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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:213332..218766- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040684 ID=XLOC_040684|Name=XLOC_040684|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5435bp|location=Sequence derived from alignment at sc0000350_pilon:213332..218766- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACAAAATGGCTGAATGCTATGTGCGAATGTTGTATACTTTCATTGCA
AAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCTCC
GAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAATG
CAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAAGA
TGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCCTG
ATATAGTTCCTACTGACGAGGATAATTATATCTTGATGGCAAAGCAAGGC
ACTGGCTCTAATGACGAACCTGACAAGGTTTTGAATTTTGAGATGAAATA
TTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGAGA
ATCGCAGCAGCCAAAACAACAAAAAGCAGGACCAAATTTTTCATGAAGGA
CACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTATC
AAACCCTAAAGAACTAATACTCACACACGATAGCTACATTAAGACAGTGA
ACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAATATACATCCATAC
ATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGGCC
TGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGATG
CAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTGAA
AGCGAAAGCAGCGTGAGTAATACGATTTCTTTTATCCTACATTTGAGTTT
AAATCTCAAAAAATTTCTTTCCCTTTCAAAACCCCTTCTCATAGACCCGG
TGTAAATTTTTCAGCAAGTGGGGGGTAATAACAACCGACTAAAACTCGCT
GAGAATTGATATTCCCATGTTTTTCTTGGCTAATTATTTTCAAGTCAGAA
AATTCTGTGGAGATTGAAAACCTACAATATACAAATATAAAATAGTGAGG
ATCTGTTTATTTCATTAGTTTTTAAGCGGGACAACATTTGGGGCGATATT
TTGGGCAATTTTTCATCCTACCGGGTCTGTGAGAAGGTTGGCAAACGATA
TCATACTCCAGGATGCATCGTCTCTTATTTTCCCCCTATTTTCTACTTTC
CTATCTTCTATCCTGATTTTCTGTCGTTCTCAAGTGTTTCTAACTGTTTT
CTAAGTATTTTTCTGAAATCTGCCCGAAAAATTTCCGACACTTAGAGGGA
CTACTTTGAATTCAAAGAGTAAGGGTTTTTAAAGGGTAAATTTGAAGGAA
AGTGAATTGATAATATGCGAGTTGCAAGTTGGTCTTGCAAGTTACTCAAC
TCGCAACTCGCGATTTTATTTTCTTAAAAATGCAACTCGTAAAAAGTAAC
TCGTAAAAAGTAACTCGCAACCCGCATATCTGATATCAACTCGTAACTTG
CAACTCGCTTAATACAAATTCACGAAGGAAATACCTATAACATTACGTTT
TTCAGCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAAAAGATCATA
CACGTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAGCGAACCTCG
TCGGTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATAGAAGCAACC
TTGTTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGCGCTGAGAAG
AAACACATCACAGATGATTATAATTCGTTTGAGAAGAAATCATATGGCAT
GGTCAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCGATAGTGTTA
AAGGGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAAGAGGTAGGA
AATTCCGATTGTACAGCCCCAAGATGTGACCCCTGCCCTAATATGTGAAA
CCTGCCCTAAGATGTGACCCGATTGCCCCAAGATGTGAAACCTGCCCTAA
GATGTGACCCCACTTGCCCCAAGATGTGACCCCACTTGCCCCAAGATGTG
ACCCCAAAAAGCAGCTATAAGATGTGACCCACTCCCAGGTGGGGGGGGGG
TACTAGGGTTGGTGAATGAGGGGTATGTGTGGACGGGACCTCCGAAAATC
GACCCTTAGAGAGACCAAATTTTAGTGAAAAAGTGACCCTTAGAGAGACT
TTTTCGAAAATTGTTCTCTGATTTTCAAAAATTTCCTACCCTCAGTGAGA
CTTTTTTGTAATTTTTTCTCTCAAAATCAAGATTTTTTTCTAAGGTGAAA
AACCCGACCCTTACCGTCCGCACATACCCAGCACCTATTTTTGCCTAAGT
ACCCCCCCCCCGGGGACCCACTTGGCCCAAGATGTGACCCCAGAAAAAAT
CTGGTGGATTTGATGGGTCTGGTGAATCTGCTGATGGACTTGATGGATAT
GATGAATCTGCTGGTGGAGTTGATGGTTTTGGTAAATCTGCTGGTAGAGT
TGATGGTTTTGGTGAATCTGCTGGTAGAGTTGATGGTTTAGGTGAATCTG
ATGGTGGAGTTGATGGTTTTGGGGAATCTTCTGATGGAGTTGATGGTTCT
GGTGAATATGCTTGTGGATTTGATGGTTCTGGTGAATGTGCTTGTGGATT
