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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:802126..804693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040554 ID=XLOC_040554|Name=XLOC_040554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2568bp|location=Sequence derived from alignment at sc0000105_pilon:802126..804693- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTTGACGTTAAGAAAGAGAACACAGGAAATAAACATTCCATTTC
AACAATTTTCATGACTTTCGGACAGTTTTTGGACCACGACATCACGGACA
CACCCAGTGAAGGCTGTCACGCCCAAACGTAAGTCTCGTTTGATTCAGCA
ATCACTTCTTGTCCTTCCCAACCAATCTGACCTGTCTATATATGTAAAGT
ATCCACAAAATGGCCTTCTTTTGGTCTTCATTTTCCTCCGAAGTGACCTG
TTCAGTGAAATTCGTAAATTTTCTTCTCCATTACTTGAATTCTTTATTTC
AATTTTTTTATCAAATAATTTTCACAGTGATACACTTTTTGTCCACATGG
CTATTCAATTCATCATCATATTCTTATCTTAGGTGTGATCAAGTTGCATC
CTTCAAATATCCTTGTTTCTCTATCTTGTGGGACGAGAACAACTACTCCA
AGTGCACTCCATTTGGAAGATCGCGCGCCATCTGTAGACGGAGAAAGGGA
ACACGACAACAGGTCAATATTTTGACCTCCTTCGTAGATGGCTCACAAAT
TTATGGCGCAAAGAAAGAACTTTTCCACGATTTACGTAAAAATGATGGTA
AGTAAGAATTATTCTGAAGCTTTTTTACCTCTAAGTTACCCTTCGAAAAA
GTAAAGTGTAAAATGACGAAATATTGCGCCAGCGAATACTTTTAAACGTC
ACCTTTTATATTACACAATCACGCAAAAAAAATACAAATCACGTTATCAC
GAGTTAAATTTTCTTTCTATCACGATAAAGTTAATCACGTTGGTTCCTCT
GATCGCACGCAACCACGCACTTTAAAATCTTAAATCCTGCCATCATGAAA
ACCACTGGAAGGCCTCTATTAGTTTAATATTTTTGTATCTTTGAGGAACT
CCAAAAACCATTATCTCAACAGTTAAACAATGTAGACTTGAATCTACATT
TATACTACTTACGCCCTTCTAAAGTTGGAAACTGGTCATCACGTACTCCT
TCTCTTCTTTCATTCTAGGATCAGGTCTCATGAAACTAAAGGACAACTTG
ATGGAATTAGATCCAAAAATCAAACATTGCCACACACATGGTGGATGTTC
ATTGGTGGGTGACCACAGAGGTGATGAAAACATCGCCCTTCATTCAATGC
ACACCTTATGGGTTCGCGAACATAATCGTATTGCGAAAGAACTCAAAGAG
CTGAACCCTCACTGGGACGGAGAACGTGTGTTCCAGGAAGCACGAAAAAT
CAATACAGCTGTTCTCCAACATATTGTTTTTAAAGAATGGTTGCCAATGA
TCGTGCGACCTTTCCGATACAGAGGATACAGACCACGAGTCAATCCCAAC
ATCATTAACTCATTTGCTACCGCAGCCTTCCGTTTCGGACACAGTTTGAT
TCCAAACTCCTTTGAACTGTTAGACAAAAACTTTGACCCCATCAACAAGC
CAATCACACTTCAGCACGCCTTTTTCAACCGAAAACCAATCAATCAGTAC
GGTATCGAACCGACCATGTTTGGGTTGCTAGGTAACAAGTCTGAAGAAGT
CGATACTGATTTTTCTTTCTCCATCGCACGTCGTTTGTTTGTCGCTCCCG
GCAAAGAAGACCATGTGGACTTGATGGCGCGAAACATCCAACGAGGACGA
GATCACGGCCTGCCAACGTACGGTAAATTCCGTCGCTGGTGTCGATTGAG
GCCGATCCGTACCTGGGACCAACTCAAAAAACACATGCCTGCCAAAGCTG
TTCACGCATTCAAAGAGTTGTACCCAACGCCCAGTGATATTGAACTTTTT
CCTGCTGGGATGGCAGAGAATCACCGTGGCCGAAGAATTGTTGGTCCCAC
TTTCGAATGTATTATTCGACGTCAGTTTAATCGTCTACAAAAAGGTGATC
GCTTCTATTATCGAGCCCGAGGTGTCTTCTCCAGAGCGCAACGTACGGCT
ATCTACAGAACTCGCTTATCCACTGTCCTCTGCAACAACCTCGAACGTGT
AGTATCCGTACAGAGACATGCTTTCTATGTAGCTGGTTCACGAAATAAGC
