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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000044_pilon:434334..437543- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040485 ID=XLOC_040485|Name=XLOC_040485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3210bp|location=Sequence derived from alignment at sc0000044_pilon:434334..437543- (Clytia hemisphaerica_ch_hm2_pilon)
TATATTTCAATCAACAGAAAAATGGTACCCCAACCCCATAAGATTACACG
AAAGCGTATTGCTATCATAGGCTGTGGACCAAGTGGAATGTCTATGTTGA
TAACTTTAGTGAAAGCAAAACAAAATGGTGATCAGATTCCTGATATTGTA
TGTTTTGAGAAGCAATCTATAATGGGTGGACAATGGGTGTATGAATGGCA
GACGGGCGTTGATGAATTTGGAACGCCCGTTTATAATTGTATGTACGAAG
CTTTGAGATTGAATAATGCAAAAGAAGCCCAAGAATACCAGGTATTCCGT
TCAACATCCTATCCAGTCCCTTAGTCCATAAGAAAAGCATGGCAGTTAGA
AATAGTTTTCAATTGATCTGTAAAAACAACCAATGTCAATTGAATACGAT
TTCGGCTGCAAATTCCGGTAACTGTCATTTTTAAATAGCGAACCATTATG
TTAACATCTTTATCGTGGTCGGTCTTTCTTAATAAATCTAACATAAAAAT
TAAAAGAGTATATCCTAGTAAGTGCGAGCGCAAACGCAAACCAATTCAGG
AAATCAAACCGGAAAGATCGGGAAATCTAGCCCGACTATCGCGATTGATC
GGATTTACGCACAATTACAAATGAAAAACACTGATTTTAAGAAACTTCTT
AACCGGAGTTTAATAATCCCTAATTTATTATTTTCTCTTTTATTTTACAT
ATTCAGGCTTACAAATGTTATATTTCTTATGTTATATTTCTGCAGGATTA
CACTTTTGACGAGCACTTCAAAAAACCGATATCATCCTACCCTCCAAGAC
ATTTGATTCACGACTACATCCTTGGTCGAGCTAGAAAATACGATATCAAA
CGATTCGTGAAATTTTCAACATTTGTAAAGCAAGTGGTCAAAAATGAAAA
TGGTGTCGGATTTTCGATCACTTATGAACATTTACCTACTCGAACATCAA
GTCAAGAGTATTTTGATTACGTCATCGTAGCAAGTGGTTTATACACTACA
GCGTTCTTTCCTGCATACCCTGGGATCGAGACATTTCCTGGTCGAGTTAT
TCATTCTAAAGATTTCCGAAGAAATGAAGAATTGATTCAGGTTCAGAAAC
TTTTGATCGTTGGAACGAGTTTCAGTGCAATGGATATTGCTCAGTTTCAT
CAAAAGTTGAACAGTACTGCACACACTTATCTATCCTACCACAAAGATGC
GCCTTCAATCGTATATCCTGAATCGCCAAAAGTGCATAACATACCATGCT
TGCTCAAAGTCTCGGGAAAAACTTGCTATTTCAAAGATGGAAACAGCTTC
GAATTCGATATGATAATTTTTGCAACGGGTTATCAAATCAATTTCCCCTT
CCTGGAGCCTGATTTGAAATTAACTGCCAAAAAACAATCTTTGATTTACA
ACGATCTTTACAAAGGTGTTTTCTTGCAATCAGAACCCGATTTGTTATTT
ATAGGAATACTAATTCCGTCTTTTTCTTTCGGGTTATATGATGCACAAGC
ATGGTTGATAAAAGAATTCCTTCTCGGTAGATTCGATATACCAAATAGAG
CTCAGCGACAACAGGAGATTGATTTCTTGTGGGATAAATATCAGACTCTT
GCAAAGGTAATGAAAGGTGACCGAAGATTTGCATACGTGTTTCTAAAGTT
CTACTACGAAGAACTGTTAAAGGTAAACTGTTGTCTCTTGATCTATTTTT
CAGATTTCTGTAGGAATCTGTCAAAAATACCTCAATATGAAAATCACAGA
AAGATTTGCAATACCCCTTTTCATAGACCCACTGGGACTCTTTCCCACTG
GAGATATTGGCCAATGTCTTCAGCGGAAAACTAAACACCAACTTTTGTCC
CCGCTGAAAATAATCAAATAAACAAATCCTTACGGCTGCAAAATATTGTG
