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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:612754..615456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040661 ID=XLOC_040661|Name=XLOC_040661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2703bp|location=Sequence derived from alignment at sc0000216_pilon:612754..615456+ (Clytia hemisphaerica_ch_hm2_pilon)
ACATGGCGCTGCGAGCATGTGATTGTtgctgaaaagaagaaaattatagt
tttacaaaaatttttggtgTTCTTCAATGAAATGGCTGAAGAAGGAGGAG
CAGGAAGTGGAACTAATAAAGGTGGTTTCAAACCTCCTACACTTGACTTT
TCTGTGGATAGACATTATGCTTTCAAAATCTGGAAAGAAAAATGGGATGA
CTACTTGCTTTTGACTGATGGAGCTCAAAAACCAGCAGAATATAGAGCTG
CCATGATTAGATACTGTTTTTCTTCTGAGACAAGAAACATTTATGATTCA
TTAAATTTATCGGAGGCTGAGAAGAGAAATCCTGAGACAATAATCGACAA
ACTTGAGCAATTTGCTAAGGGAGTCATCAACGAAACATTAGAACGACATA
AATTCTTTGCCAGAAAACAGGAATCTGGTGAAAGTTTTGATGACTTTGTG
ACAGAATTGAaacttttgagcaaaaattgtaACTTTTGTGATACCCCACA
ATGCTACCCAAGTTTACTTCGAGATCGAATCATCAGTGGAATTTCAAGTG
ATGTTGTACGTGAGAAACTGTTGGCTGAACGAGATTTGACGTTGGCGAAG
ACACTCGAAATTTGTAAATCTGCAGAAACAGCATCCACTGGGATGTCAAC
CCTTCGAACCTCAAATACACAAGAACCTTCAGGAACTGCAGTAGACAGGG
TAGGAACTCAACATACtgatttttataacaacaataACAAGAGAAGTAAC
AATCAACAAACACGTCAATTTGGAGATGGTAAGAATCGAGTTAATTGTAA
ATTTTGTTCACGAAACCATGAATTTGGTAGGAAAAATTGCCCAGCCTGGG
GTAAAGAATGCAGAGACTGTGGGAAAGCAAACCATTTTTCGAATAGCAAA
GTTTGTCAGGGAAAACAGGCTGGGGGAGTACACCAACAAGAGAACAATGA
ACCTTTAGATCTTTTCTATCTGGGGGGTATTTCAGCGGGTAGTGTCGAGG
GGGTGGACGAGGTTGAATCTGAAAGTATCCAAACATCAGTACAATTTATG
CAAAATTGTTGGGAGACTGTTGTTCGTACCAAAGTAGGACAAGTACCTTT
TAAGATTGATACTGGAGCAGAAGTGACTGTAGTTGGTGAGAGACATTTGA
GTCCATTAGGAATAAACAAAGCTGCAATGAGATCAACAAATCGAAAACTT
GTTGGTCCAGATGGAAAACCCTTGAACTGTATAGGGTTCGTAGCAATCAA
AGTGTCATTTAATGAAATAACCGATGTATTGAATATGTATGTATGTGAAA
AAGTTCGAATACCGTTGTTAGGATTACCAGCTCTCAAGAAATTCGACGTA
GTACGACTTAATTCGAATAAGATAGACAATACCAAAGTTTCAGCAATATC
GAATGACATTATTGAAAAGTATCCAAAATTGTTTGAGGGACTTGGTAAAA
TTAAAGGTGAACCTGTTAAAATTGAATTGATGGAAAACGTTACCCCATAT
CACATTAATGCACCAAGACGAATACCTTTACCAATGATGGAGCCAGTaaa
aaaaGAACTAGAGAGAATGGAATCCATGGGAGTGATTCGAAAAGTTGACA
AACCTACAGCATGGTGTCATCCCATGGTAGCTGTCCAAAAACCAACAATA
CCAGGCCAACCAGCAAGATTACGAATTTGTATTGACTTAACACAattaaa
caaaacaacGAAACGTGAATTTTACCAACTACCAAGTTGTGATGAGACAT
TAGCTCAAATTGGAGACAACGGCAAAGTATTTTCAAAACTAGACGCAAAT
TCAGGATATTGACAAATGCCTTTGAGTGAGGAGAGTCAATTAAAAGCAAC
