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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:310256..313891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040728 ID=XLOC_040728|Name=XLOC_040728|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3636bp|location=Sequence derived from alignment at sc0000212_pilon:310256..313891- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTGCACCTGCTTCAGAGGTAGGCAATAAGAAGTACAAACACTTAA
TTGCAATGTTTTTTTCCAACTTGGTAATGAGATATTGGCAAAATCATGAC
ATGAGGGGAATCTAGATATATAATAGTGGTTTAGAGAAACACAACGGTTT
ATTGAATAACTAATAAAGCATAAATGAAATCTTTTTTAATGATAACTTCA
TCTAATTGTTTTGTCTTTTACAACACAGCTGTTACCAAGGGAAATATAAT
TTAGCTTGTTCGTACTGGTTGAGGGCAAGTCATGTGTGCTGTAGCAATTC
GTTATTCAATAGTCCTTTGTGTTGTCCTAATGTCTATTCTGATACCCTTT
TAATCTCACCAAATGAGGTCTTCATAAAACAAGGAGAATTTTCTGAAAAT
ATAATTTCACACTAAAATTCTTCGTGTTAGTAACAGAAAGCCAAGTAGCT
ATTTTATCGATTCCATCTCCTTTGTATTTGTCACAAGCCACAAGCAAGTT
TCCTCAGTAACAAAAGCAATCAAGACAAAACTGTAGAATCTGACTTATCT
AGGGATGAATCTTCAAACTCCTTGCAGAAATGTTAACTTATATGATTATA
CATAGGTGCGACCAAATGGTGTTCTCTTTCAAGACCTTCAAGATATTGGA
AGAGACAAGAAGTATTGAATGCTATTGCCAGATATTGCAGTTCAAATCAT
GAATTACCAAGGTCAACTGATCTTGTGCCGCCTGACAAGAAGTTCATGCA
AGATGTAGCATTTGATGAATTTTGTAAGAAGGTTGCTTCTTTTGTTTCGG
GATGAGCTGGAGTTTTTACAAGATACTTCACTAATTGGTCATTTGAAGTG
ATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTTTTATTACAT
CTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTC
CCTTTGTTTCTCGACTTTTTGATATTAGCTTTACGAGACCTAATTAGTTA
TTAAGTCAATCTTTTTACGAAAACACAACCCTTCAAAAAAAACTTTTGTT
AAAAATTTCAGCTGAAAGACCATACTATCACAAGCCATTACGTCAGATAG
ATTACAACGTCATTTACACTAAGAATACCATTATCTCAGCATCAAGGGCG
CTGAGTGATTACCTTCTAACTGTCGAGTAAGTTGATATCTGTTACATTCA
ACTTTCTTACTCATGTCATGATTATAAATGGAAATTAAATACTTAGAAAT
CAGCCGACTGATACTTATTAAGTTCAAGCTAAGAAATGTTATTTGAAAAA
GCCTTCAAAGATCCTTACCGAATTAATGATGAAATTGACATTTTCTTAGG
GATCTGGATGGGATGAGAAAGACAGCAGTACGAACAGCCTATAATGACAG
CGAACTTCCTCCTGATTTTTGCTACTTGAAAGTTGACGTAGAAAAAAGGT
TTGTTGTTTTTACTCGTCATACATTGTATTGAATTAATTTCATTCAGAGA
ATTGTTGGTGTATAGGACATGATTGTGTAACTTCATTTTCATAGGGCGTT
GGAGAGATGGGGAAGTATTGAAGCCTTGGAGCGAGAAAAAGAGAGAAGGA
AAGAAGCACTGGAAGAAGGTGAACGATATCGGAAAGGTAAAAAAAAGAAC
CATTTCATTTTATAGATAATAAATAGTCAAAGGAATTGCTCTGATGGACT
CTAGAAGACTGAAAATTAACTCTTCCGCCTTGAAACTTCCTATGATTTTT
ACTTGATTTGTCCACTTGATTTTCAAAAATGATCCTCTCTACCTTTTGGT
AATTCTTTTTGGGAGAGGACACTATGCTCTATACATTTTTTACTCTTCTC
ATTCTGTGCGTTTCTTTCCAGACTTGAGTGCTTTGATTGGACATTTGAAG
