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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:849006..851617+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040603 ID=XLOC_040603|Name=XLOC_040603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2612bp|location=Sequence derived from alignment at sc0000041_pilon:849006..851617+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGGTCAACATCGACATTACCATTGGACAAGCATCAATATGAAGAC
TCTACTTTGCATCCAGGGTTTGTTGGTGATATTATGTTTTCATGCATCGA
AAGCACAAACAAAGGATTGCAATGAACTGATAACCAACCCTGATGCTTTC
ACAACAAGTATGTTTCAGTATGGGAAATTTGTCCGCCCTTATTTTCTGTT
TAATTAGGTCTAGCGTAGGCTTCTGACTTGTTCTTGAAACGAgttcggtt
ttttttaatcaacacTTTGATGGGTATAGAATTAAGTTTAGATTGAATTT
GTTGATGATCTGTCTGGAAATGAAACTTCCTTACTGTATAAACTTTAGCT
TGCTGGTTGTCATAATTCGTATATTTTAACAAATCTTTGATATCTTAGGA
AAATTTTACCGCAAACtattgtaattatttttcttttgaattaatttctc
aaaatattttgcagacAATCTTATATCTTTCTTTTGTGACTTCATTTTAG
CAGAAGACAACTAGATCTGCGAAATTTTATACCATAAAAGTAACATTTGC
GGTTGTACTTTAAATtagtcaaaaagtttttttacttaATAACAAAAGCT
TATCAATTGGACTATGTTCTACTGTCTTGCAAGGACAATTTGACTTGTCT
TTGCAGCTTAGTGTTTAATCATTTTCTTTTACAGGCCGGCAGTGTCATTT
TCCGTTTTATTACCGCCGTAAATGGTATTACACTTGTGCCAAGTCCAAGT
TGTACAATTTTTGTTCCGTCGATCGTGTTTATCGTGGAAAGTGGGCTGCT
TGCACCAGGGCTACTCGTAAGTATATTACTTTACTTGTTGGTGAATAAAA
AGGAAggtcttaaaaacaaaagacgTTCTTCATaacctgaaattttcatt
ttgcagAACCTTGATTACGAATACTCATGTAATAAGATAGCAGTCCAGTC
AAAAAACCCTGACTCGCTTGGAAGAATCGGATAAGAATCGAAATATTCTG
CAATTCCATCCAATAAACCATATCATACACTACACTGACCACCCCTCTTA
ACCGGGAAAACACCTCTAAATTCGGAAATTCCCAGTGACTTTTTTAGGTA
GAGAATAGAATAAAATATAAGTCCGTCTCTAAATTTAATAGTAAATGTGT
GTTAATCTTCTTCGGGGCTCTCGCAAACCCAACCGCGGCTTTTCACAAGG
TCACTGGCGAAAGTGTGTCAAGCTTCTTATTATTTCTCTTTCAGCGGACC
AATGTCAGAATCCGTTCTTTTACAAAGGAGTAAAGTATGAAGGGTGTTCA
ACAAGATTCAGTCCAGTCCCTTGGTGTTCATTGGACCGAAATCATAAACG
AGGGAAAAGTAAATTCGCATATTGCCCAAAGAACCTTCCAGGACGTACGT
AGTAaattcttgttttatttttatcctcGTTATGTGTATTCAAAGACAAA
ATGTCGTGATATTTTTAATCCTGTGCCAGGCAAATTTCCAGGGTTTTGAG
CTGCTACCGTCTTTATTTCAAAGATTAAGTTTGAATTCAGTTCGAAGAAC
AAAATAATCAACCCAGGCTCTGTTTAATTAGTTGGGAActattaaaacac
aaagaattaacTTCAGAATGGGCTTTTTCTGTTAATAAGGGCCTAGGACC
ATGTACAAAAATTAGGATTGAGTTTCAAAATTCAAGCAAAGAATGAGTTT
TTGCCACCGTTGTCTGGTAGCAGAAAAGGCCTGGAAATTGACCTGTGTGC
AAACAAGGTTCAAAGTGCTACTAATGTTTCATATTACTTTTAATAGACTT
AGTTCGACCTTTTTATCAAAAGAATTTATTCTACGTTATATAAGCAGTTC
AGTATTCCCCAGCAAGGCTATTACTGAAGCGTTGCAAGTGGCTTGCTTAA
GCACTGTGATATAGTGCGCAATATCCCGTTAGGCTTTTATAAAGACTTGA
CACTGTTGTTCAGCAGCATACTTGTTGGTAAATACATTGAAAGTTTTGCA
TCATTCTCAGCTTGAGATGATCACAACGGGACGTTTCACGTCACACAGTT
