|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:284021..287190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040679 ID=XLOC_040679|Name=XLOC_040679|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3170bp|location=Sequence derived from alignment at sc0000350_pilon:284021..287190- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTTGGAATTGGGCTGTCAGATCTAGAAGAATTTACACTAGAAAT
TTCTGTAAATTCGGCCGCCATATTTGTTTTTGAAAATTATCCGCCAACAA
TATTACGGCTGCCGACTTTTATAAACATTCGAAGGATTCGTATCAAAATG
GCGGCCAGTTTCGTGATCACATTTGCAATTTTTATTGCAATAGCTTCCAA
AATCTTCTTAGAATTCAGTCAAACTATATCAAGACCTTACATGGATGAAA
TTTTTCACATACCGCAAGCTCAAAATTATTGTCATGGAAATTATTTTTAT
TGGGACAACAAAATAACAACACTTCCAGGGCTGTATATATTCAGTCAAAT
TTATTTGAAAGTTTTTGCAACTCTTCAAGGATTACAAATCAAAGATTTAT
GCGATGTGAAAGATCTGAGACTGACAAATGTCATATTTATTGCTTTGACA
TTTGTCTATTTGTATCAAACTTTCAGAACATATAACCATGGAAAGAGATT
TCAGGTAATATTTTTAAATATATACCGTGGTGAAAAAGGGTAACTTGCAT
CAGTGGAGGCTAACATGCATAGCCCTCAAATGAAAGGCCTGGCTGGTCAT
TAAAATACGAAAATAAATCGAAACAAAAATGGTAGAGTAGAGCTGCGAGC
GGAGCTGCGTATGTGTATTTTAATGACCAGCCAGGTCATTCATTTGAGGG
CTATGCATGTTAGCCTCCACTGATGCAAGTTACCCTTTCTCACGGTATAT
TTTTTAATTTTGTTGTACTCAACTTTTCATCATTTTGTTTTACACTGTAC
TTCTTCGTAGTCTTTTTGTGTCCTTTTACCCTTCCCTGGTGAAAGTTAAG
GCAAGGCACAAAGAATATTTATCCAAGGCAAGGAAATCCAAAATGATTTG
ATAGGATCTGGTAAATTTTGAAGTTGCAAGAAATTAGTTACTAACTTATT
TAGCCTTTTAGGTTTTCTACATTTTGGATCAATTTCTGTAATTAATGCGG
CTATGATTCGATGTTTTAGGAACCTAAATTGATTGAGAGTTCCTTATTGC
TTGAATAGCGTATATCTTCTTTATCACTAAAATTTAACTCTAAAATACCC
TAGAAATATTCCCTACTTATATACTACTTCAAAAACTGCTGATATAATGA
AAATCCTAAACAAAGCAAAATAAAAGACCTATTGTTCAAATATAATGAAG
ATTTAGTACGTGTTCTACGTCACGTTCAAGTCCGATGAGTTAGCGCTTTT
AAACTTGCCAAACTCGTTTATGTACAATGAGAATTGCTGAGTTCAGTTTA
TGTAATGTACAAACGTGCTCAGTTTACGTCATAAACAACGTATCGAGAAA
TTTCGAAATGTTTCTTCGTTTCTTCTCTTTTCGAGAATGTTCTTTAAATG
TTCAAATCGCGTTCGCGACAATTTCTATCAGACATTATTAGAATATCTTA
GGGCTTCAGAGATCTATTTTAGGGCTTGTGAAAAAGTCGCGAAAGAAAGA
AGGAAAAAGGGTCGATAGTATTGTGAAAGATAAATTGAAAAGATTGCGAA
AGAAAGAGCTGAAAAGATCGCAAAAGGCTAGAAAATATCGCCAAAAAAAG
AATTGAAAAGATCCCGAAAGAAAAAGTAGTCGAAATAATTTTGGAGGGAA
ATGCTGAAGAAATTTCGAACGAAAGAGTCGAAAAGATCTCGAACGAAAGA
GTCGAAAAGTTCTCGAACGAAAGAGTCGAAAAGATCTCGAACGAAAAAGT
CGAAAAGATCCCGAACGAATGAGTCGAAAAGATCTCGAGCGAAAGAGTCA
AAAAGATCTCGAACGAAAGACTCGAAAAGATCTCGAACGAAAGACTCGAA
AAGGTCTCTAACGAAAGAGTTAAAAAGATCGCAATAAAGAATAAGGGAAA
AGGAAGAGTAGAAAAAATGAAAAAGAAAGCAGCTGAAAAGAAAAACAGAT
AAGACCGCGATAGAGAGAGTTGAAATCCTCGTAAAAGAAAGAATCGAAAA