TTTTACGACACCGTTTGGTCGTTATTGCCCAACTCGTGCACCGTTCGGAT
TGACATCAATGCCGGAGATATTCAGTAAAAAAATGGACGAAGTAGTAGAA
GGACTTGAAGGTGTGATTAAAAGTATGGATGATTTTCTAGTTTACGGTAA
AAACGTACAAGAACACGATGAGAATCTTGACAGACTGTTTAAAAAACTTG
AAGAGTATAACGTTACGttaaatgaacaaaaatgcAAATTTCGTCGAAGC
GAAGTAGAATTTCTCGGACATTTGATATCAGCAGAAGGTATAAAACCACT
TGCATCAAAAATTGAATCAATCATTGAATTTCCAACACCGACATGCATCA
CAGAGTTAAGGAGTTTTTTCGGTATGGCCCAGCAATTGGCACGATTTAGC
CCAAAGTTTTCGAAAACAGCAGAACCGCTGAGAGATTTACTAAGCAAAAA
GAATGATTGGTTATGGACTCCAGTACACGAGAACGCTTTTCAGGAGATAA
AAACTTTACTCTCTTCGCCACCAATATTGGCACATTACAATTGCAATCGT
GAGACGAAAATACGTACAGATTGTAGTAAAAAGAACGGACTTAGtgtaat
tttatttaaaaaatttgacaatgaatggAGACTAGTCGATAGTGCTTCGA
GGTGGTTGTCACCTGAGGAAAAGAACTATTTCCCTATTGAAATCGAAATG
CTGGGAGTCGCTTGGGGATGTGTTAAAATGGGAAAATATCTACAAGGGTT
GCCAAACTTCCTTGTAGAGACAGATCATAAACCGTTGATTCCAATTTTGA
ACAGTATTAGACATGTCACCCAGAATTCAATTATTGAGAATGAGGTTGCT
TAG Coding sequence (CDS) from alignment at sc0000216_pilon:612754..615456+ >XLOC_040661 ID=XLOC_040661|Name=XLOC_040661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5406bp|location=Sequence derived from alignment at sc0000216_pilon:612754..615456+ (Clytia hemisphaerica_ch_hm2_pilon)
ACATGGCGCTGCGAGCATGTGATTGTtgctgaaaagaagaaaattatagt
tttacaaaaatttttggtgTTCTTCAATGAAATGGCTGAAGAAGGAGGAG
CAGGAAGTGGAACTAATAAAGGTGGTTTCAAACCTCCTACACTTGACTTT
TCTGTGGATAGACATTATGCTTTCAAAATCTGGAAAGAAAAATGGGATGA
CTACTTGCTTTTGACTGATGGAGCTCAAAAACCAGCAGAATATAGAGCTG
CCATGATTAGATACTGTTTTTCTTCTGAGACAAGAAACATTTATGATTCA
TTAAATTTATCGGAGGCTGAGAAGAGAAATCCTGAGACAATAATCGACAA
ACTTGAGCAATTTGCTAAGGGAGTCATCAACGAAACATTAGAACGACATA
AATTCTTTGCCAGAAAACAGGAATCTGGTGAAAGTTTTGATGACTTTGTG
ACAGAATTGAaacttttgagcaaaaattgtaACTTTTGTGATACCCCACA
ATGCTACCCAAGTTTACTTCGAGATCGAATCATCAGTGGAATTTCAAGTG
ATGTTGTACGTGAGAAACTGTTGGCTGAACGAGATTTGACGTTGGCGAAG
ACACTCGAAATTTGTAAATCTGCAGAAACAGCATCCACTGGGATGTCAAC
CCTTCGAACCTCAAATACACAAGAACCTTCAGGAACTGCAGTAGACAGGG
TAGGAACTCAACATACtgatttttataacaacaataACAAGAGAAGTAAC
AATCAACAAACACGTCAATTTGGAGATGGTAAGAATCGAGTTAATTGTAA
ATTTTGTTCACGAAACCATGAATTTGGTAGGAAAAATTGCCCAGCCTGGG
GTAAAGAATGCAGAGACTGTGGGAAAGCAAACCATTTTTCGAATAGCAAA
GTTTGTCAGGGAAAACAGGCTGGGGGAGTACACCAACAAGAGAACAATGA
ACCTTTAGATCTTTTCTATCTGGGGGGTATTTCAGCGGGTAGTGTCGAGG
GGGTGGACGAGGTTGAATCTGAAAGTATCCAAACATCAGTACAATTTATG
CAAAATTGTTGGGAGACTGTTGTTCGTACCAAAGTAGGACAAGTACCTTT
TAAGATTGATACTGGAGCAGAAGTGACTGTAGTTGGTGAGAGACATTTGA
GTCCATTAGGAATAAACAAAGCTGCAATGAGATCAACAAATCGAAAACTT
GTTGGTCCAGATGGAAAACCCTTGAACTGTATAGGGTTCGTAGCAATCAA
AGTGTCATTTAATGAAATAACCGATGTATTGAATATGTATGTATGTGAAA
AAGTTCGAATACCGTTGTTAGGATTACCAGCTCTCAAGAAATTCGACGTA
GTACGACTTAATTCGAATAAGATAGACAATACCAAAGTTTCAGCAATATC
GAATGACATTATTGAAAAGTATCCAAAATTGTTTGAGGGACTTGGTAAAA
TTAAAGGTGAACCTGTTAAAATTGAATTGATGGAAAACGTTACCCCATAT
CACATTAATGCACCAAGACGAATACCTTTACCAATGATGGAGCCAGTaaa
aaaaGAACTAGAGAGAATGGAATCCATGGGAGTGATTCGAAAAGTTGACA
AACCTACAGCATGGTGTCATCCCATGGTAGCTGTCCAAAAACCAACAATA
CCAGGCCAACCAGCAAGATTACGAATTTGTATTGACTTAACACAattaaa
caaaacaacGAAACGTGAATTTTACCAACTACCAAGTTGTGATGAGACAT
TAGCTCAAATTGGAGACAACGGCAAAGTATTTTCAAAACTAGACGCAAAT
TCAGGATATTGACAAATGCCTTTGAGTGAGGAGAGTCAATTAAAAGCAAC
TTTTACGACACCGTTTGGTCGTTATTGCCCAACTCGTGCACCGTTCGGAT
TGACATCAATGCCGGAGATATTCAGTAAAAAAATGGACGAAGTAGTAGAA
GGACTTGAAGGTGTGATTAAAAGTATGGATGATTTTCTAGTTTACGGTAA
AAACGTACAAGAACACGATGAGAATCTTGACAGACTGTTTAAAAAACTTG
AAGAGTATAACGTTACGttaaatgaacaaaaatgcAAATTTCGTCGAAGC
GAAGTAGAATTTCTCGGACATTTGATATCAGCAGAAGGTATAAAACCACT
TGCATCAAAAATTGAATCAATCATTGAATTTCCAACACCGACATGCATCA
CAGAGTTAAGGAGTTTTTTCGGTATGGCCCAGCAATTGGCACGATTTAGC
CCAAAGTTTTCGAAAACAGCAGAACCGCTGAGAGATTTACTAAGCAAAAA
GAATGATTGGTTATGGACTCCAGTACACGAGAACGCTTTTCAGGAGATAA
AAACTTTACTCTCTTCGCCACCAATATTGGCACATTACAATTGCAATCGT
GAGACGAAAATACGTACAGATTGTAGTAAAAAGAACGGACTTAGtgtaat
tttatttaaaaaatttgacaatgaatggAGACTAGTCGATAGTGCTTCGA
GGTGGTTGTCACCTGAGGAAAAGAACTATTTCCCTATTGAAATCGAAATG
CTGGGAGTCGCTTGGGGATGTGTTAAAATGGGAAAATATCTACAAGGGTT
GCCAAACTTCCTTGTAGAGACAGATCATAAACCGTTGATTCCAATTTTGA
ACAGTATTAGACATGTCACCCAGAATTCAATTATTGAGAATGAGGTTGCT
TAGACATGGCGCTGCGAGCATGTGATTGTtgctgaaaagaagaaaattat
agttttacaaaaatttttggtgTTCTTCAATGAAATGGCTGAAGAAGGAG
GAGCAGGAAGTGGAACTAATAAAGGTGGTTTCAAACCTCCTACACTTGAC
TTTTCTGTGGATAGACATTATGCTTTCAAAATCTGGAAAGAAAAATGGGA
TGACTACTTGCTTTTGACTGATGGAGCTCAAAAACCAGCAGAATATAGAG
CTGCCATGATTAGATACTGTTTTTCTTCTGAGACAAGAAACATTTATGAT
TCATTAAATTTATCGGAGGCTGAGAAGAGAAATCCTGAGACAATAATCGA
CAAACTTGAGCAATTTGCTAAGGGAGTCATCAACGAAACATTAGAACGAC
ATAAATTCTTTGCCAGAAAACAGGAATCTGGTGAAAGTTTTGATGACTTT
GTGACAGAATTGAaacttttgagcaaaaattgtaACTTTTGTGATACCCC
ACAATGCTACCCAAGTTTACTTCGAGATCGAATCATCAGTGGAATTTCAA
GTGATGTTGTACGTGAGAAACTGTTGGCTGAACGAGATTTGACGTTGGCG
AAGACACTCGAAATTTGTAAATCTGCAGAAACAGCATCCACTGGGATGTC
