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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000125_pilon:79103..80971- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040488 ID=XLOC_040488|Name=XLOC_040488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1869bp|location=Sequence derived from alignment at sc0000125_pilon:79103..80971- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAAAGCCCAATGTATCCAACTTTGGAAGACGTCTTCACAAATGGAAT
CAACGATAACATCAATTGGATCAGGATTCAAAAACCATTCGAATTTGATT
CACAACAATTTCAGCTTGGTAAACTTCTCTACGTTCCAAACAAAGCATTC
ACGAAACGACGTGATTCCCTGACTTGTTATGGTTTTCCTGATGGGAATCT
CCATTTGTTACCTTACAACATCGAAGGGGATTTCTTGAGTTGCGAAAAGA
ATGGTGAGGTGGCAGGGAATCTATTTACATTGGCTATTGACGAACATAAC
AACGTTGATGTTCAAATATCCGTCACCGACAAAAACGCAAACAATAATGA
CGTCGTTAAAGGACTAAATGACGTCACTTTGATGGAAGAAGTTGGCGACT
TCTTCCGAAAATCGTCCTCGTCATCTTATGAGAAAAACGTCGAAAATCTT
TTAAACAGCGATGAACATTCAAACAATGTGAGTACTAACAAATACAGCCC
AAAGCTTATTCTTAGAAACTCATACCCAGGAAACTCAAAGAGACGAAACG
CCCCTGCTTATGAGAATGTCACACTAACAACAGCTAATAACGAGGATGGG
CGGACTCCAACCAAACCAATACCACGCCCAATCAAAACAGTAGGGAGTAT
TACAACAAATGCATTTGACCAAATTGATGCATTGATGGAGCAGGGTCGCG
ATAATGCAGCTGAGCTGTCAAAAAATCATCAAAATATTCACCCAATCCCA
ATGAATAATGATAAAACCAAATCTCTGCCAGCTACTATCCATAATGGTAC
CTTAGCTATAAAGCCGGAATCTTGCGAAAGAGATCACAAAGTTCTAACAC
TGAATAACGAGAAAACATTTACTTCTTATTTCAAAAAGACAGATACTCAC
GTTACAACCAAACATCCAAAATTCAATAGAACGCCTTCAAAACAATTTGA
TAAACGATTTAGTATTTACGGCGACCGAGATTATGTTCAAATTTCTATGG
AAACGTTTGAAAAGCGTGCAACATTACACCATCAAAACAGTATGAATTTA
ACTCAAGAAGACTATGAAGATATGACTCATCCGGAGGTCGTAATCCCGCA
GTTTTTCCAACCGGAAGAAATGTTCACGGTCAAATTACGGACACGAGCTA
AAAGTGCGACTCTGATACGGAAAAAGACGAAATCACCAAGTCTAAAGGCT
AAAACCAAGGAACGTTTGTCAAAGTCGAAAAGCATAGCTGACTTGGATGG
AGATTTTTCTACAGAAGAGTTGAAATCATTATCGGATATAAACCCTCGAA
AAAATAAAGAAATGTCTTCGAAAATGAAGAAATCGAAAAAGCAGGAGGGT
GGTGATCAAAAGAGAAGGACTACAGGTAAAACTATTACGCCTTATGAACG
CCTTATGGTGGAGGTAGCAAATTTTGAAGATGATGAGGAAAACTTTGATC
TGGAGGAATGGGACGAGTGTAGGCTATCAAGACGAAAAGGTTTTAATCGG
TTCGAAAGTCGGTTGGTCTATCACACTATACACGGTTGGCAACCAAGACA
AAACGAAAATGACGTGGGTGCTAAATTAACGTTTGCCGAAGATTACTCTA
CCCAGGGATTACACGTATTTTTAAAAGATGCCCTGGGTAATGAAAGTCTT
GCGAAATATATGAAAGATTATCATGTTGATGGATATTTAATGAAATATAT
TGTTATGGATGACTTGATATTGGACGATCAAATGTTCGACCAATCATTCT
