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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000131_pilon:295599..298666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040545 ID=XLOC_040545|Name=XLOC_040545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3068bp|location=Sequence derived from alignment at sc0000131_pilon:295599..298666- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGCAATGGGGAACATATTGGAGTAAATATTTTTAGAATTTTATT
TTTACAACTTGTCTGAAAAAACCTTTGCCTAAAGGGTACATTAACTTCTT
TTATAACCAATCCGAGCAATTTTCAATAGATTTTGCTTTTGAAAAGGTTT
GAAAGCCGAATTTGATTTTAAAACCAAGGAGTATCGATAATTTTCTGTGT
ATTCTTTTAGCTTTATTAACGAAGCAAAAAAGCTTTGTTTGCTATATGTA
TTCGGTATGTAATATAGCGGTTAGTGTAAAACACAGGTCACAGGTCACAG
GTCAGTGTTGACAGGTCAGCTTCAATTACTGTAAAACACAAATAAAATGT
TTGAAAAACAGTTGTTAATGTCAAAAATATAATTCCAAAGGTATTTTATC
GATCTAAAACTATTTTAAAGCTTAAAATCTACCCACGTGCTTACCACGTG
ATTTCGCGTTTTATGCCGTGTATAACACAGACCTTTTCAATGTTATATGC
ATGTTACGTATGTTATATACAAAGAATACGTATTAAAGAAATATTGATAT
CGCCTTTTGTGTCATTTGTTGTCAATATTTGGGGTTGATGATTTGTCATT
TAAGTCTTCTAAATAACATATTTTGATATTACATTTCCATTACATATAAT
ATTTTCAGGAACTTATGTTATGAGTTGTATGTTACGAGTGCGTTACAGTT
TTCCGGTCTGTCATTTGTATGACCTATGTGACCCGTGACCTGTGACCTGT
GTTTTACACTAACCGGTATATATAGCTGTTTTCCATTTTATTCTTTTGTT
TGATTTATTATAGAACGTAATCGGTGAGCTACGATTGATCAATGACATGA
GGGGAGAGATTGTCAGATTGACAAGAGAAAGAGATGTGAGATAATTTTTT
TCCATTAACCCCGTTACTAAAGTACATGGTCAAAAATTCTATTATATGGA
AAATCCGTTCACTTTTGGTGCTTGCAAATTTTTATTTTGCTTACCACTTG
CATCACTTACTTTTTATTTTTTACTGATGAACTTGAACGCTATCAGATTC
GTAAAAAAGCGAACTAAGGGACTATTTCATTTTTCTCTTCCTGTAGGACG
AGCGTGCACAGAGGATGGCGGCGGAACAAGCAGCCGATAATTTTCACCAC
GCAAATTTGGTAAGAGCATAGTCCGTATAAGAAACAAGACCCTTCCAGAC
CCTTTTGTTTCTTTCTATTGTTGCGAACTTGGACTTGCGTTGAGAAATCA
TTTTGTTTTGCTCACTTTTTGATCATGTGATTAACTTTTGAAGCAATCCC
AAGAGGCGTATTTGGTAACGTGATCAAAAACTTAGCAAATTGATTTTTAT
ATTATTATTAACAAAGGAAAAAGTAAACAAAAAGTGTTACAACACAAGGC
TTCCAGACCAGGGTTTTTTATACGAAGTATGGTAAGAAAAAGTATTAGTT
CTCAAGATACGGGCAAGACACGCTACAAAAGCACAAAGAACTTTAATGCA
GTTTTTGTTTTGTATTTTTTGAGACCACCTACCTTGTTAAGACCAGTGTT
GTTATAAGGGTTCCGTGACGTCACAGTGTTTGATACAGCTCGGCTCAGGC
CAGTATAACCTGAAACGAGAGGTTTGTCAGGGACAGTACGCATGAATCTA
TCAAGTTGACAAACGAAGACATCCTTATTGCAATAAGGATACACACAAAA
GAACCCCAGCGTGGTAGATTCTACCACGGCCCTAAGGCTAATAGGGTGAA
GCATAAATGAGCCTGTTTTCTAAAAAAATATGCTCATAAAAAACATGTAA
TCAAAGTTCTCAATGATTTTCTTTCAGGTGTACCCGTACACCAAATTTAA
TTTGCCATGTGCTGCGAGAGGGCCAGACAATCCTCACAGGTTGATATTTA
GAGGTAAGTGCAATTATTTTTTATCTAACCCTTTAACAACCAGGTTAACA
