|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000757_pilon:2834..7484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040660 ID=XLOC_040660|Name=XLOC_040660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4651bp|location=Sequence derived from alignment at sc0000757_pilon:2834..7484+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAAGCATGAAGTCACCCCGAACGAAAAAGGCAGTTGCGCAGAGACG
GGCCAATGCCAGAGCCAGGAGAGAAGCCAGGGAGCAGGATGTCAACGAGC
AGGATGTCAACGAGCAGTCCACAGCTTCTAGTCGGCCAAGAACCAGGTCA
CAAACCGCAGCTCAGCGTGAGCCACTCCCACCCAAGGTGCAACGTGTCGG
TAAGTTTGAGGTTTCCCGTTTCATTGCTGAGAATGGAATTATCGACGTTG
CTCACTTGTGGGCGGCAGGTCGCGCACGCATGGAGGCTGGGGAGAATGAC
CTGGCAAAATTTCTAATCGACCGCGAATCCAGGCCCAAAGAGATTTCCTC
CCTTTTTGAAGGCAACAGAAAGCTTGATGAGTCGCTCAGTCCTGCTGAAC
GCCCTCCCCCTCGCAAAAGAATGGAAGTCCTCAGGGAAGTCTTGCGTGGC
CATTGCATTGAGGGGTGTGGCGGCCGTTGGTTCACGTGCGCCATTGAGAT
CTTAGAACACAACAGGATTACGGTCGGCACGTACGCCAAGTCTATGAGGT
TGCTCTTTGAAAAGGGAAGGGGCAAGAGAAGAAACATGATGTTGACTGGG
CCCAAAGACTCCGGCAAAACCTTTCTAATGGACCCAGTCCGAAAAATATT
TAAGACTTTCTTAAACCCGGCCGACGACAAGTACACATGGCAAGATGCAG
AAGATTGCGAGGCCATGTTCTTTAATGATTTCCGCTGGTCTAAAAATATG
ATAAGGTGGAATGATTTGCTTGTACTGCTCGAGGGCCACCCTGTCCGCTT
TCCCGTTCCCAAAAACCAAAGGGCCAAAGACATTTTGTTTACGCGGGATG
TCCCAATATTTGCAACCAGCCGATCTACTGTCAGGCTTGGAAAGGGCGGT
GGATCCTACAATGACGACGTTGAGGAGGACGACAACAACGAGGGAGATGA
TGCTGTGAGCAGAGAGAATGGGATGATGAAAGTCCGATGGGTTGTTTACA
ATTTGCCATTCACCATCCGTAACATCGTTGAGCTGGAAGCGTGCCCAAGA
TGCTACGCAAACTTAGTGTTTTACGGTGATGCCACCGTGTAATTTTGTAT
AGTATTTATTAGTATTTATTCCGTCGTCATTGTAAGATACTTGATAAAAC
CCTTCACCGACCTAATCTCATGTGTACGCTTATAATTCTTTGCAAAGACT
ATTTCATAATATGCCCGATTTAAATTCCacgacactttgaaaatcttaat
tAAAAAAGCTGACAGTATTTTTTCATAATATCCCTGATTCTAATAATACA
GTCTAAAGAATGTTTTCCAGCTTCTCCGGCTACTTTGCGGTCCAAAGTCT
ACATTAATCCACAATTAACCACAGTTAACCGAGGGCTgctctttaaaaaa
gaaactttagatAATATTAATGTTCTTTATGAAAAAGGAGGAGGTTAACT
GTGGTTAACTGTGGTTAACTGTGGTTAACTGTGagtattatttgaaaaat
atcaagaaagaGCAACACAAGAGCATATGTAGCCAAAATCAATATCTCAG
CCTGCCACCAcgcctttttataattttgtccAACCGTTTCGGCATACTAC
CAATAATTCGGTCAATCATTCCAGCGTCAAAGTTCTCAATGGTTGCCTTC
ACCCGGGCACCCGGGCACTGAATTCGTTGAAACTTTCCTTAGTAATTCTG
