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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:305399..313490+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040691 ID=XLOC_040691|Name=XLOC_040691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8092bp|location=Sequence derived from alignment at sc0000350_pilon:305399..313490+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAATATAACCTTAACACTGCTCTTTGTAATTCTTAGTTTCTCATC
ACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAGCATGTGGATGGCA
AAACATTACCTGAAACTGACCTTCTCCATAACGACACAGAAGTGATAACA
TCCATCAGTCGAATTCAATGTGCCTTGAgatgctCAAGACAAAAAACCAT
CTGTCAAACGGTTCTATATGATGAAGAGAATCGAAAATGTATTTTACAGA
CTGTGAATTCGACACAAAAATCACACGGATACAATACATGGAATACACTC
CAAATACTAAAAGGTTAGTTTAGTAAGTCATATAATTAACAATCATTATT
TATTTGATATAAATGATGCCGTGATGAAATGGAGTATTTCCTAGAAATTC
CATTACTCCTTCGCCAGATAGCTTTTAAGTTGATTCCATTTTAGGGGAAC
ACCCGCTTTTCAATTGCTATGAATAGCTAGGGTAGATTGGGCTTTTCCAG
AAAAAAACCGTATACCCCCTGTTGAGGAGGTCTATTTCCGTTCCAAGGGG
GTAAGATTTGATAAGTGGCAGAATTCCATAGGGTGCAAAAATCTGTAAAA
ATAACTGGAATTCCATGAGGGTGTAGCTTTTTAAATCCTACTAAAATTCA
GAATTCCAGAGGGGTTTAAACCTGAAATCGCCTGGAATTCTAGGGGGTTA
CACCTTTTATAGTCACAGACGGATGGACCTTCTCAACAGGGGAGTGTCTG
CATTTTCTGGTACACAGCACGTGGCATTAGTGTTCATAAATTGATGCATT
GATGCGTACGGGAGGAAGTTGTTGGGCGATTTCTGTGAGGGAATGGATCA
GAGAACATTCTGTTTGTGGTTGTGCTCTCGTGGAATGAAATACAAAGGGG
ACGAGGTTGAGTTTTTAGCTGTTATTTGATTTGGTTGGTTGTTAACCAGT
AATAAAACAATTTTGTTATATTTTCTAAAGAACGCGTCATTTTTATTAGT
TCAAATGAACAATTATTAAAGTATCTTATAAAAACTCCACCTCATCTGAT
ACAAAGATTTGGATCGAGAAATTTGTCATTCGAACGTGAACCAAACCTCT
TTTAAAGGATTGATTTCATTCATCATTAAAACCAGTAAAATGGAGGGTGA
TTTCTCTCTTTTCTaaaattatgttttgctttatttttcaatgctttttt
ataaaaaaactaatacGAATTGGGTGCACCTCTATCACTTCTAATCTCGA
ACCAAGAGCAAATTTCACAACTTTCGACTCCACGGATGGGCGTAGGTACA
ATCGTTTCGCGAGTGCTGCCAGAATCTAAAAGAAACGACGCATAAAGGTT
TCGAGTTTGTCTCATTTTTAATTATACCAACAATTCATAATTTGATTTAT
ATCTGATTTGTACTCCCTCAATAAAAATGTAATTATACTTTTGTCAAAAA
AGGGTTCCTCTTAAGCAGAACAGTAGAGTTTTTGTGTTAGCTATAAAGCG
TGGTGTCGAAACTAGGAAAACAGCAAATAccccccccTAATGACGTCCTA
ACTACACTttgttcagttttttttcaaaaaaaaatacttttgcgAAATTG
ATGGCTAGTCAATTTTCGCTGATGTCTTCCCGTAAAAATCTATAAGGCCA
CTCGAATCCATTCAATTCAAATACTTAGACCTACAAAATATCGCGAGAAC
AATTTTTGTAACTTGAGGAAAATATGCTTCGCACAAGTAAATTTCAAACA
AGAAATGAATAATAGCATGTCAGGAAAGCTTTGACGGCGTACGACGTCTA
