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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:600407..604708- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040451 ID=XLOC_040451|Name=XLOC_040451|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4302bp|location=Sequence derived from alignment at sc0000028_pilon:600407..604708- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTGACATGGATGCTTACACTACAGTCCGTAATTTTCTCTACCAT
CATCTTACTGGAGACGAGTGGTGAATATTTCTCATCGAGCGGACATATGC
GTTATTTATTTGATATAGAGAAACAACTGGCTTCTCGTCTAAGAACCACC
ATTGAGCGGGAGGAGCGCCGAATAGCGGAGCTGAAGAAATTTTATAATAA
GATTGAACATATTGAGAAGAAAGAAGATGAAAGGAATTATATCGGACATC
CGAATAATGCGTTCAAAATCTTGAGAAGACTGCATCGTGATTGGCCTAAA
GTTCAGAAAGTAGCTGAACGGAACCACGAGGGTACAGTTTTGCACTTTCA
TTTCTATATTGTTCGCCTTAAAGACTTCTCTATCTGTTTTTTTTATCAAG
ATTTTCTAATCAGTTTGAATTTCCAGGACTTTTTAAAGCCTTGTTGCAAT
ACATGCTTAGCGTTCTACATCTGCAATTTGAGCTTTACTAAGCTCGTTTG
ACGTCAACCAAACGAGTGAAGACGTAGAGTTAGAGAGTCTATCACAATAG
TAGTGTTAAGGCCGAGGTAAACGATTCCAACATTTCATCCAACATCATCC
AACATGCCATTTTCTCGCTGTTGGATGGAATGTTGGGATCGTTTACACGA
ATGCAAAAATCCGATTGGAAGAAAAAAATATGTTGGAAGAAGGAAAAAAG
TGTTAGATGAAAGTTTGATCGCCATCAAACATTTTGTCCAACATTTACTT
CTTCTTTTCGTGTTGGATCATGTTGGATTCGTTTACTCAGCTCACATCCA
ACATTTGAAAGGGAATGACGTCATTAGAAATAAAATCGAATGTTTTTGGT
CAAAAATTCGAAAAATCTCGTAAGAAATTTATAAAGATGGTAGAGAAGCT
ACTAGATCGAATGTTTTTTTTCGGAAAATAAACCAAGAGGGAGGAGCACT
GAAATTAAGCGACCTGTCGTAGAGGGGTGACCCTTTAATAGTACGTTTTT
CAGGCTTCCCAAAATGCAGTGTAAGTGTGTAAAAAATGAGAACATTTTTG
TTGCAAAATTTTAGAAAATTTGACCATTTTTTGCCTTAAAATAGATAAAT
AAATTTCAAGAAATTGCACAATAAGAGTCGATTTTTCGCCAGAATTTTCT
CTGCATTGTAAGGGTCCAATTGTTAGACTATAATCTTTGTCCGCATGAAC
AGCAGTAGTGGCACTGGTTATACTGGGTACTGGATATAAAAATCCTCGCC
ATTTCTAATTTGAAAAGAATGAATTCAAAAAAGAATGAATGAACACCCAT
GTTGGATGAAAATGATGTTGGAAATTGCGACGAAACGATTTTAAGGAGAT
CCAACACCTTTCCGAAATTTATCCAACATTTGTCCAACATTTAAATTