XLOC_040472.2 (mRNA) -

Overview
NameXLOC_040472.2
Unique NameXLOC_040472.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000028_pilon:739863..740480+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040472.2 ID=XLOC_040472.2|Name=XLOC_040472.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=618bp|location=Sequence derived from alignment at sc0000028_pilon:739863..740480+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATATTTGGTTGGTAATTTTTTGACGAGTTGTATGTTCAAGTTAAT ACTTgtcattttcacattttcaaCGGAGGTCTGGGCTCTATGTAACCATG GTACTGAGTATAAATACACATGCAGAAAATTACCGAGTTATAACTCGTAC CAATGGGCCAGGTGTTATAAAAACtctgaaatcaaaacatttggcaAGAA CCATACAAACGGTTGCTTTGATGATAGCAGACAGTTTTGTTATTACCCTT GCCAAATGGAACGCCATGAGCAATTTTACGGATCTGTGAGCAAAGACTGT AAATGTGCCTTAATGGGCCACCCACCGCCTTGTAACGAGAGAACGCGCGG GCAACAAACATGTCGCTCCGTCGAAGGTTATTTCGGGTTCACTAAAATGA CTTGTTGGGATAAAAAATATATCAGACGTATCACAGGTAATTCGTACCCC TGTGGTGCTGAGTTTTGTTGGTTGCCATGTGAACGAGAGAAAAACCAGAA ATCGAATGGAGACGTTTCGGCAGAGTGTTCGTGTACTTATTCCAATGCTT GGAGGAGAGGAGGAGATTCGAAATTATTATTGACATTTTTGGTTGGGTTC TATGTGTATAATTCTTGA

Coding sequence (CDS) from alignment at sc0000028_pilon:739863..740480+

>XLOC_040472.2 ID=XLOC_040472.2|Name=XLOC_040472.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000028_pilon:739863..740480+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATATTTGGTTGGTAATTTTTTGACGAGTTGTATGTTCAAGTTAAT
ACTTgtcattttcacattttcaaCGGAGGTCTGGGCTCTATGTAACCATG
GTACTGAGTATAAATACACATGCAGAAAATTACCGAGTTATAACTCGTAC
CAATGGGCCAGGTGTTATAAAAACtctgaaatcaaaacatttggcaAGAA
CCATACAAACGGTTGCTTTGATGATAGCAGACAGTTTTGTTATTACCCTT
GCCAAATGGAACGCCATGAGCAATTTTACGGATCTGTGAGCAAAGACTGT
AAATGTGCCTTAATGGGCCACCCACCGCCTTGTAACGAGAGAACGCGCGG
GCAACAAACATGTCGCTCCGTCGAAGGTTATTTCGGGTTCACTAAAATGA
CTTGTTGGGATAAAAAATATATCAGACGTATCACAGGTAATTCGTACCCC
TGTGGTGCTGAGTTTTGTTGGTTGCCATGTGAACGAGAGAAAAACCAGAA
ATCGAATGGAGACGTTTCGGCAGAGTGTTCGTGTACTTATTCCAATGCTT
GGAGGAGAGGAGGAGATTCGAAATTATTATTGACATTTTTGGTTGGGTTC
TATGTGTATAATTCTTGAATGAGATATTTGGTTGGTAATTTTTTGACGAG
TTGTATGTTCAAGTTAATACTTgtcattttcacattttcaaCGGAGGTCT
GGGCTCTATGTAACCATGGTACTGAGTATAAATACACATGCAGAAAATTA
CCGAGTTATAACTCGTACCAATGGGCCAGGTGTTATAAAAACtctgaaat
caaaacatttggcaAGAACCATACAAACGGTTGCTTTGATGATAGCAGAC
AGTTTTGTTATTACCCTTGCCAAATGGAACGCCATGAGCAATTTTACGGA
TCTGTGAGCAAAGACTGTAAATGTGCCTTAATGGGCCACCCACCGCCTTG
TAACGAGAGAACGCGCGGGCAACAAACATGTCGCTCCGTCGAAGGTTATT
TCGGGTTCACTAAAATGACTTGTTGGGATAAAAAATATATCAGACGTATC
ACAGGTAATTCGTACCCCTGTGGTGCTGAGTTTTGTTGGTTGCCATGTGA
ACGAGAGAAAAACCAGAAATCGAATGGAGACGTTTCGGCAGAGTGTTCGT
GTACTTATTCCAATGCTTGGAGGAGAGGAGGAGATTCGAAATTATTATTG
ACATTTTTGGTTGGGTTCTATGTGTATAATTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040472.2XLOC_040472.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028_pilongenomesc0000028_pilon:739863..740480 +
Properties
Property NameValue
Aaloc583-621:580
Aaloc1-579:1