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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:357195..362959- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040726 ID=XLOC_040726|Name=XLOC_040726|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5765bp|location=Sequence derived from alignment at sc0000212_pilon:357195..362959- (Clytia hemisphaerica_ch_hm2_pilon)
TTACAGTTTATGTACACAACAGAATACCAAAGGAGTTTTCTTGCTGGCAT
AAACCAACGATCCCCATCAAAAGAGCAGGCAAATAAATTCATCACTCCAA
GATCTCCACCAAGAAGAGGCAGTACTGAAAAATGTTCAATTGGTATACAA
ACAAATGCTGATCACAAAAGAGTTCATTTCAAACGATATTCTGATCGAAG
TCCAATCAACCAAGTGAGTTTGATTTGAATGAAGTCTATAATATAATGAC
GCTTGAGGGAGGATAATGCCTCTCTATTTCGAAGGGAACTGATTTCATGA
TCTTAAAATGCCTTTATTTTTGAGGGGTAATTGCTCTGTATTTATTTTCA
GGAAAATAGCTTTGTATTTTTTTTCAGGAAAATAGCTTTGTATTTTTGAA
GGAAAATGCCTCAGTATTTTTAAGAAAGATGCCTCCATGATGCCTCGGTA
TTTTTGAAGAAAAATGTCTCTGTATTTTTGAAAAAAGTGCCTCTATATTT
TTGAAGAAAAATGTGTCTGTATTCTTGAAGGAAAATTACTCTTAGGTTCC
AAATAAACGGGGGAGGGGGTGGTGTTGGAAATTGTACTTCTGGAAACCCC
AAAATAAGGTAAATATAGGCTAAAATCAGGCTATTCAGAGCCAAATAAGG
GGCCTTCTCTTTGACAGCTTAAAATATTCTTAAAAATTAATAAACAGGAG
GGTCCTAATATAAGGTCCGAGGGGTTGGAAAATTTTCGAAAAATTAACAA
GCGATGGGTCGTTTGTCTTATTTTGAAGGGGAATTCTTTTATGTTTGAAG
GAAATTACCCTATATCTTTGAAGGAGAAGCTTTTTTCGATTAGGGATGGA
GGTTTTGTATTGATGAAGAAAAATACCCTTGTATTTTTGAAGGAAATGGT
TTTGTATTCGTGAAGAAAAATACCTTTGTATTTTTGAAGGAAAATGTCTC
TGTATTTTTGAAAAAAAGTGCCTCTGTATTTTTGAAGGAAAATTACTCTT
AGGTTCCAAATAAACGGGAGAGGGGGGGGTGGTGTTGGAAATTGTACTTC
TGGAAACCCCAAAATAAGGCAAATATAGGCTAAAATCAGGCTATTTGGAG
CCAAATAAGGGGCCTTCTCTTTGACAGCTGAAATTATTCTTAAAAAAATT
AAACAGGAAGATCCTAATAAGGTCCGGGGATTGGAAATTTTTTGAAAAAT
TAACAAGCGATGGGCCGTTTATTTGGAACCTAAGAGTACTCTCTGTATTT
TTTAACAAAAACATTTTTTAATGAGGAAGAAAAACTTTGCATCCTTCCTG
ATGAAGAGAAATTTCTCTATATTGACAAAGGAAAATCTTTGTCTTATTTT
AAGGGAAATTCCTTTATGTTTGAAGGAAATTACCCTATATCTTTGAAAGT
GAGGCTTTTTTTGGGGAGTTTCTAAACGTCAACCAGAAATGATGACCACG
ACCGGTGACCACGACCAGCGACCACATAAATTTGGGTTATCAAGTTTTTT
CTCTTTCTCCAACGTAGAGTGTCTCTCCTAATCATTTGAACAATATATTT
AATATTGAAGAGTAAGCTCACCCCTGTCTCATTTATAATTAAAGCCACGT
GCCAAATACGTTAAAACAACCATTTCAACGCTCTTGGAGCTTCATTATGG
TGTCAATTTCTATCCTTTTGTATTATCAGCATCACAATAATTAGTGGCAC
AAAATTTTCTGAAAATGGTTTGAGAAGCTAAGTTGTATTTCATCATCAGA
TTGTTATTTCTGTTGAAATTAGTCATTTTGTCAGCATAACGACAATAGAA
TAATTGATTAAATTCATATCTCTAAAACTGGCCTTCCCAATTTTTTCCTA
CTGACAAGTTCTATCTATTCATACTAAAGGCATCTCATTCAGCATAATTA