ATGTTTGTCACAAATTAAATTGTATGCACAGTTTTGCTCCTACCTAGAAA
GCATCGAACCTTCAAAGACATACTTTTTCTTAGGATGATTAAACTAAGAA
ATGTTAAGTCACATCTGGTCACAGTTGTTTCTAGACATCATTGTCATACA
AAAGCaacattttcaaatgtaaacgtGATCAAACAATACTTTTATCAACC
CTTAAAGTGTTAGGAGAATTTAAGGGTTGATAAATGTATTTTCCTAATTC
TTCTGCTTTTTCCTTTTACTCATTGTTACTCCCTAACTGAAGCAAATTCT
ATTTATCACCAAATTTTCAGGAAAGTACGCCCGCTTACATCTACAAAGAG
GTTTATGCAGGAAATCGTTGAGTTTGACATTCGACAAACCTGTCACTCAG
TTCAGATCAGGATGTTTGATCTACAAGTCTAAACGCTTGAATACGCTGAA
TTTTGTTGTCTCCAAAAGATGTTGCAGAATCAAGTCTTTTGGCTTCTACG
TTAGTTACAAAGGGGCTCCACCCAAACTCGTCAATGTCGAAATCCATGGT
AAAAGTATCTGC Coding sequence (CDS) from alignment at sc0000041_pilon:849006..851617+ >XLOC_040603 ID=XLOC_040603|Name=XLOC_040603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000041_pilon:849006..851617+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGGTCAACATCGACATTACCATTGGACAAGCATCAATATGAAGAC
TCTACTTTGCATCCAGGGTTTGTTGGTGATATTATGTTTTCATGCATCGA
AAGCACAAACAAAGGATTGCAATGAACTGATAACCAACCCTGATGCTTTC
ACAACAAATGGTCGGTCAACATCGACATTACCATTGGACAAGCATCAATA
TGAAGACTCTACTTTGCATCCAGGGTTTGTTGGTGATATTATGTTTTCAT
GCATCGAAAGCACAAACAAAGGATTGCAATGAACTGATAACCAACCCTGA
TGCTTTCACAACAAGCCGGCAGTGTCATTTTCCGTTTTATTACCGCCGTA
AATGGTATTACACTTGTGCCAAGTCCAAGTTGTACAATTTTTGTTCCGTC
GATCGTGTTTATCGTGGAAAGTGGGCTGCTTGCACCAGGGCTACTCGCCG
GCAGTGTCATTTTCCGTTTTATTACCGCCGTAAATGGTATTACACTTGTG
CCAAGTCCAAGTTGTACAATTTTTGTTCCGTCGATCGTGTTTATCGTGGA
AAGTGGGCTGCTTGCACCAGGGCTACTCCGGACCAATGTCAGAATCCGTT
CTTTTACAAAGGAGTAAAGTATGAAGGGTGTTCAACAAGATTCAGTCCAG
TCCCTTGGTGTTCATTGGACCGAAATCATAAACGAGGGAAAAGTAAATTC
GCATATTGCCCAAAGAACCTTCCAGGACCGGACCAATGTCAGAATCCGTT
CTTTTACAAAGGAGTAAAGTATGAAGGGTGTTCAACAAGATTCAGTCCAG
TCCCTTGGTGTTCATTGGACCGAAATCATAAACGAGGGAAAAGTAAATTC
GCATATTGCCCAAAGAACCTTCCAGGACGAAAGTACGCCCGCTTACATCT
ACAAAGAGGTTTATGCAGGAAATCGTTGAGTTTGACATTCGACAAACCTG
TCACTCAGTTCAGATCAGGATGTTTGATCTACAAGTCTAAACGCTTGAAT
ACGCTGAATTTTGTTGTCTCCAAAAGATGTTGCAGAATCAAGTCTTTTGG
CTTCTACGTTAGTTACAAAGGGGCTCCACCCAAACTCGTCAATGTCGAAA
TCCATGGTAAAAGTATCTGCGAAAGTACGCCCGCTTACATCTACAAAGAG
GTTTATGCAGGAAATCGTTGAGTTTGACATTCGACAAACCTGTCACTCAG
TTCAGATCAGGATGTTTGATCTACAAGTCTAAACGCTTGAATACGCTGAA
TTTTGTTGTCTCCAAAAGATGTTGCAGAATCAAGTCTTTTGGCTTCTACG
TTAGTTACAAAGGGGCTCCACCCAAACTCGTCAATGTCGAAATCCATGGT
AAAAGTATCTGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:849006..851617 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 442-681:2373 |
| Aaloc | 292-438:1247 |
| Aaloc | 160-288:687 |
| Aaloc | 1-156:1 |
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