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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:660660..663935+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040456 ID=XLOC_040456|Name=XLOC_040456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3276bp|location=Sequence derived from alignment at sc0000028_pilon:660660..663935+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAACGAAGGGTGGAAATTATCATTTGACGTCATGATTAAAGGAACAGT
ACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGTGGAA
TAGGTATCTTCATGTTTAAGTTTACccctctttcattctttaaaaaCTTA
TCTAGAGTAGAAGCTCTGTAGTTTAGGACTTCCCACCATTGGTCCTTTTT
TGCGCGTGGTTCACGGCCAGCCGGTTCGTCCAGCTGTGAGCCGAGTAGAA
TAGTGGAAGAAACTTAAATTCGAATCAGTGGAACCCCTGGTTTGTGGCAC
CAACGCCTCAGACGCCTCAATCATCATAATGTTAATGTTGAATTTACACT
GTAAAGAATAGTCTACCTACATGCTAGTGCTACCACTAATTCAATGAGAT
TTTGCTCCTTTTTCCCTCTACACTGTATTTTTTAAAGTACTTTATACGCA
CATCCTTCATCATACTTTCATCCCCATCGTTAATTTTAAACCAGAAGTGA
GAAATTGGATCTAAATCGGGATGAAAGACATACGGGTAAGGATGAGAGTT
TGGCTGGGTCCTTTCAATTTGGATTGTTTCCTACAGGGGATGGTTTCTTA
GCCtagctttcaaatgagggggggggTCCATATCGAATCTGCGATTCGAG
GTTGTTCCTGAACCTTACAAAATGTTGACGAACTAACATATTGACCGTGG
GTTTCTTTTCTATAGGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGA
GAAAGTCGATTACATATTTGCACCAAcattgaaaattcttggaattGGTG
TAAAGATTCAGCCACGTTTGCGCTAAACAAGTATCATTCCGTCGAGTTGG
AGCAGAAAAGGGTCAGTATTTgtttaaaatcctcaaaacttgAATTTTCT
TGGTTGATAGAACAATTAATCACACTGATTTTATAATAGAATCCACTcta
caaatttgttttcttaaaattcttaaaacattcagaggtttaccgtgtcc
gtaagaaaattattaccagctgttatcaggttagcaCATGCCACGCTCTG
GATATGGCGAATGAAACGATTTGAcgatttcagcaaaaaaaataaaaaac
gcgTTGCTTTTTGATTGAAAACGATAGCGAAAGTGGCTCATAGAGTGAAT
ACGTGCCATGCATAGAGTATTACAACCTATGCTCAGCGATAGAGGAGCTA
GGTAGAgtaaatattttcacttaattcATACATCATCAATTTTATAGGAC
GGTGGTACTTTTGTTTACTCAATCAAAATCGACGGAAAGCAATTGGCTAC
TATTAACAATAGATATCCTCAGTCCCATGACAACATAAAAGCATATCTCT
CTGATCAATTCCATCCGGCATCAAATGCTGTTGTTAGAAACATCATCTTC
CAAAACACGGACTGTAAgttacactcccttctcacagaaccaCTGGGAAC
CCACCCCACTggagaaattggccaaaatatcgccccggtggaaaattatt
ctccaatttttgtccccactgtaAAATATTCAGATAATtgaatcctcact
gcaaaatacacgtttttttcatttagaacccagtttataagaaaatttag
gctgaaattcgtcgaaagattaagaacatcgtaagaacatgcccagcctc
agtttgaaaaaaatgacaagaaactacaattttttcctctttttaaggag
ttttaaccgaacttagggttgtattttctaaaatcgagagtcaaatattg
tccaaattttaccaattttaagtgctctttattttacatgatattgtcga
tttaaagtagtttgaaaaattaagaacgcatgtaagaacaacattttagg
ctgaaaattgctaaaaaaataagcacatcctgCGCACAATTTATGTAGTT
GGTTGGTTggctatgaaaatcaaaataataaaaacgaCAATTTTCGATTT
TAGCAATATTACGTTGTGGTGACAAATGTACACCAATCAGAAGTCAAGAA
AATGTTCAAGGAGAACAAAGTAAGTCCATGATACTTACTTTGATTTGTTA
CTGTCAATTTCCTATAATTTGACCCActattatttaaaaatctttctgTT
AATCAACCAAGCAATCTGAAATAAGAAACGTCTTACTCATCATTTTCACT
TGCCTTAAGAGAGGCTCCACTGGAATTTGTCCTATAAATCTTTTGGTTAA
ATGTAATAGAAATGTAAAAGAAATTATATTTGGAACCTTTTATCTGTTTC
CCATTGAGAATAGATTATAGTAGATTGTAGGTAGCATGACACACATTAGG
AtgtctttcttattttttttttgctcatagaGTCCAATAGATAGGTCTGA
TATGTTTGATGTGGATAGCTCAGTAATCTAGGACGTTTAGAGAGTCTTTT
GATTGCATTAACTATGAACTGAACGTTCGTTCTTCGTTCGTTTAGTATTT
CATATATACTCTCTATATATTACGACTTATTCTTCTCTTCACAGCCGAAG
TATTGACATTCGACAAATACCAATGTacgaaagaaaatgaaatccaTATG
GAGTTGAATCttccaaaaaaaacacaacttATTCGTGGCTCATGCGTTGA
AATCACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGACT
TCATTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGGGT
CAAAAgaaaacatccttccaagaggGTTGGGTCACAAGTAAAATTGATTC
TTCCTACAGACTTGCAGATAAACCATCGGTGAGTTAGGATATGTTTCTAA
ATAGTCGGttcaaagaaatcttttatttaAGATTGTATCCAATTTTTGCC
ACACAACTTACGCATCTAAAAAGTATCACAGTTTCCTTGTTCACACGAAC
AACACTGACACCACCGTGCCACAGATCTGCCCAtccccaaaaaagaaaaa
atgtttcatcTCCACTCTACTCAAAACTACTCTGACTTTTATCCCCACAT
GATTTTCAGTTAAGCCCGATGGATTTTGTCTCCTTTTCGGATTTGAATGC
TCAATTTCATCCTCGATTTTTATTACAGAATTTCACCATTATTCCACAAG
TTATAAAAGATCATGACAACTTTACCTTTCATTCATTCAGCATTATATTT
TGCAGCCTAAAACGACTAATTTATGTTTTACCTTTACAGGTTGGCTTATT
TCTGAAATCGTATTTCAATGATAATTGTCCCTTGGTTAGTTTCGCTGCTT
TCAAACTGTTAGATGGTCCCTGCTGA Coding sequence (CDS) from alignment at sc0000028_pilon:660660..663935+ >XLOC_040456 ID=XLOC_040456|Name=XLOC_040456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000028_pilon:660660..663935+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAACGAAGGGTGGAAATTATCATTTGACGTCATGATTAAAGGAACAGT
ACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGTGGAA
TAGGTCAACGAAGGGTGGAAATTATCATTTGACGTCATGATTAAAGGAAC
AGTACGAAGTTGGACCAACTTGATCAGTTTCAATAATGGAAAATCCAGTG
GAATAGGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGAAAGTCGA
TTACATATTTGCACCAAcattgaaaattcttggaattGGTGTAAAGATTC
AGCCACGTTTGCGCTAAACAAGTATCATTCCGTCGAGTTGGAGCAGAAAA
GGGTGCTCGTGTTCCTTCCATTTTTGTTCGCCCAAGAGAAAGTCGATTAC
ATATTTGCACCAAcattgaaaattcttggaattGGTGTAAAGATTCAGCC
ACGTTTGCGCTAAACAAGTATCATTCCGTCGAGTTGGAGCAGAAAAGGGA
CGGTGGTACTTTTGTTTACTCAATCAAAATCGACGGAAAGCAATTGGCTA
CTATTAACAATAGATATCCTCAGTCCCATGACAACATAAAAGCATATCTC
TCTGATCAATTCCATCCGGCATCAAATGCTGTTGTTAGAAACATCATCTT
CCAAAACACGGACTGACGGTGGTACTTTTGTTTACTCAATCAAAATCGAC
GGAAAGCAATTGGCTACTATTAACAATAGATATCCTCAGTCCCATGACAA
CATAAAAGCATATCTCTCTGATCAATTCCATCCGGCATCAAATGCTGTTG
TTAGAAACATCATCTTCCAAAACACGGACTCAATATTACGTTGTGGTGAC
AAATGTACACCAATCAGAAGTCAAGAAAATGTTCAAGGAGAACAAACAAT
ATTACGTTGTGGTGACAAATGTACACCAATCAGAAGTCAAGAAAATGTTC
AAGGAGAACAAACCGAAGTATTGACATTCGACAAATACCAATGTacgaaa
gaaaatgaaatccaTATGGAGTTGAATCttccaaaaaaaacacaacttAT
TCGTGGCTCATGCGTTGAAATCACATACAAAGTTGGGCGACCTCGCAACA
ATAACCGCAACTGTGACTTCATTGTCTACCAGAGACGTGCCGACAACAAC
AAATTGGAGTATTTGGGTCAAAAgaaaacatccttccaagaggGTTGGGT
CACAAGTAAAATTGATTCTTCCTACAGACTTGCAGATAAACCATCGCCGA
AGTATTGACATTCGACAAATACCAATGTacgaaagaaaatgaaatccaTA
TGGAGTTGAATCttccaaaaaaaacacaacttATTCGTGGCTCATGCGTT
GAAATCACATACAAAGTTGGGCGACCTCGCAACAATAACCGCAACTGTGA
CTTCATTGTCTACCAGAGACGTGCCGACAACAACAAATTGGAGTATTTGG
GTCAAAAgaaaacatccttccaagaggGTTGGGTCACAAGTAAAATTGAT
TCTTCCTACAGACTTGCAGATAAACCATCGGTTGGCTTATTTCTGAAATC
GTATTTCAATGATAATTGTCCCTTGGTTAGTTTCGCTGCTTTCAAACTGT
TAGATGGTCCCTGCTGAGTTGGCTTATTTCTGAAATCGTATTTCAATGAT
AATTGTCCCTTGGTTAGTTTCGCTGCTTTCAAACTGTTAGATGGTCCCTG
CTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:660660..663935 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-855:3190 |
| Aaloc | 487-768:2497 |
| Aaloc | 421-483:1956 |
| Aaloc | 253-417:1248 |
| Aaloc | 109-252:718 |
| Aaloc | 4-105:1 |
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