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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000490_pilon:79265..80801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040650 ID=XLOC_040650|Name=XLOC_040650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1537bp|location=Sequence derived from alignment at sc0000490_pilon:79265..80801- (Clytia hemisphaerica_ch_hm2_pilon)
TGCAACAAAGCTGTTAAGGCGAGAAATGAAAAGATTCATAAACTTGTTGA
ATATGCTTCATTTGGAGACATTTCAAGTATGTTTTTAGTGTTTTTGAACG
TATTCTAAGATGCCATAAATGATATTCAGTAAAATCTAGCCGATTATTGT
TCGTTCTGTTTTTGAGTTTGAGGTCTAAACAATTATCTATTTTTTGTTAT
TCAGCCAATTTTCAATTTTCTAGTACAGATAGAAATTACTTGAAAATTGT
TAAAATATGCCTTTGACCTTTACATAATTCTGCCAAGGTTCTACAAAGCC
TACGAAAGACAGAGACCAGAGGCAAGTTCGGGTCGACTTAAATGTCTCAC
CCCCATATAATTTGGAAAAATAACAATATAATTTTGTATCCCAATCAATA
AAAAAATCTGTTTTTGATAAGCCCGTTGGATTTTATTGCTCGTTATTTAT
CCCCACTGAAAAAAAAATTCCCACTGAGACAGGGGTGTAATAAGGTTTTT
TCTGACAGTCATTTCATTTCCTTACGTATTCAGGTTACGTTTCGTATGTT
TGCGATCATTACTTCGATACCATTGTGGAGTCAGCAATCCAAAGCTTATC
GGAAAATAATTTGAAAAAGTTTATAAAAACATTGAAAGTTGTGAAAAAAC
CCGTGACACTAGAGAGCAAAGAAACTGCTCGAATAATGATGGGGAAATAT
GATATGTCACAAAGAGCATTTAAAGAACTTAGAGCAACATTGAAATCTTG
TAATGTTACTTTACCATCGTACGATGATTTGAGAGAATATTGCAAAAATC
TTGAAGTTGGTAATATTTTTCCGTTGCATGGTAGTAATGAATCTGAGTGT
CAATGTATGGGCTACGGTTGTACTGTTAAAGATACTTTAGAGAGAGTTTT
TGGTTGTAACGAATATCAACATAAACTATCTTTCATCGAGGCTGATCGAA
ATAAAAAGCTTGGAGACTTTCTGAAATCGAAAAATACACATCTATATCAG
AATTTTAAAAATGAGAGGAGAACAATCATCCTCAGAGACACTGGCGATAA
TTTTCGTGGAGCAGGCCGTTATCCAACTGAACAGACATCGTTTTCAATCA
TGAATATTCAAGACTTAGTGAGTGGTCCCTACGGCCAATTCATAACTACC
TTATGGCGTGGTTCAGAAAGCCGCGAGACATTGGAGATGCATTGTAAGCA
TCACTACCAAGAACTTTCAGAACTGGTGAAAAATGGCGTTCGATTAACAT
TAAACGGAGAAGTCCCTGAAGAGTTTAATGTTGTCGTCTTTTTGGTTGCA
GATTTGGCGTTTGTAAAAGAAGTTCTGGGAAAATGTTCCTGCACTCAAGC
ATATGGCTGTTTCCATTGCAAGCTCAACATCAATCAATGGTCATCATGTA
AAGCAAAAATTGGAGAAAGTAGAACCATGAATGAAATGAATGTGATGGGA
TCAGCTGCACGAAGTAAACTTGGGGATGGTCCAAATAAAGACAGTGCTGC
ATACAAAAATTTAATTGCAAATAATTACGGTCAATGG Coding sequence (CDS) from alignment at sc0000490_pilon:79265..80801- >XLOC_040650 ID=XLOC_040650|Name=XLOC_040650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2160bp|location=Sequence derived from alignment at sc0000490_pilon:79265..80801- (Clytia hemisphaerica_ch_hm2_pilon)
TGCAACAAAGCTGTTAAGGCGAGAAATGAAAAGATTCATAAACTTGTTGA
ATATGCTTCATTTGGAGACATTTCAATGCAACAAAGCTGTTAAGGCGAGA