TGACTATCGAAGAACTGAAAAGGTTACGATCAGCTTTTTATCCTAACCGA
TTGAGATGCTTTGCAATGGATTCAGATACAGCACAGGAACTGAAAAGTAA
AACTGTGCAACGATTATGA Coding sequence (CDS) from alignment at sc0000125_pilon:79103..80971- >XLOC_040488 ID=XLOC_040488|Name=XLOC_040488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3738bp|location=Sequence derived from alignment at sc0000125_pilon:79103..80971- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAAAGCCCAATGTATCCAACTTTGGAAGACGTCTTCACAAATGGAAT
CAACGATAACATCAATTGGATCAGGATTCAAAAACCATTCGAATTTGATT
CACAACAATTTCAGCTTGGTAAACTTCTCTACGTTCCAAACAAAGCATTC
ACGAAACGACGTGATTCCCTGACTTGTTATGGTTTTCCTGATGGGAATCT
CCATTTGTTACCTTACAACATCGAAGGGGATTTCTTGAGTTGCGAAAAGA
ATGGTGAGGTGGCAGGGAATCTATTTACATTGGCTATTGACGAACATAAC
AACGTTGATGTTCAAATATCCGTCACCGACAAAAACGCAAACAATAATGA
CGTCGTTAAAGGACTAAATGACGTCACTTTGATGGAAGAAGTTGGCGACT
TCTTCCGAAAATCGTCCTCGTCATCTTATGAGAAAAACGTCGAAAATCTT
TTAAACAGCGATGAACATTCAAACAATGTGAGTACTAACAAATACAGCCC
AAAGCTTATTCTTAGAAACTCATACCCAGGAAACTCAAAGAGACGAAACG
CCCCTGCTTATGAGAATGTCACACTAACAACAGCTAATAACGAGGATGGG
CGGACTCCAACCAAACCAATACCACGCCCAATCAAAACAGTAGGGAGTAT
TACAACAAATGCATTTGACCAAATTGATGCATTGATGGAGCAGGGTCGCG
ATAATGCAGCTGAGCTGTCAAAAAATCATCAAAATATTCACCCAATCCCA
ATGAATAATGATAAAACCAAATCTCTGCCAGCTACTATCCATAATGGTAC
CTTAGCTATAAAGCCGGAATCTTGCGAAAGAGATCACAAAGTTCTAACAC
TGAATAACGAGAAAACATTTACTTCTTATTTCAAAAAGACAGATACTCAC
GTTACAACCAAACATCCAAAATTCAATAGAACGCCTTCAAAACAATTTGA
TAAACGATTTAGTATTTACGGCGACCGAGATTATGTTCAAATTTCTATGG
AAACGTTTGAAAAGCGTGCAACATTACACCATCAAAACAGTATGAATTTA
ACTCAAGAAGACTATGAAGATATGACTCATCCGGAGGTCGTAATCCCGCA
GTTTTTCCAACCGGAAGAAATGTTCACGGTCAAATTACGGACACGAGCTA
AAAGTGCGACTCTGATACGGAAAAAGACGAAATCACCAAGTCTAAAGGCT
AAAACCAAGGAACGTTTGTCAAAGTCGAAAAGCATAGCTGACTTGGATGG
AGATTTTTCTACAGAAGAGTTGAAATCATTATCGGATATAAACCCTCGAA
AAAATAAAGAAATGTCTTCGAAAATGAAGAAATCGAAAAAGCAGGAGGGT
GGTGATCAAAAGAGAAGGACTACAGGTAAAACTATTACGCCTTATGAACG
CCTTATGGTGGAGGTAGCAAATTTTGAAGATGATGAGGAAAACTTTGATC
TGGAGGAATGGGACGAGTGTAGGCTATCAAGACGAAAAGGTTTTAATCGG
TTCGAAAGTCGGTTGGTCTATCACACTATACACGGTTGGCAACCAAGACA
AAACGAAAATGACGTGGGTGCTAAATTAACGTTTGCCGAAGATTACTCTA
CCCAGGGATTACACGTATTTTTAAAAGATGCCCTGGGTAATGAAAGTCTT
GCGAAATATATGAAAGATTATCATGTTGATGGATATTTAATGAAATATAT
TGTTATGGATGACTTGATATTGGACGATCAAATGTTCGACCAATCATTCT
TGACTATCGAAGAACTGAAAAGGTTACGATCAGCTTTTTATCCTAACCGA