TATTTCGCCAGAAACCTTAACCATGTTTGACATATGGTATAATTTTTAAG
CGGATTTACGGTAATTTTAGAAGAACCGAATCCCGTTTAGATCCTGATAA
AGTACACCCCTATCGAACACTCCATAATTTTCCAATGATTCGTTTTTCAG
GACTCGATGAAAGTTGCTTGTGCCGCTTTGGTGGTGGTTCACTTCCCGCT
TCTGTATTTCTTCACCTTTCTCTATTACACTGATGTCGGCTCCACCTTGT
TTGTACTCATGGCGTATTATTGGAGCATGAAGAACCGCCACTGGTTATCC
GCCTCTTTTGGCGTCATCGCAATCTTCTTTCGCCAAACGAATATCGTATG
GGTTGGATTCTGTTGTATTTGTGCACTCCTAAACCATTTAAGACGAAATG
GAAAGTTGGGCAAAGACGACTCTCTGGTCCGTCAAATATTCGATGCCGTT
TTAGGATGTTTATCAATGCTTTTATCTTCGATTTGGATTGCAGTTCCGTA
TGTTTTTGTGCTGGTTGGTTTTGTAGGATTTGTTATCAAAAACGACGGAA
TCGTGGTCGGCGATCGTACGTCGCATGAAGCTTGCCTCAATTTTCCACAA
ATTTTATATTTTTCTGTTTTCACCATATGTTTTTCATCATTCGTTGCATT
GAGATATTTGAATATCCTTAAAACCTTGAAAATGGTTTGGAACTTCATTA
CATCACCTATAAACTTGTTATGCTTAATCGTTCTCAGTGCTGGTATGTTT
TATGCCGTTCACCATTATACTTATCAGCATTTATACCTGATCTCCGATAA
CCGTCACTTTACTTTCTACATTTGGAAGAAAATATTCGGATATCACCACG
ATGTCAAGTATTACCTAATTCCTATTTACGCAGTATCCACCTTGGTCATG
ATCAACGAGCTTTCCTACAGGCGATCAAGCCTCTGGATCCTTGTCTTCTT
CGCATGCACAGCTATTGTCTTAGTTCCACAGAAGTTATTAGAGTTCCGTT
ATTTTATCATCCCATATTTGATTTTCCGCTTAAATTTGCGACCATCGACC
TGGTTAGAATTGTTGGTAGAAGGGTTGGTTTATGGTGTAGTGAACTATTT
GACGATGAACATCTTCTTGACTCGGACACACACTCAAGATGGACATACTG
GACAAAGAATCATGTGGTAA Coding sequence (CDS) from alignment at sc0000350_pilon:284021..287190- >XLOC_040679 ID=XLOC_040679|Name=XLOC_040679|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3048bp|location=Sequence derived from alignment at sc0000350_pilon:284021..287190- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTTGGAATTGGGCTGTCAGATCTAGAAGAATTTACACTAGAAAT
TTCTGTAAATTCGGCCGCCATATTTGTTTTTGAAAATTATCCGCCAACAA
TATTACGGCTGCCGACTTTTATAAACATTCGAAGGATTCGTATCAAAATG
GCGGCCAGTTTCGTGATCACATTTGCAATTTTTATTGCAATAGCTTCCAA
AATCTTCTTAGAATTCAGTCAAACTATATCAAGACCTTACATGGATGAAA
TTTTTCACATACCGCAAGCTCAAAATTATTGTCATGGAAATTATTTTTAT
TGGGACAACAAAATAACAACACTTCCAGGGCTGTATATATTCAGTCAAAT
TTATTTGAAAGTTTTTGCAACTCTTCAAGGATTACAAATCAAAGATTTAT
GCGATGTGAAAGATCTGAGACTGACAAATGTCATATTTATTGCTTTGACA
TTTGTCTATTTGTATCAAACTTTCAGAACATATAACCATGGAAAGAGATT
TCAGATGACACTTGGAATTGGGCTGTCAGATCTAGAAGAATTTACACTAG
AAATTTCTGTAAATTCGGCCGCCATATTTGTTTTTGAAAATTATCCGCCA
ACAATATTACGGCTGCCGACTTTTATAAACATTCGAAGGATTCGTATCAA
AATGGCGGCCAGTTTCGTGATCACATTTGCAATTTTTATTGCAATAGCTT
CCAAAATCTTCTTAGAATTCAGTCAAACTATATCAAGACCTTACATGGAT
GAAATTTTTCACATACCGCAAGCTCAAAATTATTGTCATGGAAATTATTT
TTATTGGGACAACAAAATAACAACACTTCCAGGGCTGTATATATTCAGTC