AATGAAAAGATTCATAAACTTGTTGAATATGCTTCATTTGGAGACATTTC
AAGTTACGTTTCGTATGTTTGCGATCATTACTTCGATACCATTGTGGAGT
CAGCAATCCAAAGCTTATCGGAAAATAATTTGAAAAAGTTTATAAAAACA
TTGAAAGTTGTGAAAAAACCCGTGACACTAGAGAGCAAAGAAACTGCTCG
AATAATGATGGGGAAATATGATATGTCACAAAGAGCATTTAAAGAACTTA
GAGCAACATTGAAATCTTGTAATGTTACTTTACCATCGTACGATGATTTG
AGAGAATATTGCAAAAATCTTGAAGTTGGTAATATTTTTCCGTTGCATGG
TAGTAATGAATCTGAGTGTCAATGTATGGGCTACGGTTGTACTGTTAAAG
ATACTTTAGAGAGAGTTTTTGGTTGTAACGAATATCAACATAAACTATCT
TTCATCGAGGCTGATCGAAATAAAAAGCTTGGAGACTTTCTGAAATCGAA
AAATACACATCTATATCAGAATTTTAAAAATGAGAGGAGAACAATCATCC
TCAGAGACACTGGCGATAATTTTCGTGGAGCAGGCCGTTATCCAACTGAA
CAGACATCGTTTTCAATCATGAATATTCAAGACTTAGTGAGTGGTCCCTA
CGGCCAATTCATAACTACCTTATGGCGTGGTTCAGAAAGCCGCGAGACAT
TGGAGATGCATTGTAAGCATCACTACCAAGAACTTTCAGAACTGGTGAAA
AATGGCGTTCGATTAACATTAAACGGAGAAGTCCCTGAAGAGTTTAATGT
TGTCGTCTTTTTGGTTGCAGATTTGGCGTTTGTAAAAGAAGTTCTGGGAA
AATGTTCCTGCACTCAAGCATATGGCTGTTTCCATTGCAAGCTCAACATC
AATCAATGGTCATCATGTAAAGCAAAAATTGGAGAAAGTAGAACCATGAA
TGAAATGAATGTGATGGGATCAGCTGCACGAAGTAAACTTGGGGATGGTC
CAAATAAAGACAGTGCTGCATACAAAAATTTAATTGCAAATAATTACGGT
CAATGGGTTACGTTTCGTATGTTTGCGATCATTACTTCGATACCATTGTG
GAGTCAGCAATCCAAAGCTTATCGGAAAATAATTTGAAAAAGTTTATAAA
AACATTGAAAGTTGTGAAAAAACCCGTGACACTAGAGAGCAAAGAAACTG
CTCGAATAATGATGGGGAAATATGATATGTCACAAAGAGCATTTAAAGAA
CTTAGAGCAACATTGAAATCTTGTAATGTTACTTTACCATCGTACGATGA
TTTGAGAGAATATTGCAAAAATCTTGAAGTTGGTAATATTTTTCCGTTGC
ATGGTAGTAATGAATCTGAGTGTCAATGTATGGGCTACGGTTGTACTGTT
AAAGATACTTTAGAGAGAGTTTTTGGTTGTAACGAATATCAACATAAACT
ATCTTTCATCGAGGCTGATCGAAATAAAAAGCTTGGAGACTTTCTGAAAT
CGAAAAATACACATCTATATCAGAATTTTAAAAATGAGAGGAGAACAATC
ATCCTCAGAGACACTGGCGATAATTTTCGTGGAGCAGGCCGTTATCCAAC
TGAACAGACATCGTTTTCAATCATGAATATTCAAGACTTAGTGAGTGGTC
CCTACGGCCAATTCATAACTACCTTATGGCGTGGTTCAGAAAGCCGCGAG
ACATTGGAGATGCATTGTAAGCATCACTACCAAGAACTTTCAGAACTGGT
GAAAAATGGCGTTCGATTAACATTAAACGGAGAAGTCCCTGAAGAGTTTA
ATGTTGTCGTCTTTTTGGTTGCAGATTTGGCGTTTGTAAAAGAAGTTCTG
GGAAAATGTTCCTGCACTCAAGCATATGGCTGTTTCCATTGCAAGCTCAA
CATCAATCAATGGTCATCATGTAAAGCAAAAATTGGAGAAAGTAGAACCA
TGAATGAAATGAATGTGATGGGATCAGCTGCACGAAGTAAACTTGGGGAT
GGTCCAAATAAAGACAGTGCTGCATACAAAAATTTAATTGCAAATAATTA
CGGTCAATGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000490_pilon | genome | sc0000490_pilon:79265..80801 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 79-1080:1003 |
| Aaloc | 1-75:1538 |
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