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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:741348..746021+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040597 ID=XLOC_040597|Name=XLOC_040597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4674bp|location=Sequence derived from alignment at sc0000041_pilon:741348..746021+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCCACTCTGTCAATTATAAAATTTAGTACTCCGTTGAATTTAAAGGT
AAGACGTCTGAGAGTAGGGGATTAATAATAATGCCAGAAATGTTTTATTC
GTATTCCTTCCATGTATTGAAATCAATAATATCTTCCATCgttcttttta
aatcaatcttacattgggctattccagaaatagtttgCAAGGAGGcttga
cgtccagggtggtctggaaaataaaaaatccaggcgTCTGGTATGGTTTT
TCGcgtgtaaaaatccagggtgtaCAGTTAAAATTAAGTGCAAAActagg
gtggtcagtaaaacggaGTCgaaaatccaaggtggtccaaaaatacaaaa
gaaaatcatagggggccttgaaaaattagaaaaaaaatccaggggatCAA
ATGGAAGATTAAAAATAATACCAGGGGATTAAAAACAATACCAAAACTGT
TTCATCCATACTCTAAGGTCCAGAACAACCTGGTTTTAGTCTATAATCAC
CCTTTTTTGGGTGGTTAGAGGTACAATTTCCCGACAATTTCCAAACCCTA
GGCAATTATGCCCTCCCTCCCGTTTATTatgttttgtaaaatttcggACA
TCCTTACTATCAGTAGCGTGGCGGGTCGACTAAAACTTAGGAGGCAATTT
CGAAAGTTGGGATTTTGGTGCCCCCTTTAAATTAACCACGAAAGTTTTTG
GGTACTTTTCTCTTTTTGGCCTAAAACAGCCTATTCTAAGTTGTAATATA
AAGCAAAGAggcaaaaaaatgagtaatcaaAGGTGCCTTTTTCCATCCCT
TGAGGGGAGGGTTGCAGTTGCCCCGTTTAGAGCAGTTTAGCTTTTTAGAG
CAGTTTAGACCGgttaattacaattttttcatgcCTTGTACGACCCAATT
TCGCCGTTTGCCGGCTAAATAAGGTCCctgaataaatgaatgaaatgCCT
TAATCCTGGCTTTGTGTTTTATATCTTGCTTAAGTTGGATAACtgactac
tcttgtctcccgaatagacgttcTTAGAAAGGATTATCCTTTAGAGACCG
AggaaaacaatcaaatttttCTGTTATCTAACTTTCCCAAGTGGAGAtaa
tgaagatttttcaaaaaatggattttaataACGTTCTTCAATTGATATTC
CATTGTTTGTTTGTTAAAATGGAATGAACCAAAAATTAATTCGATGATAA
GATTAGAAATAACTTTAGGAAATAATTGTACATCGAATAGCTGAGAGTTG
AATCAGCGCAGATCAAACGAAGGCTACCAACATACCATCCCCTCTAATTA
ATGTGAATAAATATATGTGAATCAGCAAAGTGTTTTGAGGCGGGAATCTT
TGAAATCATCATCAGAATCTGAAAGGGGGAAAAtatacacgcttcttttt
tttataagaatacactttataagaatgtccatgatgaaaatggccaaaaa
attaagaattattttaagaatatcaccattatAGAATTTGGCTACCAAGC
CGCAAGAAtcccatttttagagcattttcaattataaattgccaattgcC
CCCAAATGAGGCTCACTccttcacaaaaatgtcattttatgcttgagacg
tatctACTAAATGTTGAATCTAGTGTCTAAATTAGGATCCTAATCTAAGA
Atactgtaaaaatattttagaatgattttcccaaaaaagttaaaaatatt
catgatgaaatggatttacaccattctaataaaaaaagcgtgtaccacAA
AGACCTGCTTAGCAAATTGTTTTGGGGTCTGAATTGGCTCCCTCATGACA
ATAACTCTTTTCAGGAATGAACGCAAACTAGACCATGGAAAATTATCTTT
TCGAGTAACCGGGAGttttttctactaatttctttcttttattttttagg
cGATGACAGGTCAAATATTGTGTAGCTGTTTGGTGCTTAATCTAATAGTG
CTTATAGTAAGTGTTTTCCTTATCTTCATGTCCTGAAGGTTGGGAGTTGC
TTGAGTAAATGAATGGATACGGGAATGTACACTCAAAAGGCTAAATTCCA