AACCCTTCGAACCTCAAATACACAAGAACCTTCAGGAACTGCAGTAGACA
GGGTAGGAACTCAACATACtgatttttataacaacaataACAAGAGAAGT
AACAATCAACAAACACGTCAATTTGGAGATGGTAAGAATCGAGTTAATTG
TAAATTTTGTTCACGAAACCATGAATTTGGTAGGAAAAATTGCCCAGCCT
GGGGTAAAGAATGCAGAGACTGTGGGAAAGCAAACCATTTTTCGAATAGC
AAAGTTTGTCAGGGAAAACAGGCTGGGGGAGTACACCAACAAGAGAACAA
TGAACCTTTAGATCTTTTCTATCTGGGGGGTATTTCAGCGGGTAGTGTCG
AGGGGGTGGACGAGGTTGAATCTGAAAGTATCCAAACATCAGTACAATTT
ATGCAAAATTGTTGGGAGACTGTTGTTCGTACCAAAGTAGGACAAGTACC
TTTTAAGATTGATACTGGAGCAGAAGTGACTGTAGTTGGTGAGAGACATT
TGAGTCCATTAGGAATAAACAAAGCTGCAATGAGATCAACAAATCGAAAA
CTTGTTGGTCCAGATGGAAAACCCTTGAACTGTATAGGGTTCGTAGCAAT
CAAAGTGTCATTTAATGAAATAACCGATGTATTGAATATGTATGTATGTG
AAAAAGTTCGAATACCGTTGTTAGGATTACCAGCTCTCAAGAAATTCGAC
GTAGTACGACTTAATTCGAATAAGATAGACAATACCAAAGTTTCAGCAAT
ATCGAATGACATTATTGAAAAGTATCCAAAATTGTTTGAGGGACTTGGTA
AAATTAAAGGTGAACCTGTTAAAATTGAATTGATGGAAAACGTTACCCCA
TATCACATTAATGCACCAAGACGAATACCTTTACCAATGATGGAGCCAGT
aaaaaaaGAACTAGAGAGAATGGAATCCATGGGAGTGATTCGAAAAGTTG
ACAAACCTACAGCATGGTGTCATCCCATGGTAGCTGTCCAAAAACCAACA
ATACCAGGCCAACCAGCAAGATTACGAATTTGTATTGACTTAACACAatt
aaacaaaacaacGAAACGTGAATTTTACCAACTACCAAGTTGTGATGAGA
CATTAGCTCAAATTGGAGACAACGGCAAAGTATTTTCAAAACTAGACGCA
AATTCAGGATATTGACAAATGCCTTTGAGTGAGGAGAGTCAATTAAAAGC
AACTTTTACGACACCGTTTGGTCGTTATTGCCCAACTCGTGCACCGTTCG
GATTGACATCAATGCCGGAGATATTCAGTAAAAAAATGGACGAAGTAGTA
GAAGGACTTGAAGGTGTGATTAAAAGTATGGATGATTTTCTAGTTTACGG
TAAAAACGTACAAGAACACGATGAGAATCTTGACAGACTGTTTAAAAAAC
TTGAAGAGTATAACGTTACGttaaatgaacaaaaatgcAAATTTCGTCGA
AGCGAAGTAGAATTTCTCGGACATTTGATATCAGCAGAAGGTATAAAACC
ACTTGCATCAAAAATTGAATCAATCATTGAATTTCCAACACCGACATGCA
TCACAGAGTTAAGGAGTTTTTTCGGTATGGCCCAGCAATTGGCACGATTT
AGCCCAAAGTTTTCGAAAACAGCAGAACCGCTGAGAGATTTACTAAGCAA
AAAGAATGATTGGTTATGGACTCCAGTACACGAGAACGCTTTTCAGGAGA
TAAAAACTTTACTCTCTTCGCCACCAATATTGGCACATTACAATTGCAAT
CGTGAGACGAAAATACGTACAGATTGTAGTAAAAAGAACGGACTTAGtgt
aattttatttaaaaaatttgacaatgaatggAGACTAGTCGATAGTGCTT
CGAGGTGGTTGTCACCTGAGGAAAAGAACTATTTCCCTATTGAAATCGAA
ATGCTGGGAGTCGCTTGGGGATGTGTTAAAATGGGAAAATATCTACAAGG
GTTGCCAAACTTCCTTGTAGAGACAGATCATAAACCGTTGATTCCAATTT
TGAACAGTATTAGACATGTCACCCAGAATTCAATTATTGAGAATGAGGTT
GCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:612754..615456 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2703:1 |
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