TTATCCAATGCATCCTGCGAAAGTTTTCGACTGACCAAGTTAAAAAAGTT
CTCAATGGGATTAAGGTCTGGACTGCGCGGTGGAATGGAGAACACTTCGG
CTCCAATGTCCTTGATTGCCTTCTTAGCCTTGGCAGAATTTTGAACAGGA
CAACCGTCCTGTAAGAAAGCCTTACCCCGGATGTGTCGAGTAGATTGATA
GATTGCAGGGAATTCCTCACGCACCATTTTAGCGAAGCTGTCACCGTTCC
ATCTGTTGTGGTACTGGCGACAAAATACCACACCACGGTTCGGACAAATT
GCCACCATGAAATTGGACATGCGGCCCCCTGTACCTGCGCGTTTACCTTT
CGTCGTGCACTGGCCACTCAATCCTTCGGCTCTTCGACGCCAGGCCATAG
TTTTGGTGGAGCGGGCCTCATCATGTGGGTTGGTCTTGTGTGTGAACCCG
GTACCATCCAAATAGAAATTAATATGCTTCATCCAAAAGTTCTTTGGCAG
TTTCCGGGCATTCCGGGCAAATGCCAAACGTTTATGCAAGTCTGTGTTTT
TCATAATCCCTTTACGACGGGAGTGAAGATATCTGTAGCCATGTCTTCGC
ATAACTCTACCAACAGTGGCCATGGAAACTGTCTGGTCAATTCCGGCCTC
CACAGCAAGTCTGCGCAAAGTAAATGGGCCGATCGTGCTTCTCATACGTT
TGATGTGGCGAATAAGGTTTCTCTCGTCACGCGGGGTGAGTCTCCTTGGA
CGTCCAGGATTTAGTTTTCGTTTATCGTGTGGTCGGTTGAGCGGCCTCTT
CACATGTCTAAAAACGGTTGCACGGCTGTATTTTGGAAACTTCTTCATGA
TACGGCTGACCGGCATCTTCAACTCCACATACAGGAATCTCATGTACAGG
GAATCAGCGATGGAGACTTTGCTCTGTTTTTTCTGCGCATGCCATCCATT
TGTCGTTCAgtgattaattaattaattaagtaagtaagtagtttttcttt
tatttcatttattttttctgtaaagaGAAATGAGAAATATGTATATAGGT
AATAAACAATTGAACAAGATATTGAGGTAAAATAAAGGCGGCCGGGTCAC
TTCGTGATGTCGGTTAATCGCCTGCGTTTTTGTTTTTACTACGTTACAGT
TTGGTCCATACTTTCGCCTTTTACGAAACACCTGGCCGGGTGACAATGGT
ATTCTCAAAACGCCCCCACTGTAGGGCGAGGCCacgtgcaaaaaaaaaaa
caaaacaaaaaaaatttcataatcaaACATCACTTTTTGTCAGATAGGAT
ATAATGACAGTGCGGCGGATAGGATACTCCTTTATCAGGAATGCGACCCA
CTCATGCAAGGCCACACCCTTCCACACCCAtatttccaatcaaaacaaca
acaacaacaacaacaacaaggcACGCTAATTGCTTTAAGCGACCTCATTC
TTAAGTGTTGAcggcaaacaaaaaaaaattctcccccAGACACCATGTGA
AACTTAGAAGTCAAGCGGTGTGGAAACTaagtcttttttttgcaaaacac
tCAGACAATCATCTGCATAATATTGTGAGACTGACACCTCCCCCCACTCC
CCCAAGTCAATGTTGTTTGAATTCGAGAAGCGCTGACGGTCAAATTGCCT
CCCATATCCACAACATTGATTTGGGGGAGCGGGGGACCCTGAAATAACTG
GATAGTCTCACTATTTTCACAGATGATTGtctgaatttggaaaaaaaaaa
ttgaaaggggTTCCCTTGTATCTTACATCacagttttgaaaaagatgGAA
GCTCCCAGTTGCTAAGCCCACCAAAACATATCCGTCGACCATGTGCGAGC
GTTTGAGTGGTTTCAGAGTATACCAATTAGTTCGCCATGTCTTTTGGGTT
GTTTTGAGTTATAGCAAAgaataaaatgacgtcataagcgCGGGAAAATA
CGAAAATTCGCGCCGAATTCGCCACGTGCAGGGGTAGTCAGGCCTTGCAT