AAAACAGTGAAAGATCAAACGAAACAAGAAGACTTGAACCGGGTATGAAC
TGATACTGTCCACACTCCAGCTTTTGTTTCTATCAGTGCTCGAAGACATT
CTTTTCATTTTTTTCATTTTTTACAGATACTGGGAACAAAAGAACAACGT
GAAGGGATGCTGAAGGGATCTGCCAAAGTTGTTCTTTATGCCGTTGCTTC
GTAAGTTTTTATGCTTTGAATTCTTCAGATTCTTCCGAACAAGATCAATT
CAAAGAATGCACAGCTCCCACTTTACATGTACAAGCATTTCGGACAATAA
ACTTTGATAAATTACTTTTTTGATTCATTTTCCAGTAATTTCACAGTGTC
CATCATGAAGTTCGGAGCGTATTTCTCGACGGGGTCAGCTGCTATGTTGT
CTGAAGCAATTCACTCCATGGCTGACCTTGCAAATCAGGCGAGTCCCCTT
TTTTGTATCGATTTTAATTCTATGAATCTTCATTAAAATTGATATAGAAA
TGATGACAAAGCAGAATAAACAATAAAATCTTCACAACTTTATGCTTGGT
GACACAGGAATGGGAGAACGATGTTCTTTCTTTGTTTAAAAATACTTTTA
GCAAATGTTAGGACGTACGTTTGTAATGATTGTCCTTTAAAGACTAATTC
ATTTAAAGTCTATACTACAATCAAAGTCATGATATTTGAGAAAAAAGGGA
AATTCCCACGAAATCTTACAACCACAAACGATTTAGAAGCGCTCTAGATT
AGGTCGGGAAGGAGTTTTAACTGGACCTTAGGATCTGAGGATCCAAAAGT
CCAAGATTGGTCCAATAGGGCTAAGAATATAGCCTGGAAGTCTATAAACC
CCTCCCTAATTGAAATATTCGAATCAATTTATCAATTAGCCCAAAAGCGA
CTTTCTTGTCCGAACTTCTTTAAATTGCTAAAAACGAGGAATTAACCAAA
ATTCTCAATATATTTTGACCCGAGATTGTAGTGCATCAATCTTCTATACA
TCAATCCCACCCTTCCACTTAATCATCTTTATTTCGTATAATTTAGGTAT
TATTGGGCTTTGGAATTTGGCAATCGATCAAGCAACCCTCGCTAGATCAT
CCGTAAGTTGATTCTTCCTCTCATCGAACATCAGAGAAAATTGTTCTTTC
TTCTTCAGGAAGTTTGATGACTTTCTTTCTTTAGGTACGGATGGGAGCGT
TCGCGTTACGTGTACGCCTTGATCAGTGGTTGTGGAATTTTCTTTTTGGG
ATGTGGTTTCTCTGTTTACCACGGGATCGCACAAATCATCGAACCTGCTC
CACTCGAACACCTCCACACTGTAAGAATTCATCTATGCCCATGCCATCAT
TTTCTAATTTATTTTTTGCTAAAAAAATATTTTTGTTTTTGTTTATTGAC
CAGGGATTTCAAACATTCATGCTTTTGATTTCGTTTTAGGCGTACGCTGT
TTTGGCAGCTTCGTTCGTCGTTGAAGGAGGTAAGAATACGAGAAGAGAAG
TTTAACGATACTTTGAGAATCGAAAGGTCAATTTTGTCAATCCTTTTTGT
AACACTTTAAAGAATGTTGTCGGTTTGAAATTTTGTGATGTTTTCTTTTC
AGCTACCATGGCCACCGCTTTAAAGCAAGTTCAACGGAGTGCAAACGAGG
CTGGAGTGTCGATACGAGAGTATGGTATGTCTCTACCTTTATTATCACAA
GTGTGCAATGTGACCGGAAAACAACGGGACATAATC Coding sequence (CDS) from alignment at sc0000212_pilon:310256..313891- >XLOC_040728 ID=XLOC_040728|Name=XLOC_040728|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000212_pilon:310256..313891- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTGCACCTGCTTCAGAGATGTTTTGCACCTGCTTCAGAGGTGCGA
CCAAATGGTGTTCTCTTTCAAGACCTTCAAGATATTGGAAGAGACAAGAA
GTATTGAATGCTATTGCCAGATATTGCAGTTCAAATCATGAATTACCAAG
GTCAACTGATCTTGTGCCGCCTGACAAGAAGTTCATGCAAGATGTAGCAT
TTGATGAATTTTGTGCGACCAAATGGTGTTCTCTTTCAAGACCTTCAAGA
TATTGGAAGAGACAAGAAGTATTGAATGCTATTGCCAGATATTGCAGTTC
AAATCATGAATTACCAAGGTCAACTGATCTTGTGCCGCCTGACAAGAAGT