TTATTTTTTCCACCCCCGCTGAATTTCCTGACTTGAAAACAATAGAGCTC
GAATACCCAGCCATAAAGAAAATGGAGAATGTCACTCCCCATCTAGTTTT
AGTCCATTATTTTTTACCCTAACTAGCTGAAAGAAGCCTACCGGGTTTGT
GAGAAGGGGTGCTTTGCAACAAACTTTCAGTACACATACTTTAATAGTAT
AATGCAAACCCTTTGCACTGATTACATCAGGTGGAGTCACCAAAAAACAA
AACAAAACACAGTCAAATTGCTCCCGATGAGAAAACACCCTCAAATTTTA
ACACATCAGGGAAACACACCCAGCTACCATTTCCACTGGGAGAGTTTTAC
TGGATTTTTGAGTTGTAAGCGATAAAGGGATAAAGTTAGAAATTCCGGGA
TGTTAAAAAGTAAACATTTTATCCCCTTTGAAATTTAACATCATAAAAGA
AAAACAGGGTATTGGTATTATAAAGTCTATTCTAAAGACTCTTTGATCCG
AGAAATTTCACCAAAATATTTATTCAATATAAAGTTATGATACAAAGTTA
ATAAGTGATTGACCCCAAAAAACAGCAGAAAACAGCCTTTTTAGACGTCA
ATCAGCTTATAACTTTGTTTGATATTTTTTGACTGGATGATTATTTTTGA
GAATTTTTTTCACAGTGATGACGTTCGATGAGCAAGGATTCATTTCAGTG
AAAATAATAGTTATAGCACTTTTCTACAAGATCTTCATTTTTTTCTTCTT
CATTTTCATCTTTATTTTTGGATTTTTTTTAAAGATTTTTTTTATTTCAA
ATTGCTCCACTCACTAATATCTTTTCAATGATACCAAATTTATAAAGATT
GAAGAATTCCTTCGAAAGTTATAGGTAAAAGAAAAAAAGAGTGCACACTG
ATCGTGAACAGACTTTAGAGATATAATGACATATTCGGCTCTAAAAGGCC
CTAAAACCTTTTTGAGAATAATTCACGAATTTCGAAATCGTACGAAAATG
ACAAAAAAATACCTTTTATTTTAATTTTGGTGCAATTTGGCGAGAATTAA
TTTTGGCGAATGGCCTACAAATAAAATTGTTGGTGAATATTTGGCCGAAT
TAGCCGAAATTTTTTTCCGCCAAAATATTTTCTTTAATTTATATCTTATT
TTAGGAGACTCCGGGTCATCCTCAGTTTATCAACGAACTGATGGTCGACA
TGCAAGCAAACAACAATGAACGAAGAGCTACGAATGCAATCACTTTCCGT
GAAGATCAATACGTTTCGACGTTCACAAATACTAAAGCAGCCTTTAGCAC
TTCTGGATAG Coding sequence (CDS) from alignment at sc0000044_pilon:434334..437543- >XLOC_040485 ID=XLOC_040485|Name=XLOC_040485|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000044_pilon:434334..437543- (Clytia hemisphaerica_ch_hm2_pilon)
TATATTTCAATCAACAGAAAAATGGTACCCCAACCCCATAAGATTACACG
AAAGCGTATTGCTATCATAGGCTGTGGACCAAGTGGAATGTCTATGTTGA
TAACTTTAGTGAAAGCAAAACAAAATGGTGATCAGATTCCTGATATTGTA
TGTTTTGAGAAGCAATCTATAATGGGTGGACAATGGGTGTATGAATGGCA
GACGGGCGTTGATGAATTTGGAACGCCCGTTTATAATTGTATGTACGAAG
CTTTGAGATTGAATAATGCAAAAGAAGCCCAAGAATACCAGTATATTTCA
ATCAACAGAAAAATGGTACCCCAACCCCATAAGATTACACGAAAGCGTAT
TGCTATCATAGGCTGTGGACCAAGTGGAATGTCTATGTTGATAACTTTAG
TGAAAGCAAAACAAAATGGTGATCAGATTCCTGATATTGTATGTTTTGAG
AAGCAATCTATAATGGGTGGACAATGGGTGTATGAATGGCAGACGGGCGT
TGATGAATTTGGAACGCCCGTTTATAATTGTATGTACGAAGCTTTGAGAT
TGAATAATGCAAAAGAAGCCCAAGAATACCAGGATTACACTTTTGACGAG
CACTTCAAAAAACCGATATCATCCTACCCTCCAAGACATTTGATTCACGA
CTACATCCTTGGTCGAGCTAGAAAATACGATATCAAACGATTCGTGAAAT
TTTCAACATTTGTAAAGCAAGTGGTCAAAAATGAAAATGGTGTCGGATTT
