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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:665029..673992+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040455 ID=XLOC_040455|Name=XLOC_040455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8964bp|location=Sequence derived from alignment at sc0000028_pilon:665029..673992+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACAAGATTTATTCTAAAGAACTTCACTCAGatcttcaaaagatt
ttgtaGTAGAAGCTACCCAAATCAGTCTGCTGTCACAGTCACAGAAAGTG
AGATCCAAAAAAGACTAATTGACCCAGTTGGTCGAAAACAAACGTTCCAA
AATCTTCATGAAAaaggtaaaaacttttttttcaaagtcctTTCACGTAG
CGGCATAGTTCTCTtttggaatagaccttttttcaaagaggccaccctgt
tgaataattatgtagtccagggACAGTCAGTCAGGAGTTCTATCCTAATt
aagcattttttttttgatcgcatggactttcttaattaggattatccctt
tgtttttcaatcctaattaagaatatatatcgaatttctagtttttttcc
aaaaatacaaatttccgCAGATTCTTATCAGCCTCCAATGAAAGAATTTA
GTGTgtagagcagattttgaaagtttgatatagtaaggggacccgtccat
attcatttgacaacgcaaaacgtcaaattgacgttatcctctgaaccccc
ccaccccccacagataacgtcaagcgatgtactgatgtataccaaaagtt
gtagccatttttcatcaaagtttacCCGTTCCGTCGCAAAGTCCGTACTT
GGTTGTACCCGtgcgtgtatgtgttcttttaactaatgacctttattcaa
aaagaaattaaaagctccacttggcgctaggtcggtgccgtgctttaggc
gtaccaccttctttgcccacttgcgatgtggttcgctcgatcgcgcaaac
aatgaaaatatgatgtaatgatatcatagcgcaaaccaatgggattatgc
gagcagcaaattttcatgtacttCATACACGAATATGTTTTCGAAAGCTT
ATAAAgtatagtgtggttggtggttacaaatatccgcgattttcacaaaa
aggtatacctttgatttcttataacgtcaaacctaacttttgaaaacccc
cccaccccctcataacgtcaatttgacgttttgcgttgtcaaatgaatat
ggacggctcccctaATATGGATGGAGTCTTGAGTTATGACATTTAGAAAA
AATGTTCTATTACCTTCGACAAAAACGCGTATAAAACGCGGGTGTATTGC
CCTATCTACACTGTAGCAGATAAACATTTATAATGTAGCACGGGCTTTAA
ATATTCCTAATAAGAACTAACGTGCCTAATTAGGCAGATTTTTACTTATG
GCGTCATTTTGAAGCCCTCCgcccaaattttgttttgatttttggctcaA
TATATCATCTTCGACCTGCTCTATCTATTGCTCTAGTTAGAATTTGCGGA
TTTTGTTTGTTGGTGAAgaatctgaattttaaaaatcatattcttaatta
ggattgaaaaacaaagggataatccTAAATAAGAAAGTCCGTGCGATCta
aaaaaatatgcttaattaGGATAGAACTCCTGACTGACAGTCTGAGAAAT
CCTTCGAATTGCACGCTTAAAATTCCGAGATTTAAACGCGTAATTGCACG
GCTATCAAattgtaaagtttttaaaagtgtttttacctATCAATTTCATG
TTCCAAATAATCTAAATCAGTATTATAATCATTGCTTACATTGAGATACA
TCATTTACAAGTTattagaaaagaaatgaaaacacaTTTCGTTTGTGCGA
GTTCAAAATAGacaattttcctcgagttttctcggaaaaaaatctggaat
gCTTGGTCAATTTTACGCAAAATTTTACGAAGATTCcaattcaaaaatca
gtttttgtctGTTTGACCATGGTTCCAtccgtttaaaaaaaaagtaagcc
CCACTATATTGCTCAAGCTTCTTCAAGCAGGGCGGAAaattaagcgtgca
