XLOC_040462 (mRNA) -

Overview
NameXLOC_040462
Unique NameXLOC_040462
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000356_pilon:46966..47650-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040462 ID=XLOC_040462|Name=XLOC_040462|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=685bp|location=Sequence derived from alignment at sc0000356_pilon:46966..47650- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGCATATCCATGGCTGATCTTAAAAACATTTTGTGTGCCCTAGAAGG TAAGAGAAAGAATATCTATCTATTCTGAAAATCATAATTATCATATCAGT TTCAAAGAAAAAAATAATAAGTAAGAAAGTCAGGAGTGTACTGGACTAAG CTTGTTTACTCTGCCATGGGTAATCAAAATAACTTGTTCATATTTTCAGA GACAGCATTTGGTTCAATACAGATCGATCAACCTGAAGATCAGGCAGCCG CTATTGAAGAACCATCTAAAGATGATGAACGTGAGAAAAACGAATACACT CCTGGAATGCATGTAGCAGCTGCATGGCTAAAGGAGGATAGCACAGAATA TACATGGTATTTAGGTGAGTTGGGTTGCAATGGAACATTTTTCCATCCTT TTTCCAGTTTAGTTTAGAACCATGCTAACTGTTCTCTTTTCATTCATAGG TGTGATAGATTCAGTTGACAAGGATTGCTTGAAAGTTTCATATTTCTCAA GAAAGGACAAAGCTGGCAGCCAATGGACATTCCCAGAGGAAGCAGATATT CAAGATACAAAATATGAACAAATCATTAAAAAGGTGGAAAAGGTTGCTTA CCAGTGCACCGTTAGAATTAGATGCCTCATACCAAAACAACTTGCAGATG ATATTACAACAAAATTGAACATTTTCAAACAATAA

Coding sequence (CDS) from alignment at sc0000356_pilon:46966..47650-

>XLOC_040462 ID=XLOC_040462|Name=XLOC_040462|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000356_pilon:46966..47650- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGCATATCCATGGCTGATCTTAAAAACATTTTGTGTGCCCTAGAAGA
AAAGCATATCCATGGCTGATCTTAAAAACATTTTGTGTGCCCTAGAAGAG
ACAGCATTTGGTTCAATACAGATCGATCAACCTGAAGATCAGGCAGCCGC
TATTGAAGAACCATCTAAAGATGATGAACGTGAGAAAAACGAATACACTC
CTGGAATGCATGTAGCAGCTGCATGGCTAAAGGAGGATAGCACAGAATAT
ACATGGTATTTAGAGACAGCATTTGGTTCAATACAGATCGATCAACCTGA
AGATCAGGCAGCCGCTATTGAAGAACCATCTAAAGATGATGAACGTGAGA
AAAACGAATACACTCCTGGAATGCATGTAGCAGCTGCATGGCTAAAGGAG
GATAGCACAGAATATACATGGTATTTAGGTGTGATAGATTCAGTTGACAA
GGATTGCTTGAAAGTTTCATATTTCTCAAGAAAGGACAAAGCTGGCAGCC
AATGGACATTCCCAGAGGAAGCAGATATTCAAGATACAAAATATGAACAA
ATCATTAAAAAGGTGGAAAAGGTTGCTTACCAGTGCACCGTTAGAATTAG
ATGCCTCATACCAAAACAACTTGCAGATGATATTACAACAAAATTGAACA
TTTTCAAACAATAAGTGTGATAGATTCAGTTGACAAGGATTGCTTGAAAG
TTTCATATTTCTCAAGAAAGGACAAAGCTGGCAGCCAATGGACATTCCCA
GAGGAAGCAGATATTCAAGATACAAAATATGAACAAATCATTAAAAAGGT
GGAAAAGGTTGCTTACCAGTGCACCGTTAGAATTAGATGCCTCATACCAA
AACAACTTGCAGATGATATTACAACAAAATTGAACATTTTCAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040462XLOC_040462-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000356_pilongenomesc0000356_pilon:46966..47650 -
Properties
Property NameValue
Aaloc217-450:235
Aaloc52-213:485
Aaloc1-48:686