TCGATCACTTATGAACATTTACCTACTCGAACATCAAGTCAAGAGTATTT
TGATTACGTCATCGTAGCAAGTGGTTTATACACTACAGCGTTCTTTCCTG
CATACCCTGGGATCGAGACATTTCCTGGTCGAGTTATTCATTCTAAAGAT
TTCCGAAGAAATGAAGAATTGATTCAGGTTCAGAAACTTTTGATCGTTGG
AACGAGTTTCAGTGCAATGGATATTGCTCAGTTTCATCAAAAGTTGAACA
GTACTGCACACACTTATCTATCCTACCACAAAGATGCGCCTTCAATCGTA
TATCCTGAATCGCCAAAAGTGCATAACATACCATGCTTGCTCAAAGTCTC
GGGAAAAACTTGCTATTTCAAAGATGGAAACAGCTTCGAATTCGATATGA
TAATTTTTGCAACGGGTTATCAAATCAATTTCCCCTTCCTGGAGCCTGAT
TTGAAATTAACTGCCAAAAAACAATCTTTGATTTACAACGATCTTTACAA
AGGTGTTTTCTTGCAATCAGAACCCGATTTGTTATTTATAGGAATACTAA
TTCCGTCTTTTTCTTTCGGGTTATATGATGCACAAGCATGGTTGATAAAA
GAATTCCTTCTCGGTAGATTCGATATACCAAATAGAGCTCAGCGACAACA
GGAGATTGATTTCTTGTGGGATAAATATCAGACTCTTGCAAAGGTAATGA
AAGGTGACCGAAGATTTGCATACGTGTTTCTAAAGTTCTACTACGAAGAA
CTGTTAAAGGATTACACTTTTGACGAGCACTTCAAAAAACCGATATCATC
CTACCCTCCAAGACATTTGATTCACGACTACATCCTTGGTCGAGCTAGAA
AATACGATATCAAACGATTCGTGAAATTTTCAACATTTGTAAAGCAAGTG
GTCAAAAATGAAAATGGTGTCGGATTTTCGATCACTTATGAACATTTACC
TACTCGAACATCAAGTCAAGAGTATTTTGATTACGTCATCGTAGCAAGTG
GTTTATACACTACAGCGTTCTTTCCTGCATACCCTGGGATCGAGACATTT
CCTGGTCGAGTTATTCATTCTAAAGATTTCCGAAGAAATGAAGAATTGAT
TCAGGTTCAGAAACTTTTGATCGTTGGAACGAGTTTCAGTGCAATGGATA
TTGCTCAGTTTCATCAAAAGTTGAACAGTACTGCACACACTTATCTATCC
TACCACAAAGATGCGCCTTCAATCGTATATCCTGAATCGCCAAAAGTGCA
TAACATACCATGCTTGCTCAAAGTCTCGGGAAAAACTTGCTATTTCAAAG
ATGGAAACAGCTTCGAATTCGATATGATAATTTTTGCAACGGGTTATCAA
ATCAATTTCCCCTTCCTGGAGCCTGATTTGAAATTAACTGCCAAAAAACA
ATCTTTGATTTACAACGATCTTTACAAAGGTGTTTTCTTGCAATCAGAAC
CCGATTTGTTATTTATAGGAATACTAATTCCGTCTTTTTCTTTCGGGTTA
TATGATGCACAAGCATGGTTGATAAAAGAATTCCTTCTCGGTAGATTCGA
TATACCAAATAGAGCTCAGCGACAACAGGAGATTGATTTCTTGTGGGATA
AATATCAGACTCTTGCAAAGGTAATGAAAGGTGACCGAAGATTTGCATAC
GTGTTTCTAAAGTTCTACTACGAAGAACTGTTAAAGGAGACTCCGGGTCA
TCCTCAGTTTATCAACGAACTGATGGTCGACATGCAAGCAAACAACAATG
AACGAAGAGCTACGAATGCAATCACTTTCCGTGAAGATCAATACGTTTCG
ACGTTCACAAATACTAAAGCAGCCTTTAGCACTTCTGGATAGGAGACTCC
GGGTCATCCTCAGTTTATCAACGAACTGATGGTCGACATGCAAGCAAACA
ACAATGAACGAAGAGCTACGAATGCAATCACTTTCCGTGAAGATCAATAC
GTTTCGACGTTCACAAATACTAAAGCAGCCTTTAGCACTTCTGGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044_pilon | genome | sc0000044_pilon:434334..437543 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1219-1374:157 |
| Aaloc | 292-1218:2466 |
| Aaloc | 1-291:3211 |
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