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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000350_pilon:314581..318877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040677 ID=XLOC_040677|Name=XLOC_040677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4297bp|location=Sequence derived from alignment at sc0000350_pilon:314581..318877- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCCAATAAATTTGAAGCGTGAGTAATTGATTCTTTTGAAGAATC
CAGTCATTATATATTACATAATTAGAAAAACCGTATGATTTCTGACGATT
GACTATTTTCGAATTCAAGAAAATTTGAATTTATGAAGGATTTTTTTTAA
CAGTAAAATAGGAATCCAGAATATTTTGAGATTAATTTGATTGGCTTCTT
TTTTCTTTCATTGATAACAAAATGTGTAATTCATTTCTGATTTTTTTTAC
CAGACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAG
GGGAAGAAAATGGGGAGGTATGTTTGTTAAAAAAAATTAAAGTATGACAA
TCGCTGGTTTAGAAACTTGCATTCAGAATCCTGGGGGGTTTTAATGATAA
GCAGGGGTGTGTACGCGGAGGAAAAAATAGAAAATGGAAGGGTCATTAAA
AAAGTTTTTTCTTTCCCGTGTGCAAGAATTTCTTTGGAATTTATACTTTT
ATATTTTTTTAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGACCACAA
TAAAGTGAGTACATGGCTTTATGCGGTTCATTTGGTTGATATTCACTAAA
AAAAAGAATGAAAAATAATCTATTTTTCTTCCTGGAAACTATATAATCCT
GTATGGAGTCTTGCATAGACTCTCATAGGAGTAAAATACACCGATTTTAA
GGCCACCCTATAAATAAAAGTATCTATTAAAGCCAAACAACAAAGTTTTT
GGAATTGGTAGTTGGCAATGTGTAAAAAAGAAATTAGATACTTGATATTC
ATTACTCCTCACATTGCTCTAACTCTCTCTTTCTTTTAGTTCGTTTTCCC
AGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATT
GTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACTTACTCAACAG
AAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTAAGCTT
AAAATAATTCTTTAAACATAAAGACATGGACTTGCTGCCTATTAAGCAAT
ATTTCCAGTGTTGTATACCTTTTTGCTTTAGGGGAAAAATAGCCAGGATT
TGTCTTTATTGTTAAAATTTTGCCAAAAATTGTGTCACCAACTTGCTCAA
GTTAAAAATAACTCGTGGGCTTTCAGTTAGGGAAAATCCAAGGTTCCCTA
AAAATAGTCAATCAATTTAGTCATTTCAAGTTAAAAGGTATCTAATTGCG
GTTAAAGTGCAATAAGACACCAGAAAATCATGAGGCATGGTTGATGACAA
AGCCATGCAGAAGACCTGGAAGTAGTCCATTGTATGCTAAGTTTTTATTT
TCTAGGTGGAACAATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGA
GAATTGACAGGACACAGTGATATTCATTTATTTAAACATGGCATAAGACC
AATGTGGGAGGTATGTATATAGGCAATGAACCATCCCATCGAGTAGTCTA
GCATACTAGACGTCTAATAATTCAGACTCAACGCAAAAAAAAAATAAAAA
TTATAACGAACAAGTTTTAGTATTTCATCCTGTTACGGTTTTTGTATTAT
TACATTACACCAATATAACGGTATTACACAGATTAAAGACGGCTCCATGT
TTCTAGGGAGTATTAGACCTTTCGAATCTCAATCGTTTTTACCCTGTACA
CATTTTGGGAGCGATTTATTTTGTTCGGAAAATATAAAGTAACATGTATT
TCTAAATGAGTATATTCTTTATAATAATAGGACAAAGCAAACAAGAACGG
TGGCAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGG
AAAATCTTGTGAGTCACCTGTTTCTTTTTCATTTTTATAAACATAACTAA
TAAGTAAATCTAGACTCAAAATCAACTAACTAAACAATGGTCCTAGGCAG
AACATTGCTGAGCGGGTAGACATTTGCTTATGAAAATAGATATTTATTTT
AGAATTTTATCCCTTATTATATCGATCTCGTAAAGGATCTGAAGTAATAT
TATCACTTATTCTCTTATTTTTTCAACGATTGTCATTGTTTAAAACCATT
TATAATTTTCTTCCTATAGATATTAGCGATGTTGGGCGAACAATTTATGG
TTGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCTACCAGGTTGAC
GAATAATTCCTTTACTCTGAAAATTTAATTAAGTTACCATAACTCGATCA
CGCACTTGAGTGATGCAATGGGCTTAAAACGCCATGTTAATATTAAGACC
GATAAATTGTTGGAGTTTTAGAGGTTCGAGTCTTGGAGATTTTGTTGTAT
TAAAATCTTGTATTTTACTATACTCCTCATTTTACCTCGAACTTTACTTT
CACCTGAAATAATATCTCAAAAGATTTGCAAATAATACAAAAATAATGCA
TATTTTCATAACAATCTTTGATGCAAAGTAATAATATCTCAATAAATTTG
CAAATAATACAAAAATAATGTCATGAACGATTTATTCGATATGGAATCGT
AATGCAAGTGATCAAGCCACTACTACTAGAATAAGGTATCATGCTTCATT
CTTAAACTTTTTTGATTATATTCCACTCCTAAATATCTTTTTAACGAGCA
CAAAACTGTCATCCAATTCGCTATCAAAAGTCATAACTTTTTTATCTCTG
CTTCAAATTATTTTGAGACAGACTTAAGGATCTCTAAAGTAAGTAAGTCT
GCGACCGCAGATACCAAATGACCGAAGTGTCCTCTTTCGATAGCTATCTA
CCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGATTTCTCCATTAC
TCTTGATCCTTCTCTTAATTGCTGAGCATCAAGCAGAGAGGTATCAATAC
CATTTTGAGAATCTTTGGTATGAGCTGGCTGGGGGTTGAACCCACAACCT
TACGAATCGTAGCCAGATGCTTTACCACTGCACCACGGTTCGCTAACTCT
ATAAGCTTTGCATCGCTTCTCAACAATTTGTTCCTTTCCATTTACAGGGA
TACATTACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGAGTACA
AAGCCCACATGGCTAGCTTGACGTAAGCATTTTCTTTAATTTGTTCCTCG
CGTACTTCACTTCCGTACATTTTAAACACCCTTGTTATCTGTTTACAGGG
TGGACATCAGAAATATGCTAAGCCAATTAAGCAATTAGTATCATACTTCT
GTATAGCATCAATTCTCCCGAATATCTCTTTGTTATTTGTGATATGTGCC
AAATCTTCACCGTAGAATGGTTATTTACTAACAAACTCCACTGGTGATTG
TCTTTAGACACGCTCGTGATTCAGTCTCTAAAATAACCTATTCATCAATA
ATCTCCTAAAATAGAATTTACATCCTTCTGATTTCTGGCAACTGAAAAAG
TCCTTTGGCAAATTGAGTTAGAAAAAGGTTGCCACCATGGATATTTTTAA
TGCCCGTACTACTGTACTCTATCGATAACTCCATTAAAAAAAATCACTGC
AGTGTCACTTGTTTTTCAAATTTACTGTATATGCACATGACTGTATGTTT
TCACAATACGTTCATGCATGTGGATTGGAGGATGAATTCTCCATGGGTTC
CAAAAAAAGACATAAAAATTGCCATTGTCCATTGGGGGTAAATCTGCGAT
ATCCAGGGGTAAATTTTGGCAATTGAAAAAGTCCTTTGGCAAATTGAGTT
AGAAAAGTTTTTTTATGAGATTCCCAAAAGATCAAACTTAAAAAGTTTCT
TAGGATTTTATTTCTAACCGAGTTGTTTTTCCCCAATTTACAGATAACTG
AAAAAATCACATTTAAATTTACTTTTTTATCGATATTTTTACAGAATTTA
GGATTTAAAGAGTTAAAGTCAATTCCAAAAAAAATCCCAAGACATTTTTT
TAGTTCAATCTATTGGGAACATAGTATCGAAATTATTTTTTCAAAATTCA
AAAGCTATGGGTGACTTTAACTTCTTTGAAGTAGGTAAGGTTAAAATTCT
TAAGATTTTAATTATATCCTGCCCAGTTTTTTAAATTCAGCTGAAACTTT
TACCATTAGAAAGAGAATATTAATGGCTTTCAGAAAATATATACTTTTGA
TATATAAAGATTTGTTGTTCTAAAGATATGATCAATTAAAGAGAATGTGT
CAAGAAAGGTGAACACATACCTTAACAATCACGAGATATCTTTCTTTCTT
TCAGGGACCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGA Coding sequence (CDS) from alignment at sc0000350_pilon:314581..318877- >XLOC_040677 ID=XLOC_040677|Name=XLOC_040677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000350_pilon:314581..318877- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCCAATAAATTTGAAGCATGGCATCCAATAAATTTGAAGCACTG
GCACGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGA
AAATGGGGAGACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAATCT
GATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGCTCAAA
AGAAGACCACAATAAAATCGGGTCAGATGATTCTGGCTCAAAAGAAGACC
ACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCAC
AAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCAA
ACAACAACTTACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGTG
CTTTCTCTTCCTTCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAG
CACAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGG
CAAACAACAACTTACTCAACAGAAATATGAAGACAGCATCAAGCTGATCG
GTGCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTCGTTCATGGTC
CGACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTTAAACATGG
CATAAGACCAATGTGGGAGGTGGAACAATTTTGGGCATATTACTCGTTCA
TGGTCCGACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTTAAA
CATGGCATAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGTGGCAA
GTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGAAAATC
TTGACAAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGAAAAAA
GGACTTGCTTCTAGATGTTGGGAAAATCTTATATTAGCGATGTTGGGCGA
ACAATTTATGGTTGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCT
ACCAGGTTGACGAATAATTCCTTTACTCTGAAAATTTAAATATTAGCGAT
GTTGGGCGAACAATTTATGGTTGGTCCAGAAGTTTGTGGAGCTGTTGTAT
CTTTACGCTACCAGGTTGACGAATAATTCCTTTACTCTGAAAATTTAAGT
GATCAAGCCACTACTACTAGAATAAGGTGATCAAGCCACTACTACTAGAA
TAAGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATACCATCATG
GAGTACAAAGCCCACATGGCTAGCTTGACGGATACATTACGGAGAGTATT
GAACCTTCCTCAAAATACCATCATGGAGTACAAAGCCCACATGGCTAGCT
TGACGGACCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGAGGA
CCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350_pilon | genome | sc0000350_pilon:314581..318877 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 679-720:43 |
| Aaloc | 604-675:1250 |
| Aaloc | 577-600:1739 |
| Aaloc | 466-573:2179 |
| Aaloc | 388-465:2518 |
| Aaloc | 283-387:2943 |
| Aaloc | 130-282:3459 |
| Aaloc | 88-129:3786 |
| Aaloc | 25-87:4044 |
| Aaloc | 1-21:4298 |
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