GGCTTCTTTTACCTCCAGCCCCGCCCTAATTAAGAGATGTGGAGCATGTA
GGTAAGATGAACATTATCTATGATCTATCAAATTTTGTGCCCTTTTTCAC
TTTGGGCTTCGACAACGAAAGGAGACTTTTATCTATTTAAGGGCTCTGAC
CATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCTGACTGA
TGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGACAAACTA
TTCCTGAATCTGAAAATTTAAAAATTGCATTGAAAAAATTTGATGAAGAA
GAAAATGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGAAGAGCTTAG
TTTCGGCGAAGAAAAAACATTTTGAAAATTTTTTCGCAGTAGATGGTGTA
TCTTTTACCGAACAGTAAAAATTTTTGCGGAAAATTTTTGTAAATGCTTC
TTTGTCTCGAAATCTTCAAAATAGTCGTTTTTCATCAATTTTTCACCTGG
ATTTTGCTTAAAAAAACAGTCATAACTTTTGACACATCTTTTTAGAAAAA
TTTTCCGCAAAATTTAAAATAGTTCAATTCTTTGCGGACAGGGTAAAGAA
ATTTTGAAACAAAAAAGTTAATTACCCATTAAAACTTAGCACTTTTTGTA
AAAGATGGTGATGCAACATATTATTAACGTCTTTTTAAAGTTCATAACGT
CATTTTTGCAATTAAATTCTTAATTACTCTTAAGGGATTCGATTAAAAAG
CAATTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATAC
AACTTTTTTGTTAAAATACCAAAATCAATTTTTGGACTATGGTCAGAGCC
CTTAACCAAAAACAAAATACAATTCCGGGACAATTTCTTTCAGGCGGATT
AAAATGTGGCTATTTCATACAGAGTGGTGACTTTTCCTTCCTATGAGCGT
TTCACACATACTAGGTTTAATTCAACTTATCTGGAAATATACTTTCTTTT
TAAATATTTTACAGTAAATCAGTACACAAGTTTATGTTTTCCGTTTTTAG
GCTTTGTCGATGAAAGGACAATTATTGACGCGGAGCATATTCTCCAAGCA
GAAACAGTAAACGTTCCA Coding sequence (CDS) from alignment at sc0000131_pilon:295599..298666- >XLOC_040545 ID=XLOC_040545|Name=XLOC_040545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000131_pilon:295599..298666- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGGCAATGGGGAACATATTGGAATGGCTGGCAATGGGGAACATAT
TGGAAACGTAATCGGTGAGCTACGATTGATCAATGACATGAGGGGAGAGA
TTGTCAGATTGACAAGAGAAAGAGATAACGTAATCGGTGAGCTACGATTG
ATCAATGACATGAGGGGAGAGATTGTCAGATTGACAAGAGAAAGAGATGA
CGAGCGTGCACAGAGGATGGCGGCGGAACAAGCAGCCGATAATTTTCACC
ACGCAAATTTGGACGAGCGTGCACAGAGGATGGCGGCGGAACAAGCAGCC
GATAATTTTCACCACGCAAATTTGGTGTACCCGTACACCAAATTTAATTT
GCCATGTGCTGCGAGAGGGCCAGACAATCCTCACAGGTTGATATTTAGAG
GTGTACCCGTACACCAAATTTAATTTGCCATGTGCTGCGAGAGGGCCAGA
CAATCCTCACAGGTTGATATTTAGAGGCTTTGTCGATGAAAGGACAATTA
TTGACGCGGAGCATATTCTCCAAGCAGAAACAGTAAACGTTCCAGCTTTG
TCGATGAAAGGACAATTATTGACGCGGAGCATATTCTCCAAGCAGAAACA
GTAAACGTTCCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131_pilon | genome | sc0000131_pilon:295599..298666 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 241-306:67 |
| Aaloc | 163-237:1242 |
| Aaloc | 100-162:1973 |
| Aaloc | 28-99:2256 |
| Aaloc | 1-27:3069 |
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