AAATATTTTGTTTAACAAAGCTTACAAACATCATACTTAATGACCATGTC
AATATTTTTGTCAAATAGTGCCACTTTGTCAAGAAAATGACTGATTACTT
GAAAGGTCACTTTTTAGTTACTCTGTACCAGAGTGTATCTCACGATTATC
GTAGCATAGTTCACTCTGTGCGCATTGTCTGTTTGATAAAAATTTTTCCG
TACGGAGACCTCTGCGATGAAGTATAATTTTAAAATAAAATGGCCGCCAA
AGTACGACAATTGTAAACAAAGGGATGGGGTCCATGATTGAGGGTCACTT
TCTAAGCATGTTTTGGCTGCTTTTTTAATGTTTTTGAGCCAAACTAAAAG
CTGAAAAGTAACAAAGACATATTCAAAATTGTCTAACAGAAAATTATTTT
CCAATGACCCTATTTTTCCATGTAAAATATACACATTTTAATTACAAAAG
TTATGCCAACAAAACAAACTATAGCCACTCTACATAGATCAAATGCCGTA
AAAGTAATACTGAATTTGAACATAAAAACATACAGAGATTCTATGAGTAT
ATATTCTTTCGCAAAGAACTGAAGTTAAAACCACTTTAAAAACAAGATTC
CAATCAAACAACTTCTCTCTCATGTTTATGAACTCAAAGATCCAAAATGT
AAACAAAAAACATTCGATTTGTGCAAAAAGAGTTATTTTGCAATAGAATG
TCTCCAAAGATCCAAAATGTAAACAAAAAACATTCGATTTGTGCAAAAAG
AGTTATTTTGCAATAGAATGTCTCCAAAGATCCAAAATGTAAACAAAAAA
CATTCGATTTGTGCAAAAAGAGTTATTTTGCAATAGAATGTCTAATGTCT
ACATAGAATGTAAACTCGATAATCCAAATTTATCTGGTCGCCGGTCGTAG
TCGCCATTTCTGGTCGATGTTTAGAAACTCCCCTTTTTTCGACTAGGGAT
GAAGGTTTTGTATTGATGAAAAAAATACCCTTGTATTTTTGAAGGAAAAG
GTTTTGTATTGGTGAAGGAAAATACCCTTGTATTTTTGAAGGAAAAGATT
TCGTATTGATGAAGAAAAATAGCCTTGTATTTTTGAAGGGAAAGGTTTTT
TATTGTTGAAGGAAAATTCCTATGTATTCTTGAAGGAAAAGGTTTATTCA
ATTAGGGAAGGTTTTGTATTGATGAAGAAAAAAACACTTGTTTTCTATTA
AATATAAGAATAATGTTTATTGATCAGGGAAAAAGGTTTTTCGTATTGGT
GAAGGAAAATACCCTTGTATTTTTGAAGGAAAATACCCTTGTATTTCTGA
AGGAAAATACCCTTGTATTTCTGAAGGAAAAGGTTTTGTCAATGAGGACA
AAAGGTTTTGTATTGTTGAAGGAGAATACCCTTGTATTTTTGAAGGAAAG
GACGCCGCCTTTTTGAAGGAAATTATATTCTGTGTTTTTTGTCGTTCTTT
GTTAAAAGAGTACTGTGCTTCCGCAAATAAGCTTCGCTGTGCCATTCAAA
GTTTAAAAGTACTGCGAACTTTTAAACCCAAATTTTATTACCAAATCGTC
TACTAATAAACATCAAATTAGGGCTAGTAAAAGCCTAAGCTATTCTATAG
GGCTCATCGGAAGTTGACGCTATTCAGTGAAATATATTGCATGTATAACA
CTCTCGGTTACACCCTATCTACTTATAGCTTCATAAGTTTCACATTGAAA
ATTGGAATCGAAATTGTTTCTTCAATTATTTGGGAAAAGCGTCAAAGAAC
CATCCTTGCTTATTTGACATGTGCATAAATCTTTGAGAGTTAGATCAGAT
TATAACAGATTTTAAATCAATATGAACTAAAAATTGAAAATTAAGAATTA
AGGATTAAAAAAATCATATTATTTCTATTTCTTATTTCTTTGTCATCACA
TGTTTTATCAGGCATTTTCTCTAATTTTAGACGCCGTTAGAGAGCACACC
TCCAAAAACATTTGAAAGACATAATGTAAAACCAAAGATAGCGTTCTCAG
AAGAGGCATCCAATATAAATAAAGAAAAGAGAGTCAAGCCGCATGTCTAC
GAGGAAAGATCTCCCCCCATTCAGAATGATGCTCAAACTAACTTTTGTGA
AGCTTATACTCCCACTGGTTATGCGTTTGACTTCCGAGCGGGTAGCCATT
CAGAAGATTACCAAAGGGCTCCTTTTATCTCAAAAAAGAAGAAAGTTCAA
GACAACCCTTTCTTGAGCAACCCTTCGCTGTATCGTGTATCTAGTGAACC
TTGTCTGCAGAAGAAACGTATTTCAATGTATCCAAAGAATCACAACATTC
TACGAACTTTCACTGTCAAGGAGGAGGAGGTGAGTACTTGATGAGAATTT
GCTTTTCACTGTTTGTTGTATCACTGTTTGTTTTAATGACATGTCTGTTT
TTTCCCTTCTAAAGTTTCTTTATTGGTCTATTATAGGAATCACCTCGATC
AAGTCCCAACAAATTCAAGTCAAGCTACTCCTTGCATTTTGATGAGAAGC
CACAAGAGCAAGGGTCGGCTATCATGAGTGCTCTGTACACTATGAATCGC
AAAAATAGTTCAAGTATAAAATTTCCTTTTCCCAATTCTCTCTTTTATTG
AAATAGACTGAAATCTTAGCTCAACTATGAAATTGTGCATTTGAATTCTT
CAAAAAACCTTTCTTACTTTTGCCGGGGTTCTGTTAGTGTTAAGATGTCT
TATTTTTTTCAGAAGGCAAAATCAGTTGTTTCCAGCTATTGAAAATATTT
CTGTTTAGAGGTCTCTTCTCCATTATTGAAAAATTCCTTTTATTGCGAAG
AGAAGACGTTTCAATACATTCAAACCTTTCTTCCATGATGGCGAACGAAC
TAAACCTAGATGGCCAACCTAAAAAGAAGTTTAAAAAATCACTTTCGCTG
TTGAGATTATGCCAAGCTTTAAAAAATAGGGAAGTTTAGTTATCATCTCG
AAATCTTGCACATCTTGTTTAGGGAGAATTTTTGTCGCAAAACCATGTCT
GCATACGATGTAGTTTGAAATTTTGTTTTTGTTAGGTTCAGTTCATTCAG
CGCTATTTAGCGAATTGGAAGATTCGCATCGCTTCCATAAAAAGGATTAC
GACAAAGGGTAATTTTCATTTCATAAGTGTTTTGTTCTCTCACGATGTTG
GCTTTAGTGATCAATTTTCTTTTTCAACATTCATTTTGTTTTAACAATTG
ATTAGCAATTTATTCAACAAATTTTATTTCATTTCTAGAAATTACGAGAC
GGAGTATCAAAATATTTTTGCCAGGAAGAACTCCAGCCAGGTTCGCACTC
AAAATTGTTTCATAAAATGAAAGTTTACTTTTGAATCCTAATTGAAACCT
TTGGTGTTTTAACGTCTAGTAAGTTTGTAGTTCGATACTGAGGAAGAGGA
GAATATTCTCTCCTATTGGATCATCTGTAATTTTTTTCCTTTGATGCTTT
CTTTAACAGAACAAGTTGGTTTCACCTCTGCTTGAGGCGGTCAAAGACAA
CCAGGAATTCACGGATTATTACAAACAGGTTTGCTTTTTTTGTCGACAGT
TACTCTGCCATTGATGAAGAAAGGGTATTTCATTTACATTTAAGCATTCA
ATCGTCATTTCATTTTAATCTGTATTACTGTTTTTCTTAGGTGTTAAACA
AAAGAATTTACGCCTATTCGCCTTCGATGCGAGAATCGTCAGTGAACACA
TCAAACGACTCATACAGTCCTCCCAACGAAAAGCATTTCTTCGATGAGAA
ACAATCGGAAAAATTTATGGATGATGATATCTCACCGACAACAACACAGC
GTTATTCGAAGGGCCGGTATACACGTGATTATCAACCTGACCTCTATTCG
CCTCGACATGATTAA Coding sequence (CDS) from alignment at sc0000212_pilon:357195..362959- >XLOC_040726 ID=XLOC_040726|Name=XLOC_040726|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000212_pilon:357195..362959- (Clytia hemisphaerica_ch_hm2_pilon)
TTACAGTTTATGTACACAACAGAATACCAAAGGAGTTTTCTTGCTGGCAT
AAACCAACGATCCCCATCAAAAGAGCAGGCAAATAAATTCATCACTCCAA
GATCTCCACCAAGAAGAGGCAGTACTGAAAAATGTTCAATTGGTATACAA
ACAAATGCTGATCACAAAAGAGTTCATTTCAAACGATATTCTGATCGAAG
TCCAATCAACCAATTACAGTTTATGTACACAACAGAATACCAAAGGAGTT
TTCTTGCTGGCATAAACCAACGATCCCCATCAAAAGAGCAGGCAAATAAA
TTCATCACTCCAAGATCTCCACCAAGAAGAGGCAGTACTGAAAAATGTTC
AATTGGTATACAAACAAATGCTGATCACAAAAGAGTTCATTTCAAACGAT
ATTCTGATCGAAGTCCAATCAACCAAACGCCGTTAGAGAGCACACCTCCA
AAAACATTTGAAAGACATAATGTAAAACCAAAGATAGCGTTCTCAGAAGA
GGCATCCAATATAAATAAAGAAAAGAGAGTCAAGCCGCATGTCTACGAGG
AAAGATCTCCCCCCATTCAGAATGATGCTCAAACTAACTTTTGTGAAGCT
TATACTCCCACTGGTTATGCGTTTGACTTCCGAGCGGGTAGCCATTCAGA
AGATTACCAAAGGGCTCCTTTTATCTCAAAAAAGAAGAAAGTTCAAGACA
ACCCTTTCTTGAGCAACCCTTCGCTGTATCGTGTATCTAGTGAACCTTGT
CTGCAGAAGAAACGTATTTCAATGTATCCAAAGAATCACAACATTCTACG
AACTTTCACTGTCAAGGAGGAGGAGACGCCGTTAGAGAGCACACCTCCAA
AAACATTTGAAAGACATAATGTAAAACCAAAGATAGCGTTCTCAGAAGAG
GCATCCAATATAAATAAAGAAAAGAGAGTCAAGCCGCATGTCTACGAGGA
AAGATCTCCCCCCATTCAGAATGATGCTCAAACTAACTTTTGTGAAGCTT
ATACTCCCACTGGTTATGCGTTTGACTTCCGAGCGGGTAGCCATTCAGAA
GATTACCAAAGGGCTCCTTTTATCTCAAAAAAGAAGAAAGTTCAAGACAA
CCCTTTCTTGAGCAACCCTTCGCTGTATCGTGTATCTAGTGAACCTTGTC
TGCAGAAGAAACGTATTTCAATGTATCCAAAGAATCACAACATTCTACGA
ACTTTCACTGTCAAGGAGGAGGAGGAATCACCTCGATCAAGTCCCAACAA
ATTCAAGTCAAGCTACTCCTTGCATTTTGATGAGAAGCCACAAGAGCAAG
GGTCGGCTATCATGAGTGCTCTGTACACTATGAATCGCAAAAATAGTTCA
AGAATCACCTCGATCAAGTCCCAACAAATTCAAGTCAAGCTACTCCTTGC
ATTTTGATGAGAAGCCACAAGAGCAAGGGTCGGCTATCATGAGTGCTCTG
TACACTATGAATCGCAAAAATAGTTCAAGTTCAGTTCATTCAGCGCTATT
TAGCGAATTGGAAGATTCGCATCGCTTCCATAAAAAGGATTACGACAAAG
GGTTCAGTTCATTCAGCGCTATTTAGCGAATTGGAAGATTCGCATCGCTT
CCATAAAAAGGATTACGACAAAGGAAATTACGAGACGGAGTATCAAAATA
TTTTTGCCAGGAAGAACTCCAGCCAGAAATTACGAGACGGAGTATCAAAA
TATTTTTGCCAGGAAGAACTCCAGCCAGAACAAGTTGGTTTCACCTCTGC
TTGAGGCGGTCAAAGACAACCAGGAATTCACGGATTATTACAAACAGAAC
AAGTTGGTTTCACCTCTGCTTGAGGCGGTCAAAGACAACCAGGAATTCAC
GGATTATTACAAACAGGTGTTAAACAAAAGAATTTACGCCTATTCGCCTT
CGATGCGAGAATCGTCAGTGAACACATCAAACGACTCATACAGTCCTCCC
AACGAAAAGCATTTCTTCGATGAGAAACAATCGGAAAAATTTATGGATGA
TGATATCTCACCGACAACAACACAGCGTTATTCGAAGGGCCGGTATACAC
GTGATTATCAACCTGACCTCTATTCGCCTCGACATGATTAAGTGTTAAAC
AAAAGAATTTACGCCTATTCGCCTTCGATGCGAGAATCGTCAGTGAACAC
ATCAAACGACTCATACAGTCCTCCCAACGAAAAGCATTTCTTCGATGAGA
AACAATCGGAAAAATTTATGGATGATGATATCTCACCGACAACAACACAG
CGTTATTCGAAGGGCCGGTATACACGTGATTATCAACCTGACCTCTATTC
GCCTCGACATGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:357195..362959 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 934-1158:226 |
| Aaloc | 865-933:407 |
| Aaloc | 814-864:627 |
| Aaloc | 742-810:829 |
| Aaloc | 613-738:1430 |
| Aaloc | 214-612:1936 |
| Aaloc | 1-213:5766 |
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