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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000217_pilon:463702..465566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040487 ID=XLOC_040487|Name=XLOC_040487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1865bp|location=Sequence derived from alignment at sc0000217_pilon:463702..465566- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGATGATGATGTTGCTGCTCTCGTCGTAGACAATGGATCTGGTAT
GTGCAAAGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTGTCTTCCCCT
CCATCGTTGGACGTCCTCGTCATCAAGGTGTCATGGTTGGTATGGGACAA
AAAGACTCGTATGTTGGAGATGAAGCCCAATCCAAAAGAGGTATCCTCAC
CTTGAAATACCCCATTGAGCACGGAATCGTCACCAACTGGGATGATATGG
AAAAGGTGAGGGCAGTTTGTTGCTTCGCATTATTTTATCATTGCATTAGC
ATAAACAAATATTTATAGCCCATATTTTTAAATCTGTGAACTAGGAACAG
CCCAAGGGACTTTTTTTCAAACATTTTCTCTTCTACTGGTTCTTGTCCAG
GAAATGAGTTTTGTGACAAATTTTACGCTGAGAAAAGCTTTTGCTGGGAT
AGTATTAAGATAGTGAAAAAGATTAAAGTGGGGGTATTATTAAATACTAT
GTATGATAATTGTGGTTTTTTTTTGTTTATTGGTACCTATAAAACTTTCA
GATCCATTTAATAGTCGAGGGGAAATGGTGGTATTTTAAAGGTTGAATAT
CACAATTGCTAGTATTAGATGTTTAAGTTCTTCAGCCAGTTCCCTCTACT
ATTCGGGACCTCAGTAAGTTTGGGAAATCTTTCTAAATGTGCGCTTTAAC
TGTCGCATGCGAAACATTTCAATTAATGCAGATCGTTATAGGCTATGTAT
AGTCACACGCTTAATTTCAGCCATGCTGGGAGAAACTTAGTTTCAGTAGC
TAGGCTCAGTTTTTCTTTGAACTGGAAAAGCTGTGGGCAAATGGGAAATA
ACACCCTTTCGCATTGTATTCTACATTAAATTTTTGCGTAAAGCAGTCCT
TGCGTTTTGAACTTCTTTCTGGGAAAATCAGAAATAGTTGTAGTTCATCA
ATTAGAAACTATTTAATTTCTACTTTTTCCTCTACCTAGATCTGGCATCA
CACTTTCTACAATGAACTACGTGTTGCACCAGAAGAACACCCTGTTCTCC
TTACTGAAGCTCCATTGAATCCAAAAGCTAACAGAGAAAAGATGACCCAG
ATCATGTTCGAAACCTTCAACTCTCCAGCCATGTATGTTGCCATTCAAGC
TGTATTGTCATTGTATGCTTCTGGACGTACCACTGGTATTGTTTTGGATT
CTGGAGATGGTGTTTCTCACACAGTCCCAATCTATGAAGGTTACGCTCTT
CCCCACGCCATCATCCGTCTTGATTTGGCTGGTCGTGATTTGACCGACTA
CTTGATGAAAATCTTGACCGAACGTGGATACTCCTTCACCACCACTGCTG
AACGTGAAATTGTCCGTGACATCAAAGAGAAATTGTGCTATGTTGCCTTA
GATTTCGAACAAGAAATGCAAACTGCTGCCTCAAGCTCTAGCTTGGAGAA
ATCATACGAATTGCCTGATGGACAAGTCATTACCATTGGAAACGAACGAT
TCCGATGCCCAGAAACCCTCTTCCAACCTGCCTTCATTGGTATGGAATCT
GCAGGTATCCATGAAACAACTTACAACTCCATCATGAAATGTGATGTTGA
TATTCGTAAAGACTTATATGCTAACACTGTATTATCTGGTGGTACGACTA
TGTTCCCAGGTATTGCTGACCGTATGCAAAAGGAAATCTCTGCCCTCGCT
CCACCAACCATGAAAATCAAGATCATTGCTCCACCAGAAAGAAAATACTC
TGTCTGGATTGGAGGATCCATCTTGGCCTCGCTCTCCACTTTCCAACAGA
TGTGGATCTCCAAACAAGAATATGACGAATCTGGTCCATCAATTGTCCAC
AGAAAATGCTTCTAA Coding sequence (CDS) from alignment at sc0000217_pilon:463702..465566- >XLOC_040487 ID=XLOC_040487|Name=XLOC_040487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000217_pilon:463702..465566- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGATGATGATGTTGCTGCTCTCGTCGTAGACAATGGATCTGGTAT
GTGCAAAGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTGTCTTCCCCT
CCATCGTTGGACGTCCTCGTCATCAAGGTGTCATGGTTGGTATGGGACAA
AAAGACTCGTATGTTGGAGATGAAGCCCAATCCAAAAGAGGTATCCTCAC
CTTGAAATACCCCATTGAGCACGGAATCGTCACCAACTGGGATGATATGG
AAAAGATGGCCGATGATGATGTTGCTGCTCTCGTCGTAGACAATGGATCT
GGTATGTGCAAAGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTGTCTT
CCCCTCCATCGTTGGACGTCCTCGTCATCAAGGTGTCATGGTTGGTATGG
GACAAAAAGACTCGTATGTTGGAGATGAAGCCCAATCCAAAAGAGGTATC
CTCACCTTGAAATACCCCATTGAGCACGGAATCGTCACCAACTGGGATGA
TATGGAAAAGATCTGGCATCACACTTTCTACAATGAACTACGTGTTGCAC
CAGAAGAACACCCTGTTCTCCTTACTGAAGCTCCATTGAATCCAAAAGCT
AACAGAGAAAAGATGACCCAGATCATGTTCGAAACCTTCAACTCTCCAGC
CATGTATGTTGCCATTCAAGCTGTATTGTCATTGTATGCTTCTGGACGTA
CCACTGGTATTGTTTTGGATTCTGGAGATGGTGTTTCTCACACAGTCCCA
ATCTATGAAGGTTACGCTCTTCCCCACGCCATCATCCGTCTTGATTTGGC
TGGTCGTGATTTGACCGACTACTTGATGAAAATCTTGACCGAACGTGGAT
ACTCCTTCACCACCACTGCTGAACGTGAAATTGTCCGTGACATCAAAGAG
AAATTGTGCTATGTTGCCTTAGATTTCGAACAAGAAATGCAAACTGCTGC
CTCAAGCTCTAGCTTGGAGAAATCATACGAATTGCCTGATGGACAAGTCA
TTACCATTGGAAACGAACGATTCCGATGCCCAGAAACCCTCTTCCAACCT
GCCTTCATTGGTATGGAATCTGCAGGTATCCATGAAACAACTTACAACTC
CATCATGAAATGTGATGTTGATATTCGTAAAGACTTATATGCTAACACTG
TATTATCTGGTGGTACGACTATGTTCCCAGGTATTGCTGACCGTATGCAA
AAGGAAATCTCTGCCCTCGCTCCACCAACCATGAAAATCAAGATCATTGC
TCCACCAGAAAGAAAATACTCTGTCTGGATTGGAGGATCCATCTTGGCCT
CGCTCTCCACTTTCCAACAGATGTGGATCTCCAAACAAGAATATGACGAA
TCTGGTCCATCAATTGTCCACAGAAAATGCTTCTAAATCTGGCATCACAC
TTTCTACAATGAACTACGTGTTGCACCAGAAGAACACCCTGTTCTCCTTA
CTGAAGCTCCATTGAATCCAAAAGCTAACAGAGAAAAGATGACCCAGATC
ATGTTCGAAACCTTCAACTCTCCAGCCATGTATGTTGCCATTCAAGCTGT
ATTGTCATTGTATGCTTCTGGACGTACCACTGGTATTGTTTTGGATTCTG
GAGATGGTGTTTCTCACACAGTCCCAATCTATGAAGGTTACGCTCTTCCC
CACGCCATCATCCGTCTTGATTTGGCTGGTCGTGATTTGACCGACTACTT
GATGAAAATCTTGACCGAACGTGGATACTCCTTCACCACCACTGCTGAAC
GTGAAATTGTCCGTGACATCAAAGAGAAATTGTGCTATGTTGCCTTAGAT
TTCGAACAAGAAATGCAAACTGCTGCCTCAAGCTCTAGCTTGGAGAAATC
ATACGAATTGCCTGATGGACAAGTCATTACCATTGGAAACGAACGATTCC
GATGCCCAGAAACCCTCTTCCAACCTGCCTTCATTGGTATGGAATCTGCA
GGTATCCATGAAACAACTTACAACTCCATCATGAAATGTGATGTTGATAT
TCGTAAAGACTTATATGCTAACACTGTATTATCTGGTGGTACGACTATGT
TCCCAGGTATTGCTGACCGTATGCAAAAGGAAATCTCTGCCCTCGCTCCA
CCAACCATGAAAATCAAGATCATTGCTCCACCAGAAAGAAAATACTCTGT
CTGGATTGGAGGATCCATCTTGGCCTCGCTCTCCACTTTCCAACAGATGT
GGATCTCCAAACAAGAATATGACGAATCTGGTCCATCAATTGTCCACAGA
AAATGCTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217_pilon | genome | sc0000217_pilon:463702..465566 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 256-1131:877 |
| Aaloc | 1-255:1866 |
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