GGAAAAAGCTCCGATAAGGGTCTTAAAATTCCTAATTTCTCCTCGatttt
ggcccatattttccaatattttttatttttccatattttctAAAGATTGT
ATACAAGTACTATTTAACTTCAATCAatgtcataatatttgagaaaatag
agaaattcccacgaaatcttacaaccacaaacgatttggaagcgctctaa
attaggttagaagggtagagttttaacatgaaacTTAGGACTTAGGAGGA
CCTTAGTATCCGAGGATCCGAAAGTCCAAGAAttgtccaatagggctcag
aatatagcctggaagtctataaacccctcccgaattgaaatattcgaata
catttatcaattagcccaaaagcgactttctcgcccgaactttagattgc
taaaaacgagaaattaaccaaaattcccaatatattttgaccgagatagT
TGGCAATCTACTGATAGTGCTCGTGTGaattgatattaatgattatttat
aaatattattatttataaaaattccaaatatcaataagcggggggggggg
gtggaataagaatgtcctgggtcgataattttcgaaaaattaattagcgg
ggggggacggctattaggtacccgagagtacgaattcttttttaatgaat
tgACTGAAATTTAATCTTGTTTAAGTCATGTCACCCAGCCAAAGCACCAA
AAGAGCGTGATAGACGTCAACTGATGATGATGCAAGACCCTGGGTTGGTA
CAAGAAGAGGTAGCTTATATGAAAGAATGGGCTGACCAACCTGTTGAACT
TGGTTTCTTTGTCAACTCTCGCCCAGCTGGTGATTCCGATGGTAAGGTTT
TACTCTGTGTCtttttttATCCATTAACGtgattatcagatgatttttga
tatttggcttagagataaCTTTTATGGTCCAGAGAGACCCCTCTAAATCT
TTTTtgatccaatttttttcaaccaatttcaaattcaacctAAAGAAAgt
gtacccagctggcacacaacgttgttttaacgttcatctaaagtTATATG
GAGGTTGTGAGCGttatataaacgttgaaacaacgttgtgtgccagctgg
gtaaagactcatttttagagatttcaaagtctcagctttggaaaaaaatt
gggtcAAAAGATTTAAAGATGTCTCTCTggaccataaaaggtatctctaa
gccaaatataaaaaattatctgATAATCACGTTAATGTTATGTTTACGCC
ATGCCATAAAGCTTGTATTGGCAAAGCTTGACTCTAATTACATGTTGCTG
ATTTAGAAATAACTTTTTCTCGATAACTCAGTAACAAGAGTTCCTTTGCA
TTTTTCTTATCAGAAAGGGGAGGGGTACACTTTACAGCAAAACAGTGGTC
TTTTTTAATGTCAGTGTTGTATACCTATTCTAATGATTTCAACTCGAGAT
TGTGGTCGAAGAAACTCGTTTTTTATGCAAACCGTTTCTTTTAGTCAGTG
TTCTCAGGCTCTTAGTAAATTGATCTAAGAAAGCTCTTACTCAGCCCTGA
AAGTATAGCTCAAActtaaatttgtcatttttcggTCAGATAAAGTTCAC
CAAATCTTGCCCAGGTATTAATGAATGAATGTTCATTCGATAACTCTATT
TTAGAACCTGCTCAATCAGCTGCACGCCGTAACCTGATCACTGATAAACC
GTCAGCACATGACGAAGGAAGCGGTGCTGGTTCAGAATTCCGTCGTGACG
AGATCTTaaaaaaaCCGACGGCACCTTTGAATAATGACGAAATGAACACA
CTAACTGGTGAAGTTAGGAGCAAACTCGAAAAATCCAAACCCATCGAACA
ATCAGTAGAGGACCCTGGAGATAGAAGAAAGGTATTaatcaaattcttat
tttttgttgaaactaATTAAATCTTAGATATTTATTGGTAGTACCTCTTT
CAGGTTATAACGCAGAGTTTTACATTTGACTTTTGTTAATTCGAACTTGA
ACGGGGAATCTTAATTTTTCGTCGAATTACAGAgtgattcgaattataga
aagaattGAATAATAAAGGTTTGAATGAGCAAGAGTCTATTGTATGTTCT
TTTATACAAGGTACACGCTCacaaaacattttctctttttaaaataGCTC
AAGTAGAAGAAAAGAGATGAAGGCTTAAATATCCCTTCCCTGAATTGCTA
AAACACACTATTAAGATTAAACCAGCAAGTTAGCTtcaatatatcttttt
ttgaatgccgtgaattataaatttgtttattttaggCACGCTCTAGTGTC
ACGTGTCAGGGCCAAAAGGAATGGATTCAATGTGACGGCCCGTACGAACT
CATTAAAATACAAGACGCATTTTGGGGCCGCGATGACACGCAAACTTGTA
CCAAAAGTGACGTAGCACGTGGTTTCAAGACCGGTCAAAAGTGTGTTCAA