TCATGCAAGATGTAGCATTTGATGAATTTTCTGAAAGACCATACTATCAC
AAGCCATTACGTCAGATAGATTACAACGTCATTTACACTAAGAATACCAT
TATCTCAGCATCAAGGGCGCTGAGTGATTACCTTCTAACTGTCGACTGAA
AGACCATACTATCACAAGCCATTACGTCAGATAGATTACAACGTCATTTA
CACTAAGAATACCATTATCTCAGCATCAAGGGCGCTGAGTGATTACCTTC
TAACTGTCGAGGATCTGGATGGGATGAGAAAGACAGCAGTACGAACAGCC
TATAATGACAGCGAACTTCCTCCTGATTTTTGCTACTTGAAAGTTGACGT
AGAAAAAAGGGATCTGGATGGGATGAGAAAGACAGCAGTACGAACAGCCT
ATAATGACAGCGAACTTCCTCCTGATTTTTGCTACTTGAAAGTTGACGTA
GAAAAAAGGGCGTTGGAGAGATGGGGAAGTATTGAAGCCTTGGAGCGAGA
AAAAGAGAGAAGGAAAGAAGCACTGGAAGAAGGTGAACGATATCGGAAAG
GGCGTTGGAGAGATGGGGAAGTATTGAAGCCTTGGAGCGAGAAAAAGAGA
GAAGGAAAGAAGCACTGGAAGAAGGTGAACGATATCGGAAAGACTTGAGT
GCTTTGATTGGACATTTGAAGAAAACAGTGAAAGATCAAACGAAACAAGA
AGACTTGAACCGGACTTGAGTGCTTTGATTGGACATTTGAAGAAAACAGT
GAAAGATCAAACGAAACAAGAAGACTTGAACCGGATACTGGGAACAAAAG
AACAACGTGAAGGGATGCTGAAGGGATCTGCCAAAGTTGTTCTTTATGCC
GTTGCTTCATACTGGGAACAAAAGAACAACGTGAAGGGATGCTGAAGGGA
TCTGCCAAAGTTGTTCTTTATGCCGTTGCTTCTAATTTCACAGTGTCCAT
CATGAAGTTCGGAGCGTATTTCTCGACGGGGTCAGCTGCTATGTTGTCTG
AAGCAATTCACTCCATGGCTGACCTTGCAAATCAGTAATTTCACAGTGTC
CATCATGAAGTTCGGAGCGTATTTCTCGACGGGGTCAGCTGCTATGTTGT
CTGAAGCAATTCACTCCATGGCTGACCTTGCAAATCAGGTATTATTGGGC
TTTGGAATTTGGCAATCGATCAAGCAACCCTCGCTAGATCATCCGTATTA
TTGGGCTTTGGAATTTGGCAATCGATCAAGCAACCCTCGCTAGATCATCC
GTACGGATGGGAGCGTTCGCGTTACGTGTACGCCTTGATCAGTGGTTGTG
GAATTTTCTTTTTGGGATGTGGTTTCTCTGTTTACCACGGGATCGCACAA
ATCATCGAACCTGCTCCACTCGAACACCTCCACACTGTACGGATGGGAGC
GTTCGCGTTACGTGTACGCCTTGATCAGTGGTTGTGGAATTTTCTTTTTG
GGATGTGGTTTCTCTGTTTACCACGGGATCGCACAAATCATCGAACCTGC
TCCACTCGAACACCTCCACACTGCGTACGCTGTTTTGGCAGCTTCGTTCG
TCGTTGAAGGAGGCGTACGCTGTTTTGGCAGCTTCGTTCGTCGTTGAAGG
AGCTACCATGGCCACCGCTTTAAAGCAAGTTCAACGGAGTGCAAACGAGG
CTGGAGTGTCGATACGAGAGTATGGTATGTCTCTACCTTTATTATCACAA
GTGTGCAATGTGACCGGAAAACAACGGGACATAATCCTACCATGGCCACC
GCTTTAAAGCAAGTTCAACGGAGTGCAAACGAGGCTGGAGTGTCGATACG
AGAGTATGGTATGTCTCTACCTTTATTATCACAAGTGTGCAATGTGACCG
GAAAACAACGGGACATAATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:310256..313891 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1110:133 |
| Aaloc | 937-975:298 |
| Aaloc | 802-936:552 |
| Aaloc | 745-798:691 |
| Aaloc | 643-744:1401 |
| Aaloc | 568-639:1611 |
| Aaloc | 499-567:1764 |
| Aaloc | 406-495:2092 |
| Aaloc | 307-402:2287 |
| Aaloc | 193-303:2574 |
| Aaloc | 25-189:3030 |
| Aaloc | 1-21:3637 |
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