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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:1070841..1072136+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040567 ID=XLOC_040567|Name=XLOC_040567|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1296bp|location=Sequence derived from alignment at sc0000105_pilon:1070841..1072136+ (Clytia hemisphaerica_ch_hm2_pilon)
atggCTGCAGCAAAGAAAAACGTAAAGAAAGTTTACACAGATATCGACGA
AATTCTTGATGTTGTTTTTGAAAGTGACAACTCAGATATTGATCTAGGTG
ATGAAAGTAATAGTGACAGTGACTGGGAGTATGATGGAGATGATCAAGTT
gaagaaaatgaccaaaatctTCCTGTTGAAGACCTTCCCAACGTCGACCA
AGCTGACAACAGCCCCGACAGTGAGGAAGAGATGGACATAGATGATAATG
AAATAAATGACTCTATTCCAGAAGAAACAGACGAATCTGTTGTTGAATCT
GATTCTGGTAGTGAAGATGATGAACCCCTTGCAAGATTTGCCCAACGTAA
TTTACCGAACAACCGTGTACAAGCCATAAGAGGACGTGCTAATCGTGGCC
GTGGTCGTGGTCCAGGACGTGGAATCCAGAGAGGAGCTGGACGTGTCAGA
GGTGGCCGGAGATTTTCTTTAGAAGGAAATGAAAACCCGAACTTAGTTGA
GCGTGGTAGAGGGAGGGCGCAGGGCCAACGTCGTGGACGTGCACGTGGTT
TTAGAAGAAGAGGACGTGGTTGTGGAAGAGGAGTGCGCGGTAGACAACAA
GCTCGTGGTGTTGATAATGCGGATCAACCTGCTGACGATATCGAAGACCC
GGAAGGAGACCTTGATTGGACCAATATAGAACTTGATCAAGAAGTGACAG
AGAATGATGACtttctatttttggaaaatgagGGACTCAACGTTCGTTTA
GACCCGAACAGTAGTGAACTTGATTTTTTGGAACTTTATTTGACTGACGA
AATTCTACAACGAAATTGTCAGAGAAACAAACCGGTTCGCTGCCCAATTT
ATTGAATCCAATCCTGATAAAGAGGAAAGTCGTTATGTTGGTTCTTGGTC
TGATGTTACCAAGGAAGAAATAAAAGCATTTCTTGCACTCATAATCATGA
TGGGCATAGTTCACAAGCCTGACGTCAACTCGTACTGTTCGTTAGACGAG
CTATTATCGACACCTTCCTTTTCTACAATTATGAATCCGCGACCGgttca
aattgattttaaaatttctccATTTCAATGATAACAGTACCTATGATCCT
CAAGACCCTGATCGTGATCGTCTTCATAAAGTGAGACCTATCCTGGACAT
TCTGCGGAATCGATTTAGAACTGTATATAACCCAGGAAAAAACCTTAGCG
TTGACGAATCGCTCGTCTTGTTCAAAGGCCGACTCCATTTCCGCCAATAC
ATCAAGACCAAACGGGCTCGCTTTGGCATCAAGTTATACGAATTGA Coding sequence (CDS) from alignment at sc0000105_pilon:1070841..1072136+ >XLOC_040567 ID=XLOC_040567|Name=XLOC_040567|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000105_pilon:1070841..1072136+ (Clytia hemisphaerica_ch_hm2_pilon)
atggCTGCAGCAAAGAAAAACGTAAAGAAAGTTTACACAGATATCGACGA
AATTCTTGATGTTGTTTTTGAAAGTGACAACTCAGATATTGATCTAGGTG
ATGAAAGTAATAGTGACAGTGACTGGGAGTATGATGGAGATGATCAAGTT
gaagaaaatgaccaaaatctTCCTGTTGAAGACCTTCCCAACGTCGACCA
AGCTGACAACAGCCCCGACAGTGAGGAAGAGATGGACATAGATGATAATG
AAATAAATGACTCTATTCCAGAAGAAACAGACGAATCTGTTGTTGAATCT
GATTCTGGTAGTGAAGATGATGAACCCCTTGCAAGATTTGCCCAACGTAA
TTTACCGAACAACCGTGTACAAGCCATAAGAGGACGTGCTAATCGTGGCC
GTGGTCGTGGTCCAGGACGTGGAATCCAGAGAGGAGCTGGACGTGTCAGA
GGTGGCCGGAGATTTTCTTTAGAAGGAAATGAAAACCCGAACTTAGTTGA
GCGTGGTAGAGGGAGGGCGCAGGGCCAACGTCGTGGACGTGCACGTGGTT
TTAGAAGAAGAGGACGTGGTTGTGGAAGAGGAGTGCGCGGTAGACAACAA
GCTCGTGGTGTTGATAATGCGGATCAACCTGCTGACGATATCGAAGACCC
GGAAGGAGACCTTGATTGGACCAATATAGAACTTGATCAAGAAGTGACAG
AGAATGATGACtttctatttttggaaaatgagGGACTCAACGTTCGTTTA
GACCCGAACAGTAGTGAACTTGATTTTTTGGAACTTTATTTGACTGACGA
AATTCTACAACGAAATTGTCAGAGAAACAAACCGGTTCGCTGCCCAATTT
ATTGAATCCAATCCTGATAAAGAGGAAAGTCGTTATGTTGGTTCTTGGTC
TGATGTTACCAAGGAAGAAATAAAAGCATTTCTTGCACTCATAATCATGA
TGGGCATAGTTCACAAGCCTGACGTCAACTCGTACTGTTCGTTAGACGAG
CTATTATCGACACCTTCCTTTTCTACAATTATGAATCCGCGACCGgttca
aattgattttaaaatttctccATTTCAATGATAACAGTACCTATGATCCT
CAAGACCCTGATCGTGATCGTCTTCATAAAGTGAGACCTATCCTGGACAT
TCTGCGGAATCGATTTAGAACTGTATATAACCCAGGAAAAAACCTTAGCG
TTGACGAATCGCTCGTCTTGTTCAAAGGCCGACTCCATTTCCGCCAATAC
ATCAAGACCAAACGGGCTCGCTTTGGCATCAAGTTATACGAATTGAatgg
CTGCAGCAAAGAAAAACGTAAAGAAAGTTTACACAGATATCGACGAAATT
CTTGATGTTGTTTTTGAAAGTGACAACTCAGATATTGATCTAGGTGATGA
AAGTAATAGTGACAGTGACTGGGAGTATGATGGAGATGATCAAGTTgaag
aaaatgaccaaaatctTCCTGTTGAAGACCTTCCCAACGTCGACCAAGCT
GACAACAGCCCCGACAGTGAGGAAGAGATGGACATAGATGATAATGAAAT
AAATGACTCTATTCCAGAAGAAACAGACGAATCTGTTGTTGAATCTGATT
CTGGTAGTGAAGATGATGAACCCCTTGCAAGATTTGCCCAACGTAATTTA
CCGAACAACCGTGTACAAGCCATAAGAGGACGTGCTAATCGTGGCCGTGG
TCGTGGTCCAGGACGTGGAATCCAGAGAGGAGCTGGACGTGTCAGAGGTG
GCCGGAGATTTTCTTTAGAAGGAAATGAAAACCCGAACTTAGTTGAGCGT
GGTAGAGGGAGGGCGCAGGGCCAACGTCGTGGACGTGCACGTGGTTTTAG
AAGAAGAGGACGTGGTTGTGGAAGAGGAGTGCGCGGTAGACAACAAGCTC
GTGGTGTTGATAATGCGGATCAACCTGCTGACGATATCGAAGACCCGGAA
GGAGACCTTGATTGGACCAATATAGAACTTGATCAAGAAGTGACAGAGAA
TGATGACtttctatttttggaaaatgagGGACTCAACGTTCGTTTAGACC
CGAACAGTAGTGAACTTGATTTTTTGGAACTTTATTTGACTGACGAAATT
CTACAACGAAATTGTCAGAGAAACAAACCGGTTCGCTGCCCAATTTATTG
AATCCAATCCTGATAAAGAGGAAAGTCGTTATGTTGGTTCTTGGTCTGAT
GTTACCAAGGAAGAAATAAAAGCATTTCTTGCACTCATAATCATGATGGG
CATAGTTCACAAGCCTGACGTCAACTCGTACTGTTCGTTAGACGAGCTAT
TATCGACACCTTCCTTTTCTACAATTATGAATCCGCGACCGgttcaaatt
gattttaaaatttctccATTTCAATGATAACAGTACCTATGATCCTCAAG
ACCCTGATCGTGATCGTCTTCATAAAGTGAGACCTATCCTGGACATTCTG
CGGAATCGATTTAGAACTGTATATAACCCAGGAAAAAACCTTAGCGTTGA
CGAATCGCTCGTCTTGTTCAAAGGCCGACTCCATTTCCGCCAATACATCA
AGACCAAACGGGCTCGCTTTGGCATCAAGTTATACGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:1070841..1072136 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1186-1293:1189 |
| Aaloc | 1036-1185:1038 |
| Aaloc | 799-1035:800 |
| Aaloc | 1-798:1 |
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