTCCCGCCTAAGTGTAAG
CATAGTCATTATAAAAAAATTTTTATAATGACTATGGTGTAAGTGAAATA
AGGTTTTTTCCGCTTTATCACAGGTCAAATCTAGTGGGCACCAAATTCAC
ATGTTTTGATGGCGGTAGAAGCCCTAAAAAGGGTGGTGTTCTCACAGACG
GTTCAAATCTTCGAGAAGAACTTTGTGCTATTATTTACGTAAGCTTTTTA
TTTTTTATTTTTAATGCTTGTAATTGATCTTATTTTACTTTTGGACTATT
TTCTTTTGTTTGAGGATATTTTTCCTGGCCATAACTCGATGTAAGGTAAA
ACCTTTCCATATCTTTTTTCAGGATACAAATGTGTTAGGTTTCAAAGGAC
CACGAAAAATGACAGTTGTTATTCCTGGAATGGGTTTGGATCATCAACGC
GTACCTATTCAACCACAAAACGTAAGTCTATCTTTGTGAGGTGGATAACT
TTGCCAAATATTAACCATTGAGGTATAACAACGAGTTTCTTTACATTTGC
GCTTCTTTTTAGGAAAACGAATGCTTACTAGAGAGACATAGAACGAAACA
CATGGAAAATCTGATTGCTTTACAAAACAAAACTCCTGTTTGGAATGATG
GTACGTACCTTCTTTTGTTTTTATTTAAGGTGTGACTGGAGTATTATTCT
CAACTTTGATAATGCCCTCCCGCATGATGTTTTTCTGTTTGTCTTTGACT
AAAAAATATACCTTTCATAAGGTCCAAATCACCTATTTATCGCCCATTTT
TGACTTCTATCGGTAACATTTCGATACTTTAAGCATCACTTCGTCTTTTT
TAGATACACAGTCGTACGTTTTGAATTTTCATGGTCGCGTCACTCAAGCA
TCAGTGAAGAATTTTCAAGTGGTGCACGAAAATGACCGTAAGTCTTTCTT
TTTGTTGGCCATACCTGATGAAACAGGAGTGCTTAACATAGGGAAGGTCT
GCATATCAAGCCAAGTCTAATTATGTGTTGACTATATGTATTCTTTCTAA
TGTATGCCAGTGTATGCAATAAGAAAAGTGCCAATCTCGTGTTGCCTAGG
TAGCCTATTGATTGTTTCATCGATTTAATTTTTTGTCACTTGTAGAGGAT
TATATCGTGATGCAGTTTGGACGAGTTGCCGATGACGTGTTCACCATGGA
TTTCAACTACCCGCTATGCGCTCTTCAAGCCTTCTCCATTGCATTAAGTA
GTTTCGATGGAAAGTTAGCATGTGAATAA Coding sequence (CDS) from alignment at sc0000212_pilon:321750..327028- >XLOC_040729 ID=XLOC_040729|Name=XLOC_040729|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000212_pilon:321750..327028- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAATATGATGGAAAGCAAAGATGAAGAAATATGATGGAAAGCAA
AGTTATGCTGGTGGAGTTCCTGGAAGTTATGCTGGTGGAGTTCCTGGAAG
TATCATGGATGACGATGATACACGAGCCATCAGCCCTTCCAATAACCTCT
TTCAACAGAAACTGGAACAACAGTATCATGGATGACGATGATACACGAGC
CATCAGCCCTTCCAATAACCTCTTTCAACAGAAACTGGAACAACAGAGAC
AACGTACTGCAGCGAAGCAAAGGCAAAAAAGGATGGGTTCAGAGACAACG
TACTGCAGCGAAGCAAAGGCAAAAAAGGATGGGTTCAGGTATGATGCAGG
CTAACGACAATTTGAGACCACGAACAGCGGGAAGTACGAGACCTCGATCC
GCAAACAAACAATGGCAAAGTAGTGGAGTTAACGGTATGATGCAGGCTAA
CGACAATTTGAGACCACGAACAGCGGGAAGTACGAGACCTCGATCCGCAA
ACAAACAATGGCAAAGTAGTGGAGTTAACGATGGAACAGGAATGGTGAAT
AGTGGATTCGTTTCGGATAATCCCAATTCCAATCACGTTAACAATGAAAA
TACGGACGAAGATGGAATCCCCACTGAAATGGAACAGGAATGGTGAATAG
TGGATTCGTTTCGGATAATCCCAATTCCAATCACGTTAACAATGAAAATA
CGGACGAAGATGGAATCCCCACTGAAATTGTAGATGGAGGTATCCGTCAA
TCGCGCAACTCACCCATCAACAACACTTCCACAACTCAAATCGTCGACTC
GTCGGACGACAATGGTGATGATGACGACGACATCGAATCTGCTGAACTTC
CTGTCGTTCAACCTAACGTCCGTGCTGAACGCTCGGCCTCCCCTTACCGC