TGATGGTTCTGGTTAATCAGCTGGTGGATTTGATGGTTCTGGTGAATATG
CTGCTGGAGTTGATGGTTCTGGGGAATCTGCTGGTGGAGTTGATGGTTTT
GGTGAATGTGCTGGTGGAGTTGATGGTTTTGGTGAATCTGCTGGTGGAGT
TGATGGTTTTGGGGAATCTTCTGATGGAGTTGATGGTTCTGGTGAATATG
CTGCCGGAGTTGATGGTTTGGTGAAATGTGATGGTGGGATTTGATGGTTT
TGGTGAATCTGCTGCTGGAGTTGATGGTTCTGGGGAATCTGCTGGTGGAG
TTGATGGTTTTGGTGAATCTGCTGGTGGAGTTGATGGTTTTGGGGAATCT
TCTGATGGAGTTGATGGTTCTGGTGAATATGCTGCCGGAGTTGATGGTTC
TGGTGAATGTGCTTGTGGATTTGATGGTTCTGGTTAATCAGCTGGTGGAT
TTGATGGTTCTGGTGAATATGCTGCTGGAGTTGATGGTTCTGGGGAATCT
GCTGGTGAAGTTGATGGTTTTGGTGAATGTGCTGGTGGATTTGATGGTTC
TGGTGAATATGCTGCTGGAGTTGATGTTTCTGGTGAACTTGCTGGTGGAG
TTGATGGTTCTGGTGAATATGCTACCGGAGTTGTTGGCTTTAGTGAATCT
GCTGGTGGATTTGATGGTTTTGGTGAACTTGCTGGTGGAGTTGATGGTTC
TAGTGATTCTGCTAGTGAAGGTGATGGTTCAGATAAATATGCTGGTGGAT
TTGATGGTTCTGGTGATTCTGCTAGTGAAGGTGATGGTTCTGGTGAATCA
GTATGAGTTGATGGTTCTGGTGAATCTGCGGATGGGTTTTTTTGATGGTT
TTTTGACATGAATGATCGAATTAGAGAAAATTTATCATTTTTACAGATAT
TTTAACTCGAAATTATGTACACAAGTATTCTACTTTCCAGGAAAAATTTT
GGGGGCCATTCATAACATAGTGAGAAAAATAGTGTAGTAGTTTGTCCATA
AGTAAATTTTCACATTTCCTTTCATATATTTCTCTGAAAATTCTTTGCAT
CTTTGAATTCAAAATTTGTCATTGTTAACCTATAAAAGCTTCGAAAATTT
CTGACAGCCCACAGAAAATCGAATTAGGAAGAGAAGATTGCTGAAAAGAC
AAAAAAATTGTTAGAATTATAAAAAGTTTCGAATAACAGAGGTTTGAATT
ATAGAAATTTCACCAGCCGATTTACCAGAACTTTCAAATCCACCAGCAGA
ATTACCAGAACCATCAAATCACTCAGCAGATTCACCAGAACCATCAACTC
CATCAGCAGATTCCCCAAAACCATCAACTACACAAGCAAGTTCACCAGAA
CCATCAAACCCACCAACAGATTCACCTAAACCATCAAATCCACCAGTATA
TTCACCAGAACCATCAACTCCACCAGTACATTTACCAAAACCTATAATTT
CCCAGTGATTTTTTTTGGGGTCACATGTTGGGGCGAGTGGGTCACATCTT
AGGGCAGCCTTTCGGCTCAGATCTTGGGGCTGTACACCGATTTTCCAGGG
CAGGGCATCGAAAACATATAATGTGTGTTTGCTTAGGTTTCACTCTTCCG
CCTACAATCATGGACCCTTTTGGCCATGTGATCAAAATAAAGAGCTCAAA
TGTAATCACACGTATACAATCACGGACGAAAGGTTGTAGACTCAAAAAAA
GCATGAAAAATTTGGAAATAAGCTCTTTGCCTCTAAAAACCCATTTTTAA
CAGAGCCAATGTTGTTTTTATTGGATTTGAAGAGTTTGAGTGACAAGTCC
AGAAGCCAAATACACTCGACATTTTGAAGGAATTTTTTTCAAAGTTTTCA
GACCTTTTTTTCTGAGATTGAAGGTTGAATGAGTTTTGCTCTTCAACTTT
TTCGAGAAAACATCTAATAAGACCATATTTGAGATGGCTTAATCAATTAT
AAACAGCTTTTCAGAGATGATCTCTGGTGCGCCCACCACCTGTGTGGCTG
AAGTTTACCCATTTTCAGTCATTGAAGTCTTTGAATCCCAAAATCACGAA
GATTAAAGCCATATGGAATGCTAGCGAGTCTGTGTAGGTGTCTTCTGCCA
AATAATCACTTGTGGTACATTTGGGGGAATTTCCCAAGTGTCAAGGAGGC
TTTTCTCGGCACTATTTAGGAGTTTTTGAAAATTCTACAGACCTTCTGTC
CATGATTGTAAGCGGAAGAGTTAAACCTAAGCAATATAGGCTCTACGTAT
TCAAGTACTCATGACTTAGCCAAAAAGGTCGAGCACTTTAATGACACTTG
CTATTTAAGGGAAGAAACTTTGGCGGGAATTTAATTTGACGGATGGCGGT
TTTTTAAATCTAAAATCAGGGTGAAAACATTGATATCGGGGGTAAATTGT
GAACAATAAAAGGACATAAAAAGAAAAAAATTAAATTTGGCGGAAATTTA
ATTTAGCAGATTGCCGAAAAAATTTAATATGGCGGGAACTTAATTTGGCG
GATTTCAGACAAACTCACCAAATCCGCCAAATTTTCTTCCCGCCAAAATT
TTTTCCCTTAAGGTATGAGGTTCTCAACCATGTTAGCGATTAATCTCATT
TGCGCTATTCCATATTCAACTAAAAGAGTGTTTTATTTTTCAGGAGAAGA
AGTGGATATTATCGGTGAAATTTCATTTACACGTCGAACATTTTCTCATT
GAGCTCAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTGAGTATTC
TTCAAATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAAGAACCTG
TAACAGACTTTATACCGTCTGAAAGAAGACACTAA Coding sequence (CDS) from alignment at sc0000350_pilon:213332..218766- >XLOC_040684 ID=XLOC_040684|Name=XLOC_040684|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000350_pilon:213332..218766- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACAAAATGGCTGAATGCTATGTGCGAATGTTGTATACTTTCATTGCA
AAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCTCC
GAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAATG
CAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAAGA
TGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCCTG
ATATAGTTCCTACTGACGAGGATAATTATATCTTGATGGCAAAGCAAGGC
ACTGGCTCTAATGACGAACCTGACAAGGTTTTGAATTTTGAGATGAAATA
TTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGAGA
ATCGCAGCAGCCAAAACAACAAAAAGCAGGACCAAATTTTTCATGAAGGA
CACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTATC
AAACCCTAAAGAACTAATACTCACACACGATAGCTACATTAAGACAGTGA
ACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAATATACATCCATAC
ATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGGCC
TGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGATG
CAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTGAA
AGCGAAAGCAGCAAAACAAAATGGCTGAATGCTATGTGCGAATGTTGTAT
ACTTTCATTGCAAAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGT
TGAAGATTCTCCGAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAA
AACTATTCAATGCAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAA
AGAAATTCAAGATGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACA
ACAGTAACCCTGATATAGTTCCTACTGACGAGGATAATTATATCTTGATG
GCAAAGCAAGGCACTGGCTCTAATGACGAACCTGACAAGGTTTTGAATTT
TGAGATGAAATATTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGAT
CTGGGATGGAGAATCGCAGCAGCCAAAACAACAAAAAGCAGGACCAAATT
TTTCATGAAGGACACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCA
AATTACTCTATCAAACCCTAAAGAACTAATACTCACACACGATAGCTACA
TTAAGACAGTGAACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAAT
ATACATCCATACATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGC
CTTTTGGGGGCCTGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCA
GCCGTAAGGATGCAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTT
TTGTTGCGTGAAAGCGAAAGCAGCCCTGGTGACCTTACCCTTTCCATGAG
ACGAGGAGAAAAGATCATACACGTCTGGATTGGAAAATCAGAAGAACAAT
TTATTTACAGCGAACCTCGTCGGTTTGAATCGATTGAAGAAATCATCGAG
GTTTATCATAGAAGCAACCTTGTTTCAAAAAGAGGCCAAACTATTCGACT
TTGGCGAAGCGCTGAGAAGAAACACATCACAGATGATTATAATTCGTTTG
AGAAGAAATCATATGGCATGGTCAAGATGTCACAAGAAGCCTGCGAAGAT
AAATTGATCGATAGTGTTAAAGGGGCTTTCTTGGTCCGCAAAATAGACAA
GGAATTTGAAGAGCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAAA
AGATCATACACGTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAGC
GAACCTCGTCGGTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATAG
AAGCAACCTTGTTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGCG
CTGAGAAGAAACACATCACAGATGATTATAATTCGTTTGAGAAGAAATCA
TATGGCATGGTCAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCGA
TAGTGTTAAAGGGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAAG
AGAAGAAGTGGATATTATCGGTGAAATTTCATTTACACGTCGAACATTTT
CTCATTGAGCTCAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTGA
GTATTCTTCAAATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAAG
AACCTGTAACAGACTTTATACCGTCTGAAAGAAGACACTAAAAGAAGTGG
ATATTATCGGTGAAATTTCATTTACACGTCGAACATTTTCTCATTGAGCT
CAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTGAGTATTCTTCAA
ATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAAGAACCTGTAACA
GACTTTATACCGTCTGAAAGAAGACACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:213332..218766 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1102-1290:190 |
| Aaloc | 763-1101:3931 |
| Aaloc | 1-762:5436 |
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