XLOC_040651 (mRNA) -

Overview
NameXLOC_040651
Unique NameXLOC_040651
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000205_pilon:599501..600382-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040651 ID=XLOC_040651|Name=XLOC_040651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=882bp|location=Sequence derived from alignment at sc0000205_pilon:599501..600382- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAACTAATCCCACCATGTGGTCTCCATCTTATTTTGGCCCACCATAG ATATCTTTGGAAATTCATGCACGATATCATTAGCAAACGAAATCAAGAAT CTCTGATACCTGTTGCGCTACGGAAGATAGGATGTACCTATATAGCTTTC CAAATAGAAAGTTACTTTAACAGGTATTATTAGGCTATTTCAGGAAGAAT TGTTTTATACTGCTGTTAAGGATATCAAAACATTTGATGGCTACCCGTTG GATTTTTCAACAAGGGTGTACGATATTCTCTTTTTGAAACCCCCCCTCCC CGAAGCGGCCCTTATTATTGATACAAGTACATTGCACGTATTCATGATAA CATTTTACTGTGTTCTGAGAATTCTTGGAACAAAGGATCTTGTTTAGTAT TTCTATTTACGTTATTACTTAAAGTTTCCTAAAAAGTTCACAAACAGTAA ATTGGATTTCGAGAATTCATATTCATCGAGTCTATTATCGTCGGTAAACC CATAATCTTGGATGTGAGTAAAATTTCACGGCGGCACGAAGAATCTACTT TATCGGACATAAAGATGTCGTACTTATTTTCCGTCGAACAAAATCTTTTA CCTGAAAAAATTTTCGTCACCTCCAATAAAATATTTCGTCACTTTTGTCC TACATTTTTTTGCCCAAAAAGGTATATCATTGTAGTAATCACGTTTTTAT ATTTTTCAATTTTTAGCAAAAAGAAGCACTACGACGGTTCTGAAAAGTTA AAAATGATTGGTAACGACTGCAAACTTCTTGAAAGTAATATTGATACCTT TTTAAATGAATTTGTTGAGGACAAAGGCGATGATTGGAATTCTCCCCGTA GTCGGAAGCTGCTACAAGTCCTTAGACTTTAC

Coding sequence (CDS) from alignment at sc0000205_pilon:599501..600382-

>XLOC_040651 ID=XLOC_040651|Name=XLOC_040651|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000205_pilon:599501..600382- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAACTAATCCCACCATGTGGTCTCCATCTTATTTTGGCCCACCATAG
ATATCTTTGGAAATTCATGCACGATATCATTAGCAAACGAAATCAAGAAT
CTCTGATACCTGTTGCGCTACGGAAGATAGGATGTACCTATATAGCTTTC
CAAATAGAAAGTTACTTTAACAGATAGAACTAATCCCACCATGTGGTCTC
CATCTTATTTTGGCCCACCATAGATATCTTTGGAAATTCATGCACGATAT
CATTAGCAAACGAAATCAAGAATCTCTGATACCTGTTGCGCTACGGAAGA
TAGGATGTACCTATATAGCTTTCCAAATAGAAAGTTACTTTAACAGCAAA
AAGAAGCACTACGACGGTTCTGAAAAGTTAAAAATGATTGGTAACGACTG
CAAACTTCTTGAAAGTAATATTGATACCTTTTTAAATGAATTTGTTGAGG
ACAAAGGCGATGATTGGAATTCTCCCCGTAGTCGGAAGCTGCTACAAGTC
CTTAGACTTTACCAAAAAGAAGCACTACGACGGTTCTGAAAAGTTAAAAA
TGATTGGTAACGACTGCAAACTTCTTGAAAGTAATATTGATACCTTTTTA
AATGAATTTGTTGAGGACAAAGGCGATGATTGGAATTCTCCCCGTAGTCG
GAAGCTGCTACAAGTCCTTAGACTTTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040651XLOC_040651-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205_pilongenomesc0000205_pilon:599501..600382 -
Properties
Property NameValue
Aaloc175-339:166
Aaloc1-171:883