GATGCCGCTCCCGTAGATATCAGACAAGGGTCTGACTCCAACGAAAAAAT
TGTAGATGGAGGTATCCGTCAATCGCGCAACTCACCCATCAACAACACTT
CCACAACTCAAATCGTCGACTCGTCGGACGACAATGGTGATGATGACGAC
GACATCGAATCTGCTGAACTTCCTGTCGTTCAACCTAACGTCCGTGCTGA
ACGCTCGGCCTCCCCTTACCGCGATGCCGCTCCCGTAGATATCAGACAAG
GGTCTGACTCCAACGAAAAACTACAAATGAAAAATACGTCCAACGATATT
GAGGTTGGAGACGTCAACGAATTCATATTAAGCTACAAATGAAAAATACG
TCCAACGATATTGAGGTTGGAGACGTCAACGAATTCATATTAAGACCAGC
ACCACAAGGCCAAACGATCAAATGTCGAATAACACGAGATAAAAAAGGTG
TAGATAGACAGATGTTTCCGACGTACTTCTTACATCTCGAAAAGGATGAT
GGGAAAAAGACCAGCACCACAAGGCCAAACGATCAAATGTCGAATAACAC
GAGATAAAAAAGGTGTAGATAGACAGATGTTTCCGACGTACTTCTTACAT
CTCGAAAAGGATGATGGGAAAAAGGTATTTTTGTTAGCTGGTCGAAAACG
TAAGAAAAGCAAGACCTCCAACTATCTGATTGCGGTTGATCCGATTGATT
TATCCAGAGCTGGTGAAAATTTCGTCGGCAAATTGAGGTATTTTTGTTAG
CTGGTCGAAAACGTAAGAAAAGCAAGACCTCCAACTATCTGATTGCGGTT
GATCCGATTGATTTATCCAGAGCTGGTGAAAATTTCGTCGGCAAATTGAG
GTCAAATCTAGTGGGCACCAAATTCACATGTTTTGATGGCGGTAGAAGCC
CTAAAAAGGGTGGTGTTCTCACAGACGGTTCAAATCTTCGAGAAGAACTT
TGTGCTATTATTTACGTCAAATCTAGTGGGCACCAAATTCACATGTTTTG
ATGGCGGTAGAAGCCCTAAAAAGGGTGGTGTTCTCACAGACGGTTCAAAT
CTTCGAGAAGAACTTTGTGCTATTATTTACGATACAAATGTGTTAGGTTT
CAAAGGACCACGAAAAATGACAGTTGTTATTCCTGGAATGGGTTTGGATC
ATCAACGCGTACCTATTCAACCACAAAACGATACAAATGTGTTAGGTTTC
AAAGGACCACGAAAAATGACAGTTGTTATTCCTGGAATGGGTTTGGATCA
TCAACGCGTACCTATTCAACCACAAAACGAAAACGAATGCTTACTAGAGA
GACATAGAACGAAACACATGGAAAATCTGATTGCTTTACAAAACAAAACT
CCTGTTTGGAATGATGGAAAACGAATGCTTACTAGAGAGACATAGAACGA
AACACATGGAAAATCTGATTGCTTTACAAAACAAAACTCCTGTTTGGAAT
GATGATACACAGTCGTACGTTTTGAATTTTCATGGTCGCGTCACTCAAGC
ATCAGTGAAGAATTTTCAAGTGGTGCACGAAAATGACCATACACAGTCGT
ACGTTTTGAATTTTCATGGTCGCGTCACTCAAGCATCAGTGAAGAATTTT
CAAGTGGTGCACGAAAATGACCAGGATTATATCGTGATGCAGTTTGGACG
AGTTGCCGATGACGTGTTCACCATGGATTTCAACTACCCGCTATGCGCTC
TTCAAGCCTTCTCCATTGCATTAAGTAGTTTCGATGGAAAGTTAGCATGT
GAATAAAGGATTATATCGTGATGCAGTTTGGACGAGTTGCCGATGACGTG
TTCACCATGGATTTCAACTACCCGCTATGCGCTCTTCAAGCCTTCTCCAT
TGCATTAAGTAGTTTCGATGGAAAGTTAGCATGTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:321750..327028 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1264-1395:133 |
| Aaloc | 1180-1260:425 |
| Aaloc | 1090-1176:718 |
| Aaloc | 991-1089:908 |
| Aaloc | 877-990:1156 |
| Aaloc | 763-873:1570 |
| Aaloc | 649-762:1771 |
| Aaloc | 586-645:2424 |
| Aaloc | 364-585:2769 |
| Aaloc | 268-363:3327 |
| Aaloc | 172-264:3608 |
| Aaloc | 124-168:3931 |
| Aaloc | 52-123:4509 |
| Aaloc | 28-48:4796 |
| Aaloc | 1-24:5280 |
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