GAAAGTGATAACGTGATGAAGAAAGTTCGTGAGGCGTGCGATAATGAAAA
CGTGTGCGAAGTCGTCGCTTCTAACATTTATTTCGATCAAACAGACTGTC
CAGatgtttataaatttttaagacTGAAATGGCAATGTGCTCCTAGTGAA
TCTAGGATCAAGGAAACAGCATAG Coding sequence (CDS) from alignment at sc0000041_pilon:741348..746021+ >XLOC_040597 ID=XLOC_040597|Name=XLOC_040597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1674bp|location=Sequence derived from alignment at sc0000041_pilon:741348..746021+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCCACTCTGTCAATTATAAAATTTAGTACTCCGTTGAATTTAAAGGA
TGCCACTCTGTCAATTATAAAATTTAGTACTCCGTTGAATTTAAAGgcGA
TGACAGGTCAAATATTGTGTAGCTGTTTGGTGCTTAATCTAATAGTGCTT
ATAgcGATGACAGGTCAAATATTGTGTAGCTGTTTGGTGCTTAATCTAAT
AGTGCTTATATCATGTCACCCAGCCAAAGCACCAAAAGAGCGTGATAGAC
GTCAACTGATGATGATGCAAGACCCTGGGTTGGTACAAGAAGAGGTAGCT
TATATGAAAGAATGGGCTGACCAACCTGTTGAACTTGGTTTCTTTGTCAA
CTCTCGCCCAGCTGGTGATTCCGATGTCATGTCACCCAGCCAAAGCACCA
AAAGAGCGTGATAGACGTCAACTGATGATGATGCAAGACCCTGGGTTGGT
ACAAGAAGAGGTAGCTTATATGAAAGAATGGGCTGACCAACCTGTTGAAC
TTGGTTTCTTTGTCAACTCTCGCCCAGCTGGTGATTCCGATGAACCTGCT
CAATCAGCTGCACGCCGTAACCTGATCACTGATAAACCGTCAGCACATGA
CGAAGGAAGCGGTGCTGGTTCAGAATTCCGTCGTGACGAGATCTTaaaaa
aaCCGACGGCACCTTTGAATAATGACGAAATGAACACACTAACTGGTGAA
GTTAGGAGCAAACTCGAAAAATCCAAACCCATCGAACAATCAGTAGAGGA
CCCTGGAGATAGAAGAAAGAACCTGCTCAATCAGCTGCACGCCGTAACCT
GATCACTGATAAACCGTCAGCACATGACGAAGGAAGCGGTGCTGGTTCAG
AATTCCGTCGTGACGAGATCTTaaaaaaaCCGACGGCACCTTTGAATAAT
GACGAAATGAACACACTAACTGGTGAAGTTAGGAGCAAACTCGAAAAATC
CAAACCCATCGAACAATCAGTAGAGGACCCTGGAGATAGAAGAAAGgCAC
GCTCTAGTGTCACGTGTCAGGGCCAAAAGGAATGGATTCAATGTGACGGC
CCGTACGAACTCATTAAAATACAAGACGCATTTTGGGGCCGCGATGACAC
GCAAACTTGTACCAAAAGTGACGTAGCACGTGGTTTCAAGACCGGTCAAA
AGTGTGTTCAAGAAAGTGATAACGTGATGAAGAAAGTTCGTGAGGCGTGC
GATAATGAAAACGTGTGCGAAGTCGTCGCTTCTAACATTTATTTCGATCA
AACAGACTGTCCAGatgtttataaatttttaagacTGAAATGGCAATGTG
CTCCTAGTGAATCTAGGATCAAGGAAACAGCATAGgCACGCTCTAGTGTC
ACGTGTCAGGGCCAAAAGGAATGGATTCAATGTGACGGCCCGTACGAACT
CATTAAAATACAAGACGCATTTTGGGGCCGCGATGACACGCAAACTTGTA
CCAAAAGTGACGTAGCACGTGGTTTCAAGACCGGTCAAAAGTGTGTTCAA
GAAAGTGATAACGTGATGAAGAAAGTTCGTGAGGCGTGCGATAATGAAAA
CGTGTGCGAAGTCGTCGCTTCTAACATTTATTTCGATCAAACAGACTGTC
CAGatgtttataaatttttaagacTGAAATGGCAATGTGCTCCTAGTGAA
TCTAGGATCAAGGAAACAGCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:741348..746021 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-840:4336 |
| Aaloc | 277-501:3707 |
| Aaloc | 109-273:2726 |
| Aaloc | 52-108:1900 |
| Aaloc | 4-51:1 |
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