attgcacatGGGTGGACTCGGGCGGACTATGATAAGCGCACATTTACAAG
TTTACGCCTGCGGAAGTTAAGCGTGCAATTAGAAGGATTTCTCAGACTGC
AGGAGAAAGACAATAATAAAACCacacataattattacaatatgcatgtt
ACAGTAattcatagtgtgcagagggttctgaacccccccattaatatttc
atccccccctataaaggtatcccccctatttttaaaattttttgatcccg
caccatttacaggggtccgagcccccagcatataatttgtactcccagta
ttggggaagaattttgatgaatgaaatatatttttcagtgtgaattcgta
ccaatagtcaatgaacttgaaaacactagcaaataaacagtaaaaagtta
ctatcccccccccatttttatttgatcccccctataagctcaaacccccc
attttaactggaaaattgcccacccccctataaagccttccttgaaaact
cggatccccccccttaaaaaagggggggttcatactatgtaattatgcat
ggctctgtcattgtttttatggctggactacataattattcaacaggacg
tcctctttgaaaaaggtCTATAGTTAGATCATCTGCAGAGGTGCCAACTC
GTTTCTTACCGTTGACCGTAGAATCGTCTAATGTCGACATGCGTCTTTTG
Ttatttcgacatagctgtaggctggtctttgaaataaaaaatcaaagata
aacaaatacataccaaagttatcaatcaatcactaaattgtactcttcct
atcacgtcacagattatTGATATGTAAGAAACGTGAAGTGggttttttcg
aaaagaaaacttcaacGATGTAagtcactaaaaaactaataagcATGCTT
TCAATTCAACGAAGAtacccaaatcaaaacaacattttcatACCAGGAGA
CTCCCACATGCCAACATTTTATCCTGCAGgaaaaaatttagccaaatctC
CCgctttttcaggattttctcctGCATcggatgagatggagtttttataa
tactttagtaattggtcatttgaagtaataaaaatgacgcattctttaga
aaaaaataactgGTTAAccaccaaccaaatcaaatacgagcttgtaaaaa
ctccacctCGTCCctcccgcatttccaaaaattttcagatttcctgaaaa
aaattcagaatttgaaatgatttcttgatatttcaacaaaaatatttgaa
agtttaAGCATTTCGagttttgaacaaaaaaattcaaaagcaagaaaaat
gaaaaattgaatggtAGCTTGGGTATATCTAGACTCAGtaatttcagtaa
aaaaaaactaCCTCAAcctacaaagtttctaaaattttagagcttTGTGC
AATACAACTAAAAAAGTCCGGTACAGTTTGAATGACAGACTGTTGGTGAA
ACCTTGTTGActgtgtttgaaaattttagaaacccaGGCATGCGCATAAT
Taaaccttaaaacctacaaactcaaaagacattcaaaactacttaaaaaa
tcaaaacatcagccataTTTATAAAAGCTCCCAGTCATTAATAGCCATTT
CGTTTAGAAGTGAatctgtgttttcattttcattagtttatctttttttg
caatgtcagctttttccataaattatgcgcgcacacagaaaaatattgaa
aaccccgcaaaaattctgctcagtgactgggctcaaatcaaccaatcaga
tgcactcacatatgcagggacagatatccctgcagacgagttagttGGAT
TCAATCGTAAAcaagagacaagattataaaggATTAGCCGGTGAAATGGT
TCCCACGGTCTGGATATTCAGGTTAAGTGAATAGTAGAACATTTTTTGGG
TCGACAATAAACTAGTAGCTATGAGACATTTGGTCGTACATGGAAATAAT
TTACTTGTTccagatttttttttgtatattttcgaGCCATAAAGATATCT
CAtaacaattaatatgacacagagagaaactttaataaacattgcaaatt
tagtgaaacacacacaagaactttctttctatagaagtggtacgactcaa
tactttttttcgggacaccctgtatttctTATCATCATTGTTTTGCAAaa
gcaaaaggtctattaatcTGCATACCCCGCATTACAAAGATATCTATTGT
TGAATTATCAAAATCTATCGAAGGCTTGAAGtatttgaaaagtttaaaga
aGTAGAATAGGACTAGGCtcttcaataaaaatatttttataccaattttt
ttACCATTATATTAATGAACCCTTACTCACAGTTAAAACCCCTAGATATC
CTCTTTAGTAAGGATGCTTAACTATCCGTTCTCAGATCAACTCCTGGATA
TTCAcaattgaacaatttttttaaagctgACCAATATCCTAAGTAGAAGG
GGGGTAGCCTTTCTAGAAAAGCTCATTGATTATACATTAAAGATCAGTTT
GAGTGGTAGAATGGTACCTTTGCTTGTGGTGCAGTGGCCGGGAAACCATC
CATGATCCATCCTGTTCCTTCTGCTAGATTCCTAAATAAATAGAAGAAGC
ATTGGAGGTGTGACTTTGCTTTTagagagaagagaagaagaagaagagaa
gtGAACCCTCTCAATGGGCCCTATCCCTGGATAGATACCTATCCTAGTAT
AGGGAAATAACCACGCTTACCAGACAGTGCTAATCTGCACTCGCGACACA
ACAGAGTTATTGGCGTACAGATGATTATACACGGGAGGACATACATCTTT
GCAGGTGTTGAACCAATGAGTATCGTCACCACATCACATGCAATGCCTGG
CATACTCCCCATAACCTtttatcagagtgatggtacccagTTCCCCTCTT
CCCCTTTGGCTTTAACCAAAACTGGGTGTATTTTGGAACAAGGCACACTG
CTAATATCTTTCTACAAAAACCTAACCATCATTTTAACTATTTTTGACAA
CCATACTATACAGACATAAAAGGAACatttaattaaagattttatattta
ttagattttattagattgtcttttgtgacttattttattggctaattttt
cacttttaacgGCCTTGTGTTTAGaaggaaatgaaaatttctgatcccca
tcttcttcaatttttcggaaggtgtcacccccccccttaagaaagggggg
gggcgAACTATCAGAAAGATGTTAGTATCATCATAGATAATTGTCataga
aatatataaaataagTATTATGCAGTAAATTGACTGCCAATAATTATATC
AAACATTTTGCCGAGAATATAATGTTcgttgtttctttttttatcgaaaT
ATGTTCAAGCAACcacttgaaatttcaaaacaacacCTTTGATCGTTTGA
CCTTCTTCCATATCTGTTGCTTTCCTGTATCCATCCAAAACTTCAGTCGG
TAAAATCTTGATCTTTCCCTCTCTTTCCAATCGTTCTGCATGTTCCATTT
CAGCAATCTTCATATAAATTTGACCAGTGCATACTACAACCAACtaattt
gaaaattcttctttttcaggGCTCACTAGTAAGCAAGTATCAAAATTGAA
GAATGCCAATTCCAATTATGTTGGATCAGCAGTGTTGatgccattttgtt
ttgtacaGAATGAGCTTTCAATTCTTTTTATCATAAGATCTTCATTTCAA
CCGTCTCATGCTGGGCAAGTAGGGTACGTATTTCTATACAAAGTTTCCTT
CTTTTTATCAAGGAAAGGTGGTGAGGTATGTGAGAATGGTCCCTTTTCTC
GCCCTTGAAAGTCTCTCACAAGGGTAGAAAAACCACAAAACAACAATTGA
ATCCCTGACAGGTTCCcataattatgaaaaatcatTTGATTACTTCCTtg
aagggtcataaattctcgTAATTTGGACCAAAGCTTAAAATCTTTAGCTG
AAAATTACAAATTAGGAAACTAGGCTCTCacagggtcgattttcgaactt
tcgcTCGGGCACATCCACCACTTCGCAAACCTAGTATACCCCCATCCCGG
TAATTCGTCACATTGAATATAGAACAGAATGGGGAATAAAAGATCAGAGT
ATTGTAGCCCGATAACAgatagccataattttcattcgAGCACATAAATC
TCTGCAACAAATGCATTATATtagtttcaaaaattgtttttgatgctagc
tattttattttaaaagaattacCTTCGctttttttacagatttccTGGAG
GAAGGCTAGATGCTGAAGACAGATCAGTAGAGGATGCTGTATTGCGAGAA
ACGTTCGAAGAAATTGGAATCCCTTCTCATGAGATTGAAATATGGAACAA
AGTAGTCTCCGaaaaaaaGgtctgttaatatttttatgatgttttttggg
gcacttcaaaacaaaatgaatagCCACACGTTGTTTTCATAAACAACTCT
aatggggtcgtttagcataatttaaaggaaaaaaataatatctagctgaa
actttctcCAGActgtctaaaaaaaaaaaacccctaAAATCCctggtgaa
aattttttttccccaGGCGCATTTTTAGAccatatcatgtataccattcg
aaagctctcaaaaatatatCGAAGACTTTCAAACGGTTTTAGACGATTTC
CCttcctaactcgagatatttcatgtgCAAGTTTCACTTTTCGCCATATT
TTGGTCTAAAACTGACCATAaattgcatcttctgcgtgTAAACATGTAtt
gtatgtttttattttctctttaattttagATTTCCAACTCGCCTATAGGA
ATCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCTCAACATTTG
TGAACGAGAGGTAAAAGTTTTTTCTACTTCACGATTCGCGTTCTCACTTG
attcattcatattttgaatattgataCGTTGACTCCAGTAATTCTTTTAA
GGTAACTATTTCTGAAAGTCATCctaaaaaatgtttaaacgGTCTTTTGA
AGACTTAATATCtttttgttagttttgtttgtttgtttatttgtttgttt
gtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgt
ttgtttgtttgtttgtttgtttgtttgttatttatCGTTGAAACTAAGaa
aaaaaTAGCTACTAGGTTGATACAAGTCAACCTATTCACAATTTATTTAG
TTCTTAAATAAAGCCATGAATATAACGTTGATTTCCAAtgcttatttttg
gacctacctccgggtaccccggtggaggtcctttaaattaacccatgtcc
gttcgttcgtccgttcgttcgtctgttgccagcttttctcgggattggct
cattagttttttctgattttttgcacaatgatgcaaaatggcaatgccca
aaatttttccggccgaaaatactgGAAATatCccggaaaaactgtttttt
tggcactttctcgagattttatcattagttttttctgattttttgctcaa
agatgcgtattaacaatgcccaaaacatggccgagtccattttttgagaa
aaaaaattttccggcccaaaatatgccggaaatcgccgtttttctggatt
ttcattggaatttttccttacaattggttgttttttcattcaaaaacatt
attaatagcaatgcccaccatcaagcatttttcaattttcaatgaaattg
atttttgaagctggaactattcaaaaatcgctggaacaacctattttcgc
cggaaagacagtatttcttgagtttctcgagctgtactttatattttttt
atgaaattttgcatactgatgcaaaatgacaatagctaaaatgtgacgga
gccagattttcgaaaaacatttttttccggctgaaaatgccgcttttctg
gattttcattagactttttgcttataattggttgttttttcattcaaaaa
aattattaatagcaatgcccaccaccatcaagtatgttccaattttcaat
taaattgatttttgaagccggaactattcaaaaatcacCGGAagagccta
ttttcgccggaaagacagtatttcttgaatttctcgagctgtactttaca
ctttttatgaaattttgcacattgatgcaaaatgacaataccttaaatgt
gacggagtctgattttcgaaaaacattattttctggccgaaaatgccgga
aatataccggagaaaccggtttttttgacattttatcgaattttcatcct
tatttttctctgatttttttgcagaatgatgcgtattcgcaatgctcaaa
acatgaccgagtttgatttttgagaaaatgtttttttccggccaaaaaaa
gccggaaatttccgtttttgcagattttcattggattttttcgtttcatg
tctttgtttttttcaaacaaaaacatcatttataagaatgtccacgatta
agcatggttcaattttcaatgaaactgattttggtacaggaactttctaa
aaattgccagaacagccgagaatcgccggattccatgaatttctcgTATT
Atactgcattttcatactattgttctcatttttcaattgtcttattacat
caatcttcaggtaggtaggtccattcagcatgtagctcgTTTTACTTTAA
ATCCTTCAAGATCATTAAGATGTCGAAGTTCTTGGACAGTGGTATTTCTC
TTTCAATGTTGTCAAATAATTTGATTTACTGCCTGGGTAGGCCTGAAAGT
GAAGCTTATATTGATGAAATGAGGTATTAATTCACTACTACATACTAATT
ATTTATACTTATTTAAAACCTTACTTGCTTTTGCAGGTGCACGATGTCTT
TACAGTCCCTATCAAGGATTTATTGGACCCTTCAAAACATGGATACACTA
AATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTAACCAGCACCGAAAT
GTATGGGGCTTGACGGCCATGTTCACCAATATTTTCCTAAGGTCGCTTTT
CCCTGAGACACATCGTTTATCAACGTTTAGATCACTTCAGAACATGGAAG
AAACTCATAGGTAG Coding sequence (CDS) from alignment at sc0000028_pilon:665029..673992+ >XLOC_040455 ID=XLOC_040455|Name=XLOC_040455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000028_pilon:665029..673992+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACAAGATTTATTCTAAAGAACTTCACTCAGatcttcaaaagatt
ttgtaGTAGAAGCTACCCAAATCAGTCTGCTGTCACAGTCACAGAAAGTG
AGATCCAAAAAAGACTAATTGACCCAGTTGGTCGAAAACAAACGTTCCAA
AATCTTCATGAAAaagATGAATACAAGATTTATTCTAAAGAACTTCACTC
AGatcttcaaaagattttgtaGTAGAAGCTACCCAAATCAGTCTGCTGTC
ACAGTCACAGAAAGTGAGATCCAAAAAAGACTAATTGACCCAGTTGGTCG
AAAACAAACGTTCCAAAATCTTCATGAAAaaggGCTCACTAGTAAGCAAG
TATCAAAATTGAAGAATGCCAATTCCAATTATGTTGGATCAGCAGTGTTG
atgccattttgttttgtacaGAATGAGCTTTCAATTCTTTTTATCATAAG
ATCTTCATTTCAACCGTCTCATGCTGGGCAAGTAGGgGCTCACTAGTAAG
CAAGTATCAAAATTGAAGAATGCCAATTCCAATTATGTTGGATCAGCAGT
GTTGatgccattttgttttgtacaGAATGAGCTTTCAATTCTTTTTATCA
TAAGATCTTCATTTCAACCGTCTCATGCTGGGCAAGTAGGatttccTGGA
GGAAGGCTAGATGCTGAAGACAGATCAGTAGAGGATGCTGTATTGCGAGA
AACGTTCGAAGAAATTGGAATCCCTTCTCATGAGATTGAAATATGGAACA
AAGTAGTCTCCGaaaaaaaGatttccTGGAGGAAGGCTAGATGCTGAAGA
CAGATCAGTAGAGGATGCTGTATTGCGAGAAACGTTCGAAGAAATTGGAA
TCCCTTCTCATGAGATTGAAATATGGAACAAAGTAGTCTCCGaaaaaaaG
ATTTCCAACTCGCCTATAGGAATCGTCTTTGGTTTTGTCAAAGATTTCAA
TCATGAAAAGCTCAACATTTGTGAACGAGAGATTTCCAACTCGCCTATAG
GAATCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCTCAACATT
TGTGAACGAGAGGTGCACGATGTCTTTACAGTCCCTATCAAGGATTTATT
GGACCCTTCAAAACATGGATACACTAAATTTCGCTGGGGAAATCAAATGC
CAGTATTTGTTAACCAGCACCGAAATGTATGGGGCTTGACGGCCATGTTC
ACCAATATTTTCCTAAGGTCGCTTTTCCCTGAGACACATCGTTTATCAAC
GTTTAGATCACTTCAGAACATGGAAGAAACTCATAGGTAGGTGCACGATG
TCTTTACAGTCCCTATCAAGGATTTATTGGACCCTTCAAAACATGGATAC
ACTAAATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTAACCAGCACCG
AAATGTATGGGGCTTGACGGCCATGTTCACCAATATTTTCCTAAGGTCGC
TTTTCCCTGAGACACATCGTTTATCAACGTTTAGATCACTTCAGAACATG
GAAGAAACTCATAGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:665029..673992 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-765:8737 |
| Aaloc | 457-537:6680 |
| Aaloc | 328-456:6141 |
| Aaloc | 175-324:5472 |
| Aaloc | 61-171:55 |
| Aaloc | 1-54:1 |
|
