XLOC_040501 (mRNA) -

Overview
NameXLOC_040501
Unique NameXLOC_040501
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000181_pilon:434615..435166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040501 ID=XLOC_040501|Name=XLOC_040501|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=552bp|location=Sequence derived from alignment at sc0000181_pilon:434615..435166- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGATATCAATACTACTATCACTACCACATCTTTGACCACAACAACACG TATCAGTACAACCCAAGCTGGAACCACTATCCAGACAACAACTTTAGAAA CGTCTACGACAACCATTATCTCCACAACAGCTATATCAACTACTATAACA CTCATTAAGAGCGAAATCAAAACAACCACAACAACAACTGCTCAATCAAC CACGACAACAACCACAAGTACAACAACAACTTCATCCACAACAACTACAA CTACAACTCCGAAACCTACAACCACCACAATAACAACGACAACAACCACC TTACCAACCACAACTACCACTACAACCACACCACCGCCTACCACTTCTAC AACCACGACAACCACACCGCCGCCTACCACTTCTACAACCACGACAACCA CACCACCGTCTACCACTACTACAACCACGACAACCACACCACCGCCTACT ACTACTACAACCACGACAACCACCCCACCGCCTTCCACCACTACAACAAC TACTGGACCTACAACAACGACAGTAGACCTTGGACCTGACACACCGTACC CT

Coding sequence (CDS) from alignment at sc0000181_pilon:434615..435166-

>XLOC_040501 ID=XLOC_040501|Name=XLOC_040501|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000181_pilon:434615..435166- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGATATCAATACTACTATCACTACCACATCTTTGACCACAACAACACG
TATCAGTACAACCCAAGCTGGAACCACTATCCAGACAACAACTTTAGAAA
CGTCTACGACAACCATTATCTCCACAACAGCTATATCAACTACTATAACA
CTCATTAAGAGCGAAATCAAAACAACCACAACAACAACTGCTCAATCAAC
CACGACAACAACCACAAGTACAACAACAACTTCATCCACAACAACTACAA
CTACAACTCCGAAACCTACAACCACCACAATAACAACGACAACAACCACC
TTACCAACCACAAAGTGATATCAATACTACTATCACTACCACATCTTTGA
CCACAACAACACGTATCAGTACAACCCAAGCTGGAACCACTATCCAGACA
ACAACTTTAGAAACGTCTACGACAACCATTATCTCCACAACAGCTATATC
AACTACTATAACACTCATTAAGAGCGAAATCAAAACAACCACAACAACAA
CTGCTCAATCAACCACGACAACAACCACAAGTACAACAACAACTTCATCC
ACAACAACTACAACTACAACTCCGAAACCTACAACCACCACAATAACAAC
GACAACAACCACCTTACCAACCACAACAACCACGACAACCACACCACCGC
CTACTACTACTACAACCACGACAACCACCCCACCGCCTTCCACCACTACA
ACAACTACTGGACCTACAACAACGACAGTAGACCTTGGACCTGACACACC
GTACCCTCAACCACGACAACCACACCACCGCCTACTACTACTACAACCAC
GACAACCACCCCACCGCCTTCCACCACTACAACAACTACTGGACCTACAA
CAACGACAGTAGACCTTGGACCTGACACACCGTACCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040501XLOC_040501-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000181_pilongenomesc0000181_pilon:434615..435166 -
Properties
Property NameValue
Aaloc316-444:130
Aaloc1-312:553