AAATTTATTTGAAAGTTTTTGCAACTCTTCAAGGATTACAAATCAAAGAT
TTATGCGATGTGAAAGATCTGAGACTGACAAATGTCATATTTATTGCTTT
GACATTTGTCTATTTGTATCAAACTTTCAGAACATATAACCATGGAAAGA
GATTTCAGGACTCGATGAAAGTTGCTTGTGCCGCTTTGGTGGTGGTTCAC
TTCCCGCTTCTGTATTTCTTCACCTTTCTCTATTACACTGATGTCGGCTC
CACCTTGTTTGTACTCATGGCGTATTATTGGAGCATGAAGAACCGCCACT
GGTTATCCGCCTCTTTTGGCGTCATCGCAATCTTCTTTCGCCAAACGAAT
ATCGTATGGGTTGGATTCTGTTGTATTTGTGCACTCCTAAACCATTTAAG
ACGAAATGGAAAGTTGGGCAAAGACGACTCTCTGGTCCGTCAAATATTCG
ATGCCGTTTTAGGATGTTTATCAATGCTTTTATCTTCGATTTGGATTGCA
GTTCCGTATGTTTTTGTGCTGGTTGGTTTTGTAGGATTTGTTATCAAAAA
CGACGGAATCGTGGTCGGCGATCGTACGTCGCATGAAGCTTGCCTCAATT
TTCCACAAATTTTATATTTTTCTGTTTTCACCATATGTTTTTCATCATTC
GTTGCATTGAGATATTTGAATATCCTTAAAACCTTGAAAATGGTTTGGAA
CTTCATTACATCACCTATAAACTTGTTATGCTTAATCGTTCTCAGTGCTG
GTATGTTTTATGCCGTTCACCATTATACTTATCAGCATTTATACCTGATC
TCCGATAACCGTCACTTTACTTTCTACATTTGGAAGAAAATATTCGGATA
TCACCACGATGTCAAGTATTACCTAATTCCTATTTACGCAGTATCCACCT
TGGTCATGATCAACGAGCTTTCCTACAGGCGATCAAGCCTCTGGATCCTT
GTCTTCTTCGCATGCACAGCTATTGTCTTAGTTCCACAGAAGTTATTAGA
GTTCCGTTATTTTATCATCCCATATTTGATTTTCCGCTTAAATTTGCGAC
CATCGACCTGGTTAGAATTGTTGGTAGAAGGGTTGGTTTATGGTGTAGTG
AACTATTTGACGATGAACATCTTCTTGACTCGGACACACACTCAAGATGG
ACATACTGGACAAAGAATCATGTGGTAAGACTCGATGAAAGTTGCTTGTG
CCGCTTTGGTGGTGGTTCACTTCCCGCTTCTGTATTTCTTCACCTTTCTC
TATTACACTGATGTCGGCTCCACCTTGTTTGTACTCATGGCGTATTATTG
GAGCATGAAGAACCGCCACTGGTTATCCGCCTCTTTTGGCGTCATCGCAA
TCTTCTTTCGCCAAACGAATATCGTATGGGTTGGATTCTGTTGTATTTGT
GCACTCCTAAACCATTTAAGACGAAATGGAAAGTTGGGCAAAGACGACTC
TCTGGTCCGTCAAATATTCGATGCCGTTTTAGGATGTTTATCAATGCTTT
TATCTTCGATTTGGATTGCAGTTCCGTATGTTTTTGTGCTGGTTGGTTTT
GTAGGATTTGTTATCAAAAACGACGGAATCGTGGTCGGCGATCGTACGTC
GCATGAAGCTTGCCTCAATTTTCCACAAATTTTATATTTTTCTGTTTTCA
CCATATGTTTTTCATCATTCGTTGCATTGAGATATTTGAATATCCTTAAA
ACCTTGAAAATGGTTTGGAACTTCATTACATCACCTATAAACTTGTTATG
CTTAATCGTTCTCAGTGCTGGTATGTTTTATGCCGTTCACCATTATACTT
ATCAGCATTTATACCTGATCTCCGATAACCGTCACTTTACTTTCTACATT
TGGAAGAAAATATTCGGATATCACCACGATGTCAAGTATTACCTAATTCC
TATTTACGCAGTATCCACCTTGGTCATGATCAACGAGCTTTCCTACAGGC
GATCAAGCCTCTGGATCCTTGTCTTCTTCGCATGCACAGCTATTGTCTTA
GTTCCACAGAAGTTATTAGAGTTCCGTTATTTTATCATCCCATATTTGAT
TTTCCGCTTAAATTTGCGACCATCGACCTGGTTAGAATTGTTGGTAGAAG
GGTTGGTTTATGGTGTAGTGAACTATTTGACGATGAACATCTTCTTGACT
CGGACACACACTCAAGATGGACATACTGGACAAAGAATCATGTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:284021..287190 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-1524:1021 |
| Aaloc | 1-504:3171 |
|