AAGGCAAGAGCTTTTTCCAATGCATGATGTTGGGAAAGGAAACACTTGTT
TCAGAGTCCAAAATAATCATAATCATAGTGCTTTTCAGGTAAAAAGTTAA
ATTAACAGCGCTACAAGTTACTTTCAAAACATGCTTAAAAGCTTTTGGAA
GAGAATACGCGTCAAGTGAATTGTGCTCGTGGCCCGGATTCATTGGAATT
GATCCAAGGTTACGCACCCAAAACAAATTTGCGGCCATCAGAAAATGTCT
GCAACTTTGTCTTGGTAGCAGTTTAGAGGATTTCATAAATTTGATCAACT
TACTTACAGTCGAAATATAAACAGTCAATGTTGTTGGGAATCTGCAATGC
GCTTTGCAGTCCGAATGCTCAAAAAGCGTTTTGGCCGACAACCCCATCTC
CATCATACAGGTTGAAGCAAAAACAACAAGAATGTTGTTCGTGCTCAAAT
TGCCAACAAGTCATATTGCAGTCCCGTGAAACGAGGCATTCTTTCTCTGG
ATCAAGTTTCGGACGCGATACTTTAATGATCTGGATGAGAAACTTTAAAA
GATTCAGCGATATTTCCACAACTTTCGAAGATTCCTGCCACGTGAAGTAC
CCAGCATCCATCAAAATTGGCGGAGGTCAAATTTGGTCCGAAATCTACAG
taaaattgccggtaccgagtACAACATTATGGGAGCTTTGGCACCAGTTG
TTTCTGCAGCAGGTGGCTGGTTACAAGGGAGTGGTTTATCTCCTTTATCT
CGTCAACATGGTCTTGGTGTTGACAATGTGATCAGCTTCAAAGTGGTTCA
ACCAAATGGATGTGTTGTCACAGCTGATGCATGTCGAAACAAAGATTTGT
TTTGGGCGTTACGTGGTGGAGGAGGCGGCACTTTTGGCGTGGTTGTATCA
ACACAATATCGTCTCTTACCCAAGAAGCCTATTACTTTTCTCGCATTCTT
TTTATCTCCCGTTGGAATTCCTTTTAAAGTTTTCCTCCATATGGCACATA
GTTTTATGGATTTTTGGGCTGTAAAATCAACAACGCTTGACAACCGAGGG
GTGGATTATGGAACGGCACCTCACTGCAATTACTTTTCGAAGGAGAACGG
AACGAAGCAAATTGCACCCTCATTGAAGAGCTCAATGCTTGGAAGAATAA
GTTCGACAAAGCCTACCATAATAATATCTTCATCGTAGTGCAAGATTTCC
CTGGTATTTCAGAAGCGAATGTCATACTTGGTCAGTTCCTTCAACTCGAT
AATACCGAAGGAGCCACGTTTACGCGGGATATAGCAAATCGTTTAATCCC
AAAGAAATGGATTGAAAAGAATCCCACAAAAGCTGCTGATCTTTTGAAAG
CTCTTTTCCAAACCACACTGGAGACTGGAGCAATCACTTCAAATTATATC
TTAGGTGGAGTTATCAGTGAAGTTCCTCATAAAGCTACTGCTGTCAGTCC
GAAAATTCGAGAAGCGCTCTGGCAGATTGGAACTTATGGAGACCCTCTCC
TGAAAATTATCGATCGAGAATTTCCAGGACTAGGATCAGGCTACAACCAT
GGCAGCAAAACGGAGCCCGATTGGCGCAAAAAGTTTTGGGATTCGAATCT
TTCTCGATTACAAAGATTGAAAAGGAGGTTTGACCGTTGCGACCGTTTGA
ATTGCTGGCATTGTATTGGGTATAAAGGAACTGAGATttaaatgattgaa
aaactATTGAAAGATTTATATGGATTTATATTTGAGTTTCTGGAATCTTA
TTTTACTACTACTACTTTATTTCGACTGATTATTGACCGTCAAATTTCCT
AATTCATAGGCTAgtgatttttttagttttctaaattttattcaaaattt
tctaaaatacaAGTAAAAACAGAAGAAGTGACTTTTTGGTATTAAAAAAT
CCCCAAAACTTTGTGCTGCTTTCGTATAGGCTCagagagagagaagagaa
gagaagttataagttaaatattaaaggaaaaaagagaaaaaaaaaaccga
caaaagactcaaaagtttttttcaacagGACTGTCCAGTTACTGTTAAAG
ATTGCAGTAAAAAATGATAACAGGTAAATTTTACGGATCTAATTTATCAT
CAATGCAATtaaaaaaCctttcctaattatCTTAAAAAGGTAAAATGATC
TTTACATAACGTCTCGAttaattaaaagaaattgttaaaaatagtTGGTA