GAATTTCTCTCCCATAAAGAAGGTAATTTGACCATGGAACATGGTCCAAG
TATAAAAGAAGAACAACAAATCAGACATGCCTATTTGCATTCATAAAGCA
GTTACATCTACTATTTACAGGTATGTACATAAATAAAAAGTACTTTCTAT
CAATATCAAGATATAAACATATAAACAATAAGAAGCTTAAGTAAAATTTC
TAAACACAAGAATGATTCCGTTGAACTTTGGCAAACTTTAAAGTCTTGAC
TTGTGTATTGTTTACTGCCTTTCAGAATGAATGGAAAGGGAAAGCACACC
GGCACCAAAGCACCGCTAAGCTCATTGCAACCCCGACAGCTGCGCACAAC
GTACCTGATAACCTACAGCCAGGCCGACCTAACCAGATTCCCCGACCGAG
AAGACTTTGCACGACTGGTTGTGGGTCTGTTCAACGAGACGGAAGGTGTA
GGACGGGTTGATTATTGGGTCTGTGGCAAGGAGGAACACCGAAACACTTC
TGGGTATCATTACCATCTCGCCCTGAAGTTGACAGACGGTATCCGCTTTG
ATAGTGTCCAAGCCCGCCTGGTCGAGGAAAATGATGTGAAGGTCAATTTT
CGAGACGACTATGACCTGTATGTTTATGCACAGCGTTATTGCGTCAAAGA
GGACGACGGTGCTGTCTACAGCCCCAACCACCCCCCAGTTGAAAGCATGA
AGTCACCCCGAACGAAAAAGGCAGTTGCGCAGAGACGGGCCAATGCCAGA
GCCAGGAGAGAAGCCAGGGAGCAGGATGTCAACGAGCAGGATGTCAACGA
GCAGTCCACAGCTTCTAGTCGGCCAAGAACCAGGTCACAAACCGCAGCTC
AGCGTGAGCCACTCCCACCCAAGGTGCAACGTGTCGGTAAGTTTGAGGTT
TCCCGTTTCATTGCTGAGAATGGAATTATCGACGTTGCTCACTTGTGGGC
G Coding sequence (CDS) from alignment at sc0000757_pilon:2834..7484+ >XLOC_040660 ID=XLOC_040660|Name=XLOC_040660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000757_pilon:2834..7484+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAAGCATGAAGTCACCCCGAACGAAAAAGGCAGTTGCGCAGAGACG
GGCCAATGCCAGAGCCAGGAGAGAAGCCAGGGAGCAGGATGTCAACGAGC
AGGATGTCAACGAGCAGTCCACAGCTTCTAGTCGGCCAAGAACCAGGTTG
AAAGCATGAAGTCACCCCGAACGAAAAAGGCAGTTGCGCAGAGACGGGCC
AATGCCAGAGCCAGGAGAGAAGCCAGGGAGCAGGATGTCAACGAGCAGGA
TGTCAACGAGCAGTCCACAGCTTCTAGTCGGCCAAGAACCAGAGAAGCCA
GGGAGCAGGATGTCAACGAGCAGGATGTCAACGAGCAGTCCACAGCTTCT
AGTCGGCCAAGAACCAGGTCACAAACCGCAGCTCAGCGTGAGCCACTCCC
ACCCAAGGTGCAACGTGTCGGTAAGTTTGAGGTTTCCCGTTTCATTGCTG
AGAATGGAATTATCGACGTTGCTCACTTGTGGGCGAGAAGCCAGGGAGCA
GGATGTCAACGAGCAGGATGTCAACGAGCAGTCCACAGCTTCTAGTCGGC
CAAGAACCAGGTCACAAACCGCAGCTCAGCGTGAGCCACTCCCACCCAAG
GTGCAACGTGTCGGTAAGTTTGAGGTTTCCCGTTTCATTGCTGAGAATGG
AATTATCGACGTTGCTCACTTGTGGGCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000757_pilon | genome | sc0000757_pilon:2834..7484 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 148-339:4460 |
| Aaloc | 1-144:1 |
|
