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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:537939..539635+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040716 ID=XLOC_040716|Name=XLOC_040716|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1697bp|location=Sequence derived from alignment at sc0000146_pilon:537939..539635+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTACCAAAAGAGAATGTTACTTTAGTAAAGCTAAAGAGAATGTTGAC
GTAAGTTTCTTTaacttcattatttttcaattttgaaataataatcATTG
GGTCATCAAaagcatttttgaaaagttttcaaaatgggAGTTTTCCTAAT
TTTAACACAAATTTTAAGATAGTAGAATCTTTGAAATATGGATTTGTCAG
GTGGACTAGAGTTCTTTGCTGATTAGATTCTTTTGCGAATTGAAAACGCA
GCATTAATGATGTCATTCTTTTTCGACATCGTAGGGAGGCTAAATTACAG
AAAAGCGGACCCTTAGAAAGAGTTCTTCACATAATTATTATTAATTAATC
TGCAATTCAatcaacaattttcaaattttagatcccccttttttcttgat
ttgataGATTCTTTAAGACCCTTGATGAAAACGgggagtttttttttctt
aatgacttaattacaaaaatcttccctttttcaaaaagaaatttttttac
tcCCCCCTTATTTTATGCAGAAACCATGGTAATTTGACAGGGAAACAAAT
AGGTGGCTTGTACGAAAAAATGGGCATGATCTAAAAAGTGTCTTTTTTCC
TGTTGTAGTGAGCAAGTTGGCATTAAAAACATTGCAAATCAGCTTGGTTG
GTCTGACTTTGACCTTCATATTTCCCGAAGCAAAAAGAGTTTGAGTGGTG
GTGGAAGCAATTTATTCGCAATGGGCACGGATTTTCAAATCCGGTTGGAA
TTACCAAGGATAATTAATGGCGACGACAAGCTTAATGGTATTACCATGAT
TTCATTCttttaacccttcgagcatcttcctatttttttaatatGGGATG
CATCTTGGGAGGGGCCTTATAATCTCAAGATTGACGAGTGCTATGACCTT
GAAATTCTGATCAGTGGTAGATGTGGATAATTGAAGATGATTTCCAAAGT
TTAGTTAGGCCACctgtctggttggtattttatagaccagaatgtaaact
tgaccataatattgactaaaattttcaccaaagataaCAATTCATATTCG
GTGCACACTTTCATAATTTTAAGTCCATTGactaaagatttcaaaaagtt
attaaaaaagtTCGTTTGGAGGCCTTTTTGCCCCGCCCCCCAGATGGTCA
AATGATTAATCCTTATCAATTGTCTATCACTTTTGTGCTGCCATTTTAAA
GGTGTCCTTATAGCTTCACGGCTAGTGAGCTGACTTTCATTTTTCCATTC
TCTTTTGCTTTCAGTGAAAGTATATCCCATCGAAGCTAGATTCAGAGCCA
ATGCTCCATCCATCTCAATCGAAGTAATTAATGGTACAAAAACTCaacca
gaaacatcaaaaattgtgAGGCGAGAGAGAAAAGACAAAATGGAGCATAT
CGACGTACTATTCCTAAAATCGGGTAAGTATTTAAATTGAACACGCGTTA
TCTTTCTTCAAGTTGAAATTTTAGTGATGAAGAAATACTTCCCGTttcca
aaaattattgaaatacaTGATAAAAGTGAGGCTTGTGATTTactgtaaca
aaattttaagaaacattttaaaaattgacgCTTCATCTATTTTGACTTTC
AGAATTTGCAAAACTTTCAGACAGCAAACTTGAGGCTTCTTCAGAAGGAA
GAACAGTAAAACTCAAAGATAAGCATCGGATATGGCCTTGGAACGTC Coding sequence (CDS) from alignment at sc0000146_pilon:537939..539635+ >XLOC_040716 ID=XLOC_040716|Name=XLOC_040716|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=966bp|location=Sequence derived from alignment at sc0000146_pilon:537939..539635+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTACCAAAAGAGAATGTTACTTTAGTAAAGCTAAAGAGAATGTTGAC
ATGGTACCAAAAGAGAATGTTACTTTAGTAAAGCTAAAGAGAATGTTGAC
TGAGCAAGTTGGCATTAAAAACATTGCAAATCAGCTTGGTTGGTCTGACT
TTGACCTTCATATTTCCCGAAGCAAAAAGAGTTTGAGTGGTGGTGGAAGC
AATTTATTCGCAATGGGCACGGATTTTCAAATCCGGTTGGAATTACCAAG
GATAATTAATGGCGACGACAAGCTTAATGTGAGCAAGTTGGCATTAAAAA
CATTGCAAATCAGCTTGGTTGGTCTGACTTTGACCTTCATATTTCCCGAA
GCAAAAAGAGTTTGAGTGGTGGTGGAAGCAATTTATTCGCAATGGGCACG
GATTTTCAAATCCGGTTGGAATTACCAAGGATAATTAATGGCGACGACAA
GCTTAATGTGAAAGTATATCCCATCGAAGCTAGATTCAGAGCCAATGCTC
CATCCATCTCAATCGAAGTAATTAATGGTACAAAAACTCaaccagaaaca
tcaaaaattgtgAGGCGAGAGAGAAAAGACAAAATGGAGCATATCGACGT
ACTATTCCTAAAATCGGTGAAAGTATATCCCATCGAAGCTAGATTCAGAG
CCAATGCTCCATCCATCTCAATCGAAGTAATTAATGGTACAAAAACTCaa
ccagaaacatcaaaaattgtgAGGCGAGAGAGAAAAGACAAAATGGAGCA
TATCGACGTACTATTCCTAAAATCGGAATTTGCAAAACTTTCAGACAGCA
AACTTGAGGCTTCTTCAGAAGGAAGAACAGTAAAACTCAAAGATAAGCAT
CGGATATGGCCTTGGAACGTCAATTTGCAAAACTTTCAGACAGCAAACTT
GAGGCTTCTTCAGAAGGAAGAACAGTAAAACTCAAAGATAAGCATCGGAT
ATGGCCTTGGAACGTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146_pilon | genome | sc0000146_pilon:537939..539635 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 391-483:1605 |
| Aaloc | 232-387:1267 |
| Aaloc | 52-228:610 |
| Aaloc | 1-48:1 |
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