TAtacaaaaattgccttttaagcaaaaaaGCaaaCaactacaatAAAAGT
TACAAAGATTTGATAGtttcatattttcaaacatGCAAAACCAATagttt
ttcaatcatttaaaACTCAGTTCCTTTGTACCCAATACAATGCCAGCAAT
TTAAACGGTTGCAACGGTCAAACCTTCTTTTCAATCTTTGTAATCGAGAA
AGATTCGAATCCCAAAACTTTTTGCGCCAATCAGATTCCGTTTTGCTGCC
ATGGTTGTAGCCTGATCCTAGTCCTGGCACCAGTTGATCGATAATCTTTA
AAAAGCTGTCATCGAAAGTTTCAATCATCCAAAGGCTTCTCTTATTTGGA
CTGACGCCTTCTGATGAGAACGTTGCTTACAGCACCACCTAAGATATAAC
TAGACACGAATTTTCCAGTTTGAAGAGTCTCTTTAAAGAGACGTTTGAGG
ATTCCTGCAGCTGCTTGTGGGTTCTCTTTGATCCATTTCTTTGGAATCAA
ACGATTGCCAATATCCTTTGTAGAAGAAGCAATTGCTGTATTATCGAGCT
GAAAGAACTGTGCGAGAGCTATGCTGGCTTCTGAAACCCCAGGAAAGTCT
TGTAGCAGTGTGAAGATGTTCTGGTGAAAGGCTTCGTTGAATTGACTCCT
CCAGGCGAAGAGGTCGTTAATCAGTGTAGCTTCAGCTTCCTTTCGATCTC
CTTCAAAGAACAATGCAAGCGAAGTACCGTTCCATAAACCACCCCATCGG
TTGTCAAGTATCGCCGATTTCACCGTCCAAAAGTCCATAAACCTGTGCAC
TATTCTCAAATATTGTTCAAAAGGAATTTGGATTGGAGAAAGTCCAAGTG
CAAGAAAAGTGATTGGCTTCTTGGGTAAGAGACGATATTGTGTTGATACA
ACCACGCCAAAAGTACCGCCTCCTCCACCACGTAACGCCCAAAATAAATC
TTTGTTTCGACATGCATCAGCTGTGACAACACATCCATTTGGTTGAACCA
CTTTGAAGCTGATCACATTGTCAACACCAAGACCATGTTGACGAGATAAA
GGAGATAAACCACTCCCTTGTAGCCAGCCACCTGCTGCAGAAACAACTGG
TGCCAAAGCTCCCATAATGTTGTACTCGGTACCGGCAATTTTACTGTAGA
TTTCGGACCAAATTTGACCTCCGCCAATTTTGATGGATGCTGGGTACTTC
ACGTGACAGGAATCTTCGAAAGTGGTTGAAATATCGCCAAATTTTTGAAA
GTTTCTCATCCAGATCATTAAAGTATCGCGTCCGAAACTTGATCCAGAGA
AAGAATGACCGGTCGTTTTCACGGTGACTGCAATATTGAATCTGTTGGCA
AATTTGAAAGCACGAACAACATCTCTTGTTGTTTTTGCTTCAACACTGTA
TGATGGGAGATTGGAAGGTTGGTCAGCcagacaaaatctttttgagCATT
CTGGAATCTGCATACATGCACCATTTGCAGATTCACCAAGCACCATTGAA
CTGTTTATATTTTGACATCGTAAAAGTACGGTTGGATTAAATTTATGAAG
ATTTCCATCTAAACAGCTACCAAGACGACGTTGCCAGACATTTTCCGATG
GCCAGCAATATTTGTTTTTTGGTGTGCAGTAACCTTGGATCAATTCCAAC
TGAATCACCAGGACTACTAGTGAAGCAATAATCGAAGAACTTCGAAGATT
CATTGTTAGCACTGACTTCTTAAACTTCAGAATGAAATAACTGACTGGAG
TGTGCTCGTTTTATACCTGCTTAGCGAAGTAATTAGTACTGTTTCGATGC
ACGTAAAAATAGTTGATTTAATTTGTGCCAAAAAGCAATTACCGATATAA
TGATTCAATAATAAAGAGCTTTCTTGATTAAGACAAACCTACGTTTTTGC
AACAAGATTACTTTCGCTTTTTAAACCGTAATTagtgctttttattttta
agctgATAATTTTCTCAAGGAGCTCAAATTTCAATCACAGCGTACTCTTT
GTGTTTCACGCACATGAAACTTGCTttcggtaaattttagtttcgtAACG
TTTTATTCAATGTGGGGTCTAATGATGTTGGATGGTGTCCATATTAACAC
ACCCCTCCCTCATCACGATCACGAAGATTGCCTTTCAATTCATCtttttt
tACCACACACAAAATAGCGCAATATACAGTTGAAtgactctctctctcta
attcagtCTTCGTGGGATCAAAAATTTCCTTTggattagagaaagattcg
aattacagagagtaatttaaaccactttccagctgagggcaccaatattt
catttcgaattacagaaagtgaGTGTACAATTTCTTGAACTCAAGATTTT
GCAATAACAAAAGATCCACAAACCCAGGTTTAACAAATTGAcaatgaaag
ctctttttaaATGTAGATTCTACTTCGCTTAGAGACTCACTGTGTGCCTA
GCTTGTAAATATTTATAATAATAAAACTATTTAGGGAAAGAAACTTTCAC
TTAATTAATGTATATCAATCCTATTAAGAATCAGGTTTGCCAAATATATC
AGCTTGTAGAAAAGTTGATAACAATGAAGTAAAGTACTCTTTAACTTCGA
TCAATAGACCAGCCGAGCCCTGCAGAAGTGAAGCCTGTTACCTCACTTCC
AGAAGAAAGAAGTTGTTATGAACTGTTGCAAAAATATCCGAGCCTTCCAT
CTCAAGAATATAACATCAATTTCAACGGAACCGAAGTTTTTGTTTACTGT
GACATGACGCAAGGTCAAGGTtagcttgtttttttgttaGTTGTGTCATT
TTGCTAAACTCTTCTTTCAAACAAATAATAACTCCAGGTGACAAATCAGT
ATAATAGAGAGGGATAAGTTATGATTCAAAAAACAGTccgacaaatattt
ttcagcataagAGGGATAACTTAAAAGCTTAAGAATTGCGTTTCTTTCAC
AATTTTTTAACCCTATCGTAGGCTTTTAGGGGTGGTTCAGAACTTTAAGG
AGGGGGTTCCTGTACCACGCCTTAACTTCTGATATAGTTggtcttttttg
atgaaatttggtacacaatATGTAATGAACACCTCCCCcaacttgttaat
ttttcgatatttCCCACCCCCCATACCTGATTAGGACCCtttgcttatta
atttttgAaaatattttcagttgtcaaAAGATGAGTCCCATATTTTTCTC
TGAATAAATAGCCAAGTTCTGATTTTTGAAAGGTATTTAGAGATATAATT
TCCAACCCCcgcggtaattaggtccccctgttaattaaaatttgaagatt
tttccaaaCCTCCGTTTATTTCGACCACACCGTTtgttaggcacctgaga
gtaccACGACCTGTTTTGTAAATTATATGTTATATGCATACTATAAGAGT
TTGAAGACCCCGTTTTTACATTGCAGGTTTTTAATAAAAGGATacttctt
tttcagaaaatcctAATCAAACTATTCAGCTTTTATTGACAACATAGTTT
GATTTCAAGTATATTTCTAAATGTTTTAACAGGTGGCTGGACGCAAATCG
CAAACATTCGTCAAATCAATCAACAAAGCTTCTCTTTATCGTCAATCCAA
GTGGACACGCCAGGTGAACTTTCCGATCGCTTACTTTCGGGAGAAAACTA
TGCTCTCTCAGCTCAAGGTCTCCGAGATCTCGTCAACTCAACAGGAGCTA
GACAACTGCGTGTTTATTGCTCCAAACCATCCGTTGGACGAACTTTCCAC
ATCGAATCTCGAGATAATGCAATCGGAGACCAAATCCTTGAATACTTTTC
TGATGTTACGGCAACCGAGCTACCAGATGGTGCCGACTCTTTTGATACCT
TACCTGGTGACACTTCCTACCTAACTTCACATGTTCACGAGTGGCGATTT
CAAAGCGGGAAATGGGGTCATGGCACCATTAAAACTCAGCCCatgaaatt
atacaaaaatctagTGTACATAagtgactctaaaacaccaccCTCTTATG
TTTATAAGGTGGGAATGAATTCAACTCCGAAGTTATATTGTGACGATGAT
GGAACTTTGAATAGCGGAGAATGGAAATACTTCATTCGATGA Coding sequence (CDS) from alignment at sc0000350_pilon:305399..313490+ >XLOC_040691 ID=XLOC_040691|Name=XLOC_040691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2070bp|location=Sequence derived from alignment at sc0000350_pilon:305399..313490+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAATATAACCTTAACACTGCTCTTTGTAATTCTTAGTTTCTCATC
ACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAGCATGTGGATGGCA
AAACATTACCTGAAACTGACCTTCTCCATAACGACACAGAAGTGATAACA
TCCATCAGTCGAATTCAATGTGCCTTGAgatgctCAAGACAAAAAACCAT
CTGTCAAACGGTTCTATATGATGAAGAGAATCGAAAATGTATTTTACAGA
CTGTGAATTCGACACAAAAATCACACGGATACAATACATGGAATACACTC
CAAATACTAAAAGATGTTAAATATAACCTTAACACTGCTCTTTGTAATTC
TTAGTTTCTCATCACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAG
CATGTGGATGGCAAAACATTACCTGAAACTGACCTTCTCCATAACGACAC
AGAAGTGATAACATCCATCAGTCGAATTCAATGTGCCTTGAgatgctCAA
GACAAAAAACCATCTGTCAAACGGTTCTATATGATGAAGAGAATCGAAAA
TGTATTTTACAGACTGTGAATTCGACACAAAAATCACACGGATACAATAC
ATGGAATACACTCCAAATACTAAAAGACCAGCCGAGCCCTGCAGAAGTGA
AGCCTGTTACCTCACTTCCAGAAGAAAGAAGTTGTTATGAACTGTTGCAA
AAATATCCGAGCCTTCCATCTCAAGAATATAACATCAATTTCAACGGAAC
CGAAGTTTTTGTTTACTGTGACATGACGCAAGGTCAAGACCAGCCGAGCC
CTGCAGAAGTGAAGCCTGTTACCTCACTTCCAGAAGAAAGAAGTTGTTAT
GAACTGTTGCAAAAATATCCGAGCCTTCCATCTCAAGAATATAACATCAA
TTTCAACGGAACCGAAGTTTTTGTTTACTGTGACATGACGCAAGGTCAAG
GTGGCTGGACGCAAATCGCAAACATTCGTCAAATCAATCAACAAAGCTTC
TCTTTATCGTCAATCCAAGTGGACACGCCAGGTGAACTTTCCGATCGCTT
ACTTTCGGGAGAAAACTATGCTCTCTCAGCTCAAGGTCTCCGAGATCTCG
TCAACTCAACAGGAGCTAGACAACTGCGTGTTTATTGCTCCAAACCATCC
GTTGGACGAACTTTCCACATCGAATCTCGAGATAATGCAATCGGAGACCA
AATCCTTGAATACTTTTCTGATGTTACGGCAACCGAGCTACCAGATGGTG
CCGACTCTTTTGATACCTTACCTGGTGACACTTCCTACCTAACTTCACAT
GTTCACGAGTGGCGATTTCAAAGCGGGAAATGGGGTCATGGCACCATTAA
AACTCAGCCCatgaaattatacaaaaatctagTGTACATAagtgactcta
aaacaccaccCTCTTATGTTTATAAGGTGGGAATGAATTCAACTCCGAAG
TTATATTGTGACGATGATGGAACTTTGAATAGCGGAGAATGGAAATACTT
CATTCGATGAGTGGCTGGACGCAAATCGCAAACATTCGTCAAATCAATCA
ACAAAGCTTCTCTTTATCGTCAATCCAAGTGGACACGCCAGGTGAACTTT
CCGATCGCTTACTTTCGGGAGAAAACTATGCTCTCTCAGCTCAAGGTCTC
CGAGATCTCGTCAACTCAACAGGAGCTAGACAACTGCGTGTTTATTGCTC
CAAACCATCCGTTGGACGAACTTTCCACATCGAATCTCGAGATAATGCAA
TCGGAGACCAAATCCTTGAATACTTTTCTGATGTTACGGCAACCGAGCTA
CCAGATGGTGCCGACTCTTTTGATACCTTACCTGGTGACACTTCCTACCT
AACTTCACATGTTCACGAGTGGCGATTTCAAAGCGGGAAATGGGGTCATG
GCACCATTAAAACTCAGCCCatgaaattatacaaaaatctagTGTACATA
agtgactctaaaacaccaccCTCTTATGTTTATAAGGTGGGAATGAATTC
AACTCCGAAGTTATATTGTGACGATGATGGAACTTTGAATAGCGGAGAAT
GGAAATACTTCATTCGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:305399..313490 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-1035:7535 |
| Aaloc | 316-474:6610 |
| Aaloc | 1-312:1 |
|