GAATCTCTTGCAACCGTATCCCTAAACTTGAATTATGGGCGTGGAAGGAA
AAACCTAAACACAAAGGCAAGAGAGATGAAATCTCATCTGACACTGTCTC
GAATAAGAAGGATGTTGCTTCTTCCGTGGAGATGGATATCGAAGAGGAGT
TACGTCAGCTTCACGCCAAGAGGGAGGCCACCCCAACCACCCCTACAACC
ACGACAGTAGTAGGTAGCGAGAGGCAGAAGAGTGGTTTCATTACGGACGA
GCCGTACAACATCGTAGATGAGGAAGAGGAAGCAATGATTGATAACATGG
TCGGGTTGACTGACATCGGTAGTGAGGTGGCTGACCCTGAAGTCGACCTA
GACTATGTAGACGGGGCGGAACACCCTACAACCACCCCTACAACTGGAGA
TGGAAACTCAATTGATGAATTTGAGGTGGAAGGAGAGATCCCAGAGGACG
ATTTGGCAGGATTAGACGAAGAGGGGTTTGAAACTGAGACTCATGCTAAA
AAGGACGAGCTCTGGTGA Coding sequence (CDS) from alignment at sc0000105_pilon:802126..804693- >XLOC_040554 ID=XLOC_040554|Name=XLOC_040554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3786bp|location=Sequence derived from alignment at sc0000105_pilon:802126..804693- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTTGACGTTAAGAAAGAGAACACAGGAAATAAACATTCCATTTC
AACAATTTTCATGACTTTCGGACAGTTTTTGGACCACGACATCACGGACA
CACCCAGTGAAGGCTGTCACGCCCAAACATGTTGTTTGACGTTAAGAAAG
AGAACACAGGAAATAAACATTCCATTTCAACAATTTTCATGACTTTCGGA
CAGTTTTTGGACCACGACATCACGGACACACCCAGTGAAGGCTGTCACGC
CCAAACGTGTGATCAAGTTGCATCCTTCAAATATCCTTGTTTCTCTATCT
TGTGGGACGAGAACAACTACTCCAAGTGCACTCCATTTGGAAGATCGCGC
GCCATCTGTAGACGGAGAAAGGGAACACGACAACAGGTCAATATTTTGAC
CTCCTTCGTAGATGGCTCACAAATTTATGGCGCAAAGAAAGAACTTTTCC
ACGATTTACGTAAAAATGATGGTGTGATCAAGTTGCATCCTTCAAATATC
CTTGTTTCTCTATCTTGTGGGACGAGAACAACTACTCCAAGTGCACTCCA
TTTGGAAGATCGCGCGCCATCTGTAGACGGAGAAAGGGAACACGACAACA
GGTCAATATTTTGACCTCCTTCGTAGATGGCTCACAAATTTATGGCGCAA
AGAAAGAACTTTTCCACGATTTACGTAAAAATGATGGATCAGGTCTCATG
AAACTAAAGGACAACTTGATGGAATTAGATCCAAAAATCAAACATTGCCA
CACACATGGTGGATGTTCATTGGTGGGTGACCACAGAGGTGATGAAAACA
TCGCCCTTCATTCAATGCACACCTTATGGGTTCGCGAACATAATCGTATT
GCGAAAGAACTCAAAGAGCTGAACCCTCACTGGGACGGAGAACGTGTGTT
CCAGGAAGCACGAAAAATCAATACAGCTGTTCTCCAACATATTGTTTTTA
AAGAATGGTTGCCAATGATCGTGCGACCTTTCCGATACAGAGGATACAGA
CCACGAGTCAATCCCAACATCATTAACTCATTTGCTACCGCAGCCTTCCG
TTTCGGACACAGTTTGATTCCAAACTCCTTTGAACTGTTAGACAAAAACT
TTGACCCCATCAACAAGCCAATCACACTTCAGCACGCCTTTTTCAACCGA
AAACCAATCAATCAGTACGGTATCGAACCGACCATGTTTGGGTTGCTAGG
TAACAAGTCTGAAGAAGTCGATACTGATTTTTCTTTCTCCATCGCACGTC
GTTTGTTTGTCGCTCCCGGCAAAGAAGACCATGTGGACTTGATGGCGCGA
AACATCCAACGAGGACGAGATCACGGCCTGCCAACGTACGGTAAATTCCG
TCGCTGGTGTCGATTGAGGCCGATCCGTACCTGGGACCAACTCAAAAAAC
ACATGCCTGCCAAAGCTGTTCACGCATTCAAAGAGTTGTACCCAACGCCC
AGTGATATTGAACTTTTTCCTGCTGGGATGGCAGAGAATCACCGTGGCCG
AAGAATTGTTGGTCCCACTTTCGAATGTATTATTCGACGTCAGTTTAATC
GTCTACAAAAAGGTGATCGCTTCTATTATCGAGCCCGAGGTGTCTTCTCC