TTGAGATGCTTTGCAATGGATTCAGATACAGCACAGGAACTGAAAAGTAA
AACTGTGCAACGATTATGATTAGAAAGCCCAATGTATCCAACTTTGGAAG
ACGTCTTCACAAATGGAATCAACGATAACATCAATTGGATCAGGATTCAA
AAACCATTCGAATTTGATTCACAACAATTTCAGCTTGGTAAACTTCTCTA
CGTTCCAAACAAAGCATTCACGAAACGACGTGATTCCCTGACTTGTTATG
GTTTTCCTGATGGGAATCTCCATTTGTTACCTTACAACATCGAAGGGGAT
TTCTTGAGTTGCGAAAAGAATGGTGAGGTGGCAGGGAATCTATTTACATT
GGCTATTGACGAACATAACAACGTTGATGTTCAAATATCCGTCACCGACA
AAAACGCAAACAATAATGACGTCGTTAAAGGACTAAATGACGTCACTTTG
ATGGAAGAAGTTGGCGACTTCTTCCGAAAATCGTCCTCGTCATCTTATGA
GAAAAACGTCGAAAATCTTTTAAACAGCGATGAACATTCAAACAATGTGA
GTACTAACAAATACAGCCCAAAGCTTATTCTTAGAAACTCATACCCAGGA
AACTCAAAGAGACGAAACGCCCCTGCTTATGAGAATGTCACACTAACAAC
AGCTAATAACGAGGATGGGCGGACTCCAACCAAACCAATACCACGCCCAA
TCAAAACAGTAGGGAGTATTACAACAAATGCATTTGACCAAATTGATGCA
TTGATGGAGCAGGGTCGCGATAATGCAGCTGAGCTGTCAAAAAATCATCA
AAATATTCACCCAATCCCAATGAATAATGATAAAACCAAATCTCTGCCAG
CTACTATCCATAATGGTACCTTAGCTATAAAGCCGGAATCTTGCGAAAGA
GATCACAAAGTTCTAACACTGAATAACGAGAAAACATTTACTTCTTATTT
CAAAAAGACAGATACTCACGTTACAACCAAACATCCAAAATTCAATAGAA
CGCCTTCAAAACAATTTGATAAACGATTTAGTATTTACGGCGACCGAGAT
TATGTTCAAATTTCTATGGAAACGTTTGAAAAGCGTGCAACATTACACCA
TCAAAACAGTATGAATTTAACTCAAGAAGACTATGAAGATATGACTCATC
CGGAGGTCGTAATCCCGCAGTTTTTCCAACCGGAAGAAATGTTCACGGTC
AAATTACGGACACGAGCTAAAAGTGCGACTCTGATACGGAAAAAGACGAA
ATCACCAAGTCTAAAGGCTAAAACCAAGGAACGTTTGTCAAAGTCGAAAA
GCATAGCTGACTTGGATGGAGATTTTTCTACAGAAGAGTTGAAATCATTA
TCGGATATAAACCCTCGAAAAAATAAAGAAATGTCTTCGAAAATGAAGAA
ATCGAAAAAGCAGGAGGGTGGTGATCAAAAGAGAAGGACTACAGGTAAAA
CTATTACGCCTTATGAACGCCTTATGGTGGAGGTAGCAAATTTTGAAGAT
GATGAGGAAAACTTTGATCTGGAGGAATGGGACGAGTGTAGGCTATCAAG
ACGAAAAGGTTTTAATCGGTTCGAAAGTCGGTTGGTCTATCACACTATAC
ACGGTTGGCAACCAAGACAAAACGAAAATGACGTGGGTGCTAAATTAACG
TTTGCCGAAGATTACTCTACCCAGGGATTACACGTATTTTTAAAAGATGC
CCTGGGTAATGAAAGTCTTGCGAAATATATGAAAGATTATCATGTTGATG
GATATTTAATGAAATATATTGTTATGGATGACTTGATATTGGACGATCAA
ATGTTCGACCAATCATTCTTGACTATCGAAGAACTGAAAAGGTTACGATC
AGCTTTTTATCCTAACCGATTGAGATGCTTTGCAATGGATTCAGATACAG
CACAGGAACTGAAAAGTAAAACTGTGCAACGATTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000125_pilon | genome | sc0000125_pilon:79103..80971 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1869:1870 |
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