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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:627819..632116+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040460 ID=XLOC_040460|Name=XLOC_040460|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4298bp|location=Sequence derived from alignment at sc0000028_pilon:627819..632116+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAACAGTTACCAGACAAGAGTATTGGCACCCTGGTCAAATATTACTA
CACGTGGAAAAAGAGTAggaataaaaaaagtttgatggaTAAGAGCGAAG
CAAGAGAGTTGGCCATCATTAATGGTATATTTGCTGATGACAGTCCCAAT
GATGATTCCAGTGACAGCGATTATGAGCCGGTTGAGAAGGTAATATTGTT
TTTGAACCTCCAGAAAAATAGCATTTTCTGAACCCTCGTCATTAGGtgaa
atctttagaaaaaatccCAAATTAGAATTCGGGCAAATTTATAATTTGTG
ACCCAATTTCTGTGTGTGGTAAATAGCCAAAGAACTCTTtttcaatcttt
gaaaaatgggggggggggttcagaccccttTCCTCACAATGGTGATATAT
AAGAACCGTTTCGAAATGAATATTATTATCTTTTAATCATGTCACCTCCT
ATTAAATTTTATGGTTGGTAAAATAGTTATTCAATCTGATTCTGCTACCG
AGAAATATAATGTACTGGTATAATTATAATGTTTGAAAGGTATACTGCAT
TTTTCGAACGAATTTAGTAAAATTTGTTTGATTAAAAACTGGCCCttttt
ttCCTGTTTCAGAAATCGCGCTCCAATAGAAGTACAGATAaggtaataaa
attttaaagtgtttGTTTGTTGTGCTGAAAATTAACGATTACTctaaagt
ttaaaaataatatCATCATGACATATGTTGCTTTACTTGATAAGTCTGTT
CTAATGTAATGCTAGGTTCTATGTTGgcatatatttttaaaatattcacc
CGATAGTAATttatttaattacaaaaaaacacaatttcataGAAATGTTA
TAATTGGagaattcaattttcaaatctaagctaggctacgtcatatcttc
cttcgtttcaaGCGTAAACCTCCTACTCTTCGAGTAAGACCTAAAAGCCG
GGAGCTATCTATTGTGTTGACTAATCTAAGATGGCAATGATAATtaaaaa
ctagtaaacaaataaaacatcaaaatagaagaaacaaataaaatGTCTTT
TTAATTTCTAGAACACGCTCAACAATCATACAATGAATCATCCAATcttc
caacaacaacaacaacaacaacaacaacaacaccaacaacattcttcaca
caacaatctgaacaacaaaccaaGTCCAATGCTGTCCACTAATTGCGTCA
ATTGTGCTGGTGTAACACCTCAAATGCATTCCACGCCTAGAGGGAAAATG
TGTGTGCCCTGCTACGAGTACTGGAGGTAGAGATGACTTTTGTATTttgt
tacatattttttttaaggaGTTAAGATTCCATTTGGGTAATTTCAAGATT
GTCAACCATGATTTAATCTATATCCAATTGAACCCCTTCTATGGATGCTT
TCAAATGCTGGATGGGTGGCGGCGCTTCTAGGTCTCTACTGACGGTTTCC
AGTCAAAAAGGAGCGTGACGTAACCACGTACCCTTCCTCTGGAACGGCCG
TACATCTCTCTACATCTTGTGAAATCCGAGTGAAATCAACGGAGCAAGTT
TAAATCATTTATCGGAATTGAGTGTCTTGACAAAATTCTCGTGATAAAAT
TAGATCAACAAGCCACTTTCCACGCCCTTTGAGCCGCCGCCCCTtcttaa
aaacaccaaaatatttagaaaagcaCCCTTGATAGTTGAAAGGCACTGGA
AAAAGTGCAGATTCTGTTTATACAGTTGTGGCTTGGATAAGACGAGAGAA
AGGCTATTTCTATAAGTTATCCTATGAGCTATTCCTATGAAAAAATTCAC
AATACTCCATCATTAGATTggatcgtttttttttttaatctaactTTAAT
GCTTGTTGTTTCTCTTTTAGACGAACAGGTATTATTCGACCGCACGACAA
AGACAATCCTATCTCGTTGTACTCCGCTCCTCAGtataaatcaaagaaaa
aaccaCCCAAGGTATACGATTTAATGATGATTAGACCAGACGTCATAACT
TTTACGCAGTAACGTTTATTTCATTCCACTCCAAACATTAGATTTTTTGG
CGTCACTTTAAACCTTCCAAGCTCTTGCAGTATagtgaaaaaaatcgaat
ttgcgtcagaacactttttttcaagaatagTGTAACTCTTCAATGAAAGT
GTAACTCTTCAATGAAAGTGTAACAAAGTGTAACTCGTCAAGAAAGGGAA
CGAAAAATGTTCCGGTTTTTGATGAGGTGCCTTTTCAGGAATTTTGAGCG
AAGGAAGTTATTATTAAAAGTAGATAAAACTTATTATTGCTGATTGCTGG
TTTTTCAATACTATACATTCTAAAGAAACACTCAAGTCTTTGGTTGTTCT
CCTGAATTTCATCCAGAAAAATTATTGCATCcccaaatcaaatcaaattc
aatcaaactgttcaaatttatattcaatttcccataaattatataaaact
tcaGTTTTGATTTAAACTCGAATTTTCAGGGAATGTCATTAGGTACGGAG
ATGTTGATTGACATAGCACAAAGTCATGGTGATTCACATGTCAGACCTCT
AGAGGTGGAACTTATTAGCTTGAAGCGTCAAATCATGACCGATAAGCAGA
TCTTACAAGAACAAACACTGGCTCTGTCTGGTAAAGTGGAACAGTTACGA
CCCCTCTCTGTAAGTATCTGatgattcaaatttttaaggcttttcCTACA
CGGTTTTTTATGTTCACACCCATTCATAAAGTTATCATGAAAGTTATATT
ACAGGAATCGTGCTGACAAAGAACTTATTTATTAACTTATTAAGTCTCAG
AGTTTGTGGTTTTTGATTCGTTGCGGCTACACCCAGATAAGATGGAGTTT
CCATAAGATGCTTTAGTAATTGGTCATTTTCAGTAATAAGAATGACGTGT
TCTTtacaaaaagtaacaaaattgttttattactggttaacgaccaacca
aatcaaatgagagcttgtaaaaactctatCTCGTCCCGCTACACCTAGCT
ATTTGTTGGATGTGCCTCATTGattaaagaatctaaaatacTGTTTAAAA
TCACTTTTCAGCTGGCTCAAAAGTTGAATTCACGCTGGACAAACGAAGAA
TTATTAATTGCCGTTCAATGTAAGATAAGATCCCTAAATAGTTTCTTTAA
TGACCGAACACTGGAATTATTGTGATGCACTCCAAGTAAAATGCTTAtta
ataaattttattgaaaatcttaTCACAATGAGACGCTCATAATAGCATTC
CTTTTATGTAGATGTTTACTAGATGTcgtaatctcataacagatccaTTC
TGAGCATACCAcactctgctctaaagggatatggaACATATGGcgatctg
acctggttgttcagccaaaGCAATCAAAAACGCGTTGCTTTTTGCTttaa
aacgaaagcgaaagcgaaagcgaaagcgaaagcgaaagcgaaagcgaaag
cgacttgGTCTAATTTTTATGTATTGTTTATGTAAATGATTGACCTCTGA
TTTTGATGCGATTGTTTTCCTTTAGCCAATCACCGCGCTCATTTTaaata
ttcatcccaaatctggatgaaaaagatcaaagcagTGCGCAAACCTGGgt
agattctcttacggagacATGGCCTTTGGAGTGAATACGTggtatcagaa
tctgctcggcgATAATAGATGTGGCAGCTTTTTTCTATGCATAAACAAca
taatattttcagttatttAGATATTTCTTATTTTCGGTTTGTTTATACTA
TCTACACTTACAGGTGTTCGAAAATatggtaaaaattttgaagcaatgGC
TGAAGTCTTAGGCAACAAGAATGAATCTCACTGTCGAAGCTTCTTCATCA
ACCACCGACGTCGTTTCAACTTGATGGAAGTCCTTGCAGAGTACGAAAAG
GAAAACAATATACCACGTGATGAAAGCAAACTCAATGATTGGTCAGATGA
AATGCCACAAGAACCACACGATGCCTATGGaggtattttgatattttttt
atcttcaccTGTTTTAGACAATGAATCATCCTTGTCCAATATTCTGCaat
gtttcttaaaatcagGACCCAGATAATAGACAACACGTCATTAAAAGGCC
TGGTTTCTTTCCTTCTTTCAAAGATTTGTTCCACttttaaaaattctatt
ttcctAAAGGATAGAGTTTTCTGAGAAGCTTCAATTCAAACAgactcaaa
aagttttgaacattCTTTTCTCTTTTGAAGGTATGGCACCCGAAGGAGGC
CCTCCGCCGTTGGTTAGCAACGCTACTTCCGTTACTGTTTCTTCATAA Coding sequence (CDS) from alignment at sc0000028_pilon:627819..632116+ >XLOC_040460 ID=XLOC_040460|Name=XLOC_040460|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000028_pilon:627819..632116+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAACAGTTACCAGACAAGAGTATTGGCACCCTGGTCAAATATTACTA
CACGTGGAAAAAGAGTAggaataaaaaaagtttgatggaTAAGAGCGAAG
CAAGAGAGTTGGCCATCATTAATGGTATATTTGCTGATGACAGTCCCAAT
GATGATTCCAGTGACAGCGATTATGAGCCGGTTGAGAAGTTTCAACAGTT
ACCAGACAAGAGTATTGGCACCCTGGTCAAATATTACTACACGTGGAAAA
AGAGTAggaataaaaaaagtttgatggaTAAGAGCGAAGCAAGAGAGTTG
GCCATCATTAATGGTATATTTGCTGATGACAGTCCCAATGATGATTCCAG
TGACAGCGATTATGAGCCGGTTGAGAAGAAATCGCGCTCCAATAGAAGTA
CAGATAagAAATCGCGCTCCAATAGAAGTACAGATAagAACACGCTCAAC
AATCATACAATGAATCATCCAATcttccaacaacaacaacaacaacaaca
acaacaacaccaacaacattcttcacacaacaatctgaacaacaaaccaa
GTCCAATGCTGTCCACTAATTGCGTCAATTGTGCTGGTGTAACACCTCAA
ATGCATTCCACGCCTAGAGGGAAAATGTGTGTGCCCTGCTACGAGTACTG
GAGAACACGCTCAACAATCATACAATGAATCATCCAATcttccaacaaca
acaacaacaacaacaacaacaacaccaacaacattcttcacacaacaatc
tgaacaacaaaccaaGTCCAATGCTGTCCACTAATTGCGTCAATTGTGCT
GGTGTAACACCTCAAATGCATTCCACGCCTAGAGGGAAAATGTGTGTGCC
CTGCTACGAGTACTGGAGACGAACAGGTATTATTCGACCGCACGACAAAG
ACAATCCTATCTCGTTGTACTCCGCTCCTCAGtataaatcaaagaaaaaa
ccaCCCAAGACGAACAGGTATTATTCGACCGCACGACAAAGACAATCCTA
TCTCGTTGTACTCCGCTCCTCAGtataaatcaaagaaaaaaccaCCCAAG
GGAATGTCATTAGGTACGGAGATGTTGATTGACATAGCACAAAGTCATGG
TGATTCACATGTCAGACCTCTAGAGGTGGAACTTATTAGCTTGAAGCGTC
AAATCATGACCGATAAGCAGATCTTACAAGAACAAACACTGGCTCTGTCT
GGTAAAGTGGAACAGTTACGACCCCTCTCTGGAATGTCATTAGGTACGGA
GATGTTGATTGACATAGCACAAAGTCATGGTGATTCACATGTCAGACCTC
TAGAGGTGGAACTTATTAGCTTGAAGCGTCAAATCATGACCGATAAGCAG
ATCTTACAAGAACAAACACTGGCTCTGTCTGGTAAAGTGGAACAGTTACG
ACCCCTCTCTCTGGCTCAAAAGTTGAATTCACGCTGGACAAACGAAGAAT
TATTAATTGCCGTTCAATCTGGCTCAAAAGTTGAATTCACGCTGGACAAA
CGAAGAATTATTAATTGCCGTTCAATGTGTTCGAAAATatggtaaaaatt
ttgaagcaatgGCTGAAGTCTTAGGCAACAAGAATGAATCTCACTGTCGA
AGCTTCTTCATCAACCACCGACGTCGTTTCAACTTGATGGAAGTCCTTGC
AGAGTACGAAAAGGAAAACAATATACCACGTGATGAAAGCAAACTCAATG
ATTGGTCAGATGAAATGCCACAAGAACCACACGATGCCTATGGagGTGTT
CGAAAATatggtaaaaattttgaagcaatgGCTGAAGTCTTAGGCAACAA
GAATGAATCTCACTGTCGAAGCTTCTTCATCAACCACCGACGTCGTTTCA
ACTTGATGGAAGTCCTTGCAGAGTACGAAAAGGAAAACAATATACCACGT
GATGAAAGCAAACTCAATGATTGGTCAGATGAAATGCCACAAGAACCACA
CGATGCCTATGGagGTATGGCACCCGAAGGAGGCCCTCCGCCGTTGGTTA
GCAACGCTACTTCCGTTACTGTTTCTTCATAAGTATGGCACCCGAAGGAG
GCCCTCCGCCGTTGGTTAGCAACGCTACTTCCGTTACTGTTTCTTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:627819..632116 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 973-1038:4233 |
| Aaloc | 754-969:3766 |
| Aaloc | 694-750:3062 |
| Aaloc | 514-693:2480 |
| Aaloc | 424-513:1872 |
| Aaloc | 259-420:1113 |
| Aaloc | 220-258:1062 |
| Aaloc | 190-219:613 |
| Aaloc | 1-189:1 |
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