AGAGCGCAACGTACGGCTATCTACAGAACTCGCTTATCCACTGTCCTCTG
CAACAACCTCGAACGTGTAGTATCCGTACAGAGACATGCTTTCTATGTAG
CTGGTTCACGAAATAAGCGAATCTCTTGCAACCGTATCCCTAAACTTGAA
TTATGGGCGTGGAAGGAAAAACCTAAACACAAAGGCAAGAGAGATGAAAT
CTCATCTGACACTGTCTCGAATAAGAAGGATGTTGCTTCTTCCGTGGAGA
TGGATATCGAAGAGGAGTTACGTCAGCTTCACGCCAAGAGGGAGGCCACC
CCAACCACCCCTACAACCACGACAGTAGTAGGTAGCGAGAGGCAGAAGAG
TGGTTTCATTACGGACGAGCCGTACAACATCGTAGATGAGGAAGAGGAAG
CAATGATTGATAACATGGTCGGGTTGACTGACATCGGTAGTGAGGTGGCT
GACCCTGAAGTCGACCTAGACTATGTAGACGGGGCGGAACACCCTACAAC
CACCCCTACAACTGGAGATGGAAACTCAATTGATGAATTTGAGGTGGAAG
GAGAGATCCCAGAGGACGATTTGGCAGGATTAGACGAAGAGGGGTTTGAA
ACTGAGACTCATGCTAAAAAGGACGAGCTCTGGTGAGATCAGGTCTCATG
AAACTAAAGGACAACTTGATGGAATTAGATCCAAAAATCAAACATTGCCA
CACACATGGTGGATGTTCATTGGTGGGTGACCACAGAGGTGATGAAAACA
TCGCCCTTCATTCAATGCACACCTTATGGGTTCGCGAACATAATCGTATT
GCGAAAGAACTCAAAGAGCTGAACCCTCACTGGGACGGAGAACGTGTGTT
CCAGGAAGCACGAAAAATCAATACAGCTGTTCTCCAACATATTGTTTTTA
AAGAATGGTTGCCAATGATCGTGCGACCTTTCCGATACAGAGGATACAGA
CCACGAGTCAATCCCAACATCATTAACTCATTTGCTACCGCAGCCTTCCG
TTTCGGACACAGTTTGATTCCAAACTCCTTTGAACTGTTAGACAAAAACT
TTGACCCCATCAACAAGCCAATCACACTTCAGCACGCCTTTTTCAACCGA
AAACCAATCAATCAGTACGGTATCGAACCGACCATGTTTGGGTTGCTAGG
TAACAAGTCTGAAGAAGTCGATACTGATTTTTCTTTCTCCATCGCACGTC
GTTTGTTTGTCGCTCCCGGCAAAGAAGACCATGTGGACTTGATGGCGCGA
AACATCCAACGAGGACGAGATCACGGCCTGCCAACGTACGGTAAATTCCG
TCGCTGGTGTCGATTGAGGCCGATCCGTACCTGGGACCAACTCAAAAAAC
ACATGCCTGCCAAAGCTGTTCACGCATTCAAAGAGTTGTACCCAACGCCC
AGTGATATTGAACTTTTTCCTGCTGGGATGGCAGAGAATCACCGTGGCCG
AAGAATTGTTGGTCCCACTTTCGAATGTATTATTCGACGTCAGTTTAATC
GTCTACAAAAAGGTGATCGCTTCTATTATCGAGCCCGAGGTGTCTTCTCC
AGAGCGCAACGTACGGCTATCTACAGAACTCGCTTATCCACTGTCCTCTG
CAACAACCTCGAACGTGTAGTATCCGTACAGAGACATGCTTTCTATGTAG
CTGGTTCACGAAATAAGCGAATCTCTTGCAACCGTATCCCTAAACTTGAA
TTATGGGCGTGGAAGGAAAAACCTAAACACAAAGGCAAGAGAGATGAAAT
CTCATCTGACACTGTCTCGAATAAGAAGGATGTTGCTTCTTCCGTGGAGA
TGGATATCGAAGAGGAGTTACGTCAGCTTCACGCCAAGAGGGAGGCCACC
CCAACCACCCCTACAACCACGACAGTAGTAGGTAGCGAGAGGCAGAAGAG
TGGTTTCATTACGGACGAGCCGTACAACATCGTAGATGAGGAAGAGGAAG
CAATGATTGATAACATGGTCGGGTTGACTGACATCGGTAGTGAGGTGGCT
GACCCTGAAGTCGACCTAGACTATGTAGACGGGGCGGAACACCCTACAAC
CACCCCTACAACTGGAGATGGAAACTCAATTGATGAATTTGAGGTGGAAG
GAGAGATCCCAGAGGACGATTTGGCAGGATTAGACGAAGAGGGGTTTGAA
ACTGAGACTCATGCTAAAAAGGACGAGCTCTGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:802126..804693 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 346-1893:1549 |
| Aaloc | 130-342:2186 |
| Aaloc | 1-126:2569 |
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