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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1186458..1189855- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040704 ID=XLOC_040704|Name=XLOC_040704|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3398bp|location=Sequence derived from alignment at sc0000034_pilon:1186458..1189855- (Clytia hemisphaerica_ch_hm2_pilon)
AATACAAACCACAAAAAATGTTTTTCAGTGCATTTATTTCTTCAATTTCA
GTCACAATAAAAAATATACAAATAACTATGGCTTCCAATGACGATCAAAT
AAAAGAACTTTTCCAAGCGGCTGATAAAAGTGGTGACGGAAAAATCTCAA
CCAGGGAACTCGGTAAAATGTTCAAATCAATCGGTGTGAAACTTTCCGTA
AAAGATGTCAAGTCGCTAGTCTATAAATTCGACGCAGACGGGAGTCGAGA
TATTGACTTGAATGAATTCCGCGCGCTCATCGCGGACGTTTTGAACGCGA
ACAAACAATACGAAGAAGCGTACGAAGTGTTCAAGATTTTCGATCAAAAT
GGTGATAACACGATCACAGTGGAAGAAGCGAAACGCGCATGCGCTAATCT
CCCTAAACCGTTGAGTGATGATGAATTTGTTGAATTCATGAAACGTTTAG
ATGCTGATGGTAACGGAGTCGTTCTTTTTGATGAATTTGCAAAAGCCTAT
GCTTGCGGGTTATAAAAAGTTGCTCTAGTTCTACCGTCCGACATTGTGGG
TTCAATTTGACTGTATCTCCTTTGTAAGATGGAGGAAAGATCTTGACAAA
CAATACTTTGGTGGTTACGAGCAAGCTCCTTCCAAGAGCATAATCATCAT
GTGAATTTTGGGTTTTTGGGACAAAGATAGTTATCTTAAGGGAAGAAATT
TTGGCGGATTTGGGGGATTTAATCAAAATCCGTGAAATTAAGATCCCGCC
AGATTAAATTTTTCAAGCCATCCGCTGAATTAAATTCCCTCTGAATGTGA
AAAACTTTTTCCTCTGTCCGCAAAATTAAATCCCTGTCAGAATTTCTTCC
CTATTATTTATTGAATTAATTAAGTTAGGGAGATTTTACTTACCTAATGG
GATAATTTTTATGGATGATGATTTATATAATTTGAAAATTAATAATATGA
AAAAGAAATTAAAAAAAATTCCCACATTTTTATGGTTCCTCTACCGGGTG
CGGCACAAAAGAGTTTCTCGCTATATTATGATCCTTATTGGACCATTTTT
GAACATTTGGATCCTGAGATCCTGAGATCCAAGTCTCAAGTCTCATGTTA
AAACTCTACCCTTCCAACCTACTTTAAAGCACTTACAAATCGATAGTGGT
TTCAAAACTTCCCGGTGGATTTCCCTTTTTTTTCAAATATTACGACCATG
ATTGATTGTAGATCAAAAGTTATCCTCAATTGAATAAAATAGTTACTTTC
AGAAAGTGCCTGAAAATGTTAAAAATCTACCTATCGTCGGAAATCGTCAT
TTTTTCATATTTCCATCACATTTTTTCAACTTATTTAATCGTTTCTTTAC
AGAAAAAGGTTCTTTATGATGATGCCCAAAACTTAACATGGTTTGATTTC
CAAAAAAATCATTCTTTGAACCCGAAACTCCTTAAAAATCGCCGGAACAG
CCAAAAACCGGCGTAAAACGGGGTTCCCTCGTTATACTCGACAGATTTTC
ATGGTTTTTTGCACAATGATGTAAAATAGCAATGCCCAAAATGTGATGGA
GCACACAGAACCGGACGGAAATGTCCCGAAAAAGGTGTTTTTTTGAAATT
TTCTCGAGATTTTATCATTAGTTTTTTGTTCATAGATGCACATTAGTAGT
ACTACCGAAAAGGTGTCGAAAACCGTTTACCGAATTGAAACATCCATATG
AGAGGACAGTAATTGAAGTGGCATTTAATGAAAGCATTCATTAAGCGTTT
CTTTTTTTTAAACTGAGATATGTGCTCATTCTGGCTAAGGCGGTTATTTT
CAAACTAGTTTTCTTGCAAAGATTTTCCATATGCGATTCAAACGAGATTA
TCGAAGGTTAATCCAAGAATCTTGGACATTTGGTATTGAAAACAATTTCT
TCTCTAATATTTAGATAGAGCGAATCGTCAATGATATTAATTATTAGCTG
ACCTTTGTCAGTATTGCCAACCATTTGATTAATTGCCATGTAAAGATTTT
TTCTGCTTTATGCTTGTGCCCTTAATTCTACAATGTCCAAACGGCCATCC
CCTTTTTCCAGCGTTGGGTTCCAGATTCTATCCCAAATACAAATTTATTG
TTATCAGAGAGACAGTTTTCCTTGTCCCCGTGACAACATGTTTCATTGTT
TAGGTGTTTTTATTTGACTTTTGAGAACTAAAGTTAAAATTTCGAGATGG
CGGAATCCTTCCCTCTACTTTACTGGACTCAACGTCATCAAAATGGGCGC
TGTGGTATAGTGGTCATTGACCTTGATTGCTGCACAGGCGACTGAGGTTC
GATTCCCACTCGCAGCAGTTCACGCGGCAAGTGAATGAACCTTCGCCCGG
GTCAATTCATGCCATGTGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGA
CGGGGCGCTAATTGAAAGCGTCTATAGTTACGAAAATGGGCCTCTAAGCC
TCCTGCGACTCAACCAAATAGAAATAGAAATAGAAAAAAATATATTCAGA
GATCAAAGTTCAGTCAGATGTAGATTCTAGTCTCCCCAGGTGCGCTGTAA
AAGGAAAAGAAGTTAAAGAAATAAATATTAAAAGTTAAACAGAAACGGGA
ACTAGTAACAGGATAAATTTCTAATTGAAATATGCCGGTTCAAAAGCGAT
TTGAAAGTCAAAATTGTTCGTTTCAATTCGTTAGAAAGAATGACATGAAA
TATCCCAGATGGATGTAGTTGAATTCGCGAATGTTAACTTTTGTACTTTT
GTTACTTGGACCAATATCGTGTCAATTTTTTCTTTATTCGATAATCTGAG
CAAATGTCTTCTTGGACTGCTCTTCTCACTTGCAGACTTAGGCATCAGTT
TTTTTTACACTGTTCACTTTTTCTTTTACATAGAATACAAACCACAAAAA
ATGTTTTTCAGTGCATTTATTTCTTCAATTTCAGTCACAATAAAAAATAT
ACAAATAACTATGGCTTCCAATGACGATCAAATAAAAGAACTTTTCCAAG
CGGCTGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAACTCGGTAAA
ATGTTCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGTCAAGTCGCT
AGTCTATAAATTCGACGCAGACGGGAGTCGAGATATTGACTTGAATGAAT
TCCGCGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAATACGAAGAA
GCGTACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAACACGATCAC
AGTGGAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAACCGTTGAGTG
ATGATGAATTTGTTGAATTCATGAAACGTTTAGATGCTGATGGTAACGGA
GTCGTTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGGGTTATAA Coding sequence (CDS) from alignment at sc0000034_pilon:1186458..1189855- >XLOC_040704 ID=XLOC_040704|Name=XLOC_040704|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000034_pilon:1186458..1189855- (Clytia hemisphaerica_ch_hm2_pilon)
AATACAAACCACAAAAAATGTTTTTCAGTGCATTTAATACAAACCACAAA
AAATGTTTTTCAGTGCATTTTGCATTTATTTCTTCAATTTCAGTCACAAT
AAAAAATATACAAATAACTATGGCTTCCAATGACGATCAAATAAAAGAAC
TTTTCCAAGCGGCTGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAA
CTCGGTAAAATGTTCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGT
CAAGTCGCTAGTCTATAAATTCGACGCAGACGGGAGTCGAGATATTGACT
TGAATGAATTCCGCGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAA
TACGAAGAAGCGTACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAA
CACGATCACAGTGGAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAAC
CGTTGAGTGATGATGAATTTGTTGAATTCATGAAACGTTTAGATGCTGAT
GGTAACGGAGTCGTTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGG
GTTATAATGCATTTATTTCTTCAATTTCAGTCACAATAAAAAATATACAA
ATAACTATGGCTTCCAATGACGATCAAATAAAAGAACTTTTCCAAGCGGC
TGATAAAAGTGGTGACGGAAAAATCTCAACCAGGGAACTCGGTAAAATGT
TCAAATCAATCGGTGTGAAACTTTCCGTAAAAGATGTCAAGTCGCTAGTC
TATAAATTCGACGCAGACGGGAGTCGAGATATTGACTTGAATGAATTCCG
CGCGCTCATCGCGGACGTTTTGAACGCGAACAAACAATACGAAGAAGCGT
ACGAAGTGTTCAAGATTTTCGATCAAAATGGTGATAACACGATCACAGTG
GAAGAAGCGAAACGCGCATGCGCTAATCTCCCTAAACCGTTGAGTGATGA
TGAATTTGTTGAATTCATGAAACGTTTAGATGCTGATGGTAACGGAGTCG
TTCTTTTTGATGAATTTGCAAAAGCCTATGCTTGCGGGTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1186458..1189855 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 58-543:487 |
| Aaloc | 22-54:3399 |
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