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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000055_pilon:1482064..1484520+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040724 ID=XLOC_040724|Name=XLOC_040724|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2457bp|location=Sequence derived from alignment at sc0000055_pilon:1482064..1484520+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAACTACTAAGGGACATCATTGTGCAAGCGATTGACAACAAAGC
AACAGAACTTAAAGATATCAGCGACGAATTATGGAAAAACGCCGAAGTAG
GTTTCGAAGAAACAAACGCTAGGAAAGTAATAACCGAATTCCTTCGAAAA
GAAGGGTTCGCTGTTTCGGAGAAGTTGCCCGAGGACAACCGATTAAAAAC
GTCCTTTGTTGCAAAGTATGGAAATCCGGATGGATTGAAAGTTGGTCTTT
GTTGCGAATACGATGCATTACCTTTTGGCGAAACAGAAGAAGGGGAGGTG
AATTATGAACATGCTTGCGGACATAATCTCATTGCTGAAGCGGGAATTGG
AGCTGCATTAGGTGAGAAGTAATATACCTTTTCGAACGTAGTCGCGTGGG
TacttttttgtcctttttatCCCACTGAAACCGtgccaatccttttttga
cgtatttttctattgtctataggtgcgaaaaaaggactggggtGGTTTTG
GTGGGATAAAGCGGGCaaaaaaaTGCCCACGagactacagtcgaaaaggt
gtatacaatATTTCTTTTCTCATAACATCTTAAGAGAAAACCACGAAACC
ACAACGGCCCTTTATTTTTTCTGTCGTATAGTCCCTTCTTTGAATCACTC
GAAAACACCCATTGAAGAAATCGGTTTTACGGCATGACTGATAAGAGTTC
TGAATCCTGGGTCGAAGACTTCGGAGGTTTTTAGATAGTGGGACTTTCTA
ACATTAAATAAAAGTAAACTAATTTCCTCCTTTATTCCATAGGCTTGAAA
GCTGTGTATGATGCGAGCAAACATATGAAAATGCAAATTATTGTTTACGG
TACGCCCGGCGAAGAGAATGGAGGTGGAAAAGTCCTTATGATTAAAGAAG
GACTTTTTGATGAAGCAGATATTTGTATCATGGCACATCCAGCACCTGCT
GAAGTTGCAGGAGCTGTTACGCTGGCCAATATCAAGATGATGATTCAATT
TAAAGGTGAGTTTATACATTTGGCGAAATGGCTTTGTAGCTTCGCAAGAA
GGCGAAAAGTTAgtgtaaaaaatcaaattttttgttaCTCAACATGTTCA
GACAGTATGCGCAGTTTCTTCTAGCTATTaaaatacccctgtctcacagc
cccggtgaaacttttccctacagcggggataaaaattctattgttccaag
gttaaaaaatccagtggggatggttttggagtgcaatttctaaacaatga
atttcgaatgggaatGACACACGGGTGTATTAAAATACGACCAGATTATT
CTTCACTAACTACTGGTATGGAAAGTCAAATTTTTAACAAAGTAAATAGT
TCTATtattgtttatctttttcaggAGCACCATCTCATGCCGCCCTGGCG
CCCTGGTTAGGTAAAAACGCACTTGATGCATGTGTATCTTGTTATAACAA
TATTAGTATGTTGCGACAACAATGTGAGCCAATAAACCGGATTCATATCA
ATATTACGAGAGGCGGAGATGTCATTAATGTCATTCCCGATTTCGCGGAA
ATGAAAGTTATGATCAGATGCCCAGACTTGGATAAGTGTGATGAGATTCG
CCAACAAATTATGCAGTGTGCGGAAGGAGCAGCTGCAGCGACaggtaaaa
aatctaaaataaatgcTCAGCTGTACCATTTTATTCTCGCAAAGTCGTCC
TTTTAACTTTGACAGTTTCCCAGCTTTTTACCAagaaaagtatcaaaaat
aaaatactttcttaCATTATTTTATTCTTACATCTAACGCTCCCTAAAGC
ATCGACGTAAACAAGATtgacaaaattctaaaaatcagTAGCAAAATGGA
TTGAGTCAGAGGAAACAACatattctgaaaagaaaaaaaagtactACTTC
AATCTTGGTTATATCATAAGTGAATTGATATTTTAAGTTgatgttaaaaa
catttaaattattttatgataatgcacatttttaagcttaaccAAAATAT
ATCTTTTCACATATATATTCACACAGGTTGCGAACCACCGCATTTTGAAG
ATACAGGAAACGGTATCGACtctgtcaaaacaaacaaagtatTGATTGAT
CTCTACAAGAAACATGCTGAAAGTTTCGGAAACGTATTTCTCAGTGATGA
AGAAGCCAGTGGGATGAATGGCTCAACTGATATGGGAAACGTCACACATA
AAGTGCCTGGCTTTCACCCCGGTTTTAAGATTTATACAGGTGAGGAACAG
GCGGTGAACCACACGCACGGTTTCGTTAAGTGGGCTGGGCACGAAGATAA
TCAGAAACCCACTTTGATAAATGCTAAATGCTTGGCGTTGACCGCTGTTG
AGGTTGTGGCCAATCCAGATCTTTTTCAACAAGTGAAAGATGAATTCGAA
GCTGCTAAGAAAGATAAGAAAGTCATGAAGGCAACAGAACTCTGGTGCAC
TCACTAA Coding sequence (CDS) from alignment at sc0000055_pilon:1482064..1484520+ >XLOC_040724 ID=XLOC_040724|Name=XLOC_040724|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2550bp|location=Sequence derived from alignment at sc0000055_pilon:1482064..1484520+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAACTACTAAGGGACATCATTGTGCAAGCGATTGACAACAAAGC
AACAGAACTTAAAGATATCAGCGACGAATTATGGAAAAACGCCGAAGTAG
GTTTCGAAGAAACAAACGCTAGGAAAGTAATAACCGAATTCCTTCGAAAA
GAAGGGTTCGCTGTTTCGGAGAAGTTGCCCGAGGACAACCGATTAAAAAC
GTCCTTTGTTGCAAAGTATGGAAATCCGGATGGATTGAAAGTTGGTCTTT
GTTGCGAATACGATGCATTACCTTTTGGCGAAACAGAAGAAGGGGAGGTG
AATTATGAACATGCTTGCGGACATAATCTCATTGCTGAAGCGGGAATTGG
AGCTGCATTAGATGAATCAACTACTAAGGGACATCATTGTGCAAGCGATT
GACAACAAAGCAACAGAACTTAAAGATATCAGCGACGAATTATGGAAAAA
CGCCGAAGTAGGTTTCGAAGAAACAAACGCTAGGAAAGTAATAACCGAAT
TCCTTCGAAAAGAAGGGTTCGCTGTTTCGGAGAAGTTGCCCGAGGACAAC
CGATTAAAAACGTCCTTTGTTGCAAAGTATGGAAATCCGGATGGATTGAA
AGTTGGTCTTTGTTGCGAATACGATGCATTACCTTTTGGCGAAACAGAAG
AAGGGGAGGTGAATTATGAACATGCTTGCGGACATAATCTCATTGCTGAA
GCGGGAATTGGAGCTGCATTAGGCTTGAAAGCTGTGTATGATGCGAGCAA
ACATATGAAAATGCAAATTATTGTTTACGGTACGCCCGGCGAAGAGAATG
GAGGTGGAAAAGTCCTTATGATTAAAGAAGGACTTTTTGATGAAGCAGAT
ATTTGTATCATGGCACATCCAGCACCTGCTGAAGTTGCAGGAGCTGTTAC
GCTGGCCAATATCAAGATGATGATTCAATTTAAAGGCTTGAAAGCTGTGT
ATGATGCGAGCAAACATATGAAAATGCAAATTATTGTTTACGGTACGCCC
GGCGAAGAGAATGGAGGTGGAAAAGTCCTTATGATTAAAGAAGGACTTTT
TGATGAAGCAGATATTTGTATCATGGCACATCCAGCACCTGCTGAAGTTG
CAGGAGCTGTTACGCTGGCCAATATCAAGATGATGATTCAATTTAAAGgA
GCACCATCTCATGCCGCCCTGGCGCCCTGGTTAGGTAAAAACGCACTTGA
TGCATGTGTATCTTGTTATAACAATATTAGTATGTTGCGACAACAATGTG
AGCCAATAAACCGGATTCATATCAATATTACGAGAGGCGGAGATGTCATT
AATGTCATTCCCGATTTCGCGGAAATGAAAGTTATGATCAGATGCCCAGA
CTTGGATAAGTGTGATGAGATTCGCCAACAAATTATGCAGTGTGCGGAAG
GAGCAGCTGCAGCGACaggAGCACCATCTCATGCCGCCCTGGCGCCCTGG
TTAGGTAAAAACGCACTTGATGCATGTGTATCTTGTTATAACAATATTAG
TATGTTGCGACAACAATGTGAGCCAATAAACCGGATTCATATCAATATTA
CGAGAGGCGGAGATGTCATTAATGTCATTCCCGATTTCGCGGAAATGAAA
GTTATGATCAGATGCCCAGACTTGGATAAGTGTGATGAGATTCGCCAACA
AATTATGCAGTGTGCGGAAGGAGCAGCTGCAGCGACagGTTGCGAACCAC
CGCATTTTGAAGATACAGGAAACGGTATCGACtctgtcaaaacaaacaaa
gtatTGATTGATCTCTACAAGAAACATGCTGAAAGTTTCGGAAACGTATT
TCTCAGTGATGAAGAAGCCAGTGGGATGAATGGCTCAACTGATATGGGAA
ACGTCACACATAAAGTGCCTGGCTTTCACCCCGGTTTTAAGATTTATACA
GGTGAGGAACAGGCGGTGAACCACACGCACGGTTTCGTTAAGTGGGCTGG
GCACGAAGATAATCAGAAACCCACTTTGATAAATGCTAAATGCTTGGCGT
TGACCGCTGTTGAGGTTGTGGCCAATCCAGATCTTTTTCAACAAGTGAAA
GATGAATTCGAAGCTGCTAAGAAAGATAAGAAAGTCATGAAGGCAACAGA
ACTCTGGTGCACTCACTAAGTTGCGAACCACCGCATTTTGAAGATACAGG
AAACGGTATCGACtctgtcaaaacaaacaaagtatTGATTGATCTCTACA
AGAAACATGCTGAAAGTTTCGGAAACGTATTTCTCAGTGATGAAGAAGCC
AGTGGGATGAATGGCTCAACTGATATGGGAAACGTCACACATAAAGTGCC
TGGCTTTCACCCCGGTTTTAAGATTTATACAGGTGAGGAACAGGCGGTGA
ACCACACGCACGGTTTCGTTAAGTGGGCTGGGCACGAAGATAATCAGAAA
CCCACTTTGATAAATGCTAAATGCTTGGCGTTGACCGCTGTTGAGGTTGT
GGCCAATCCAGATCTTTTTCAACAAGTGAAAGATGAATTCGAAGCTGCTA
AGAAAGATAAGAAAGTCATGAAGGCAACAGAACTCTGGTGCACTCACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000055_pilon | genome | sc0000055_pilon:1482064..1484520 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 847-1275:2029 |
| Aaloc | 577-843:1377 |
| Aaloc | 364-573:795 |
| Aaloc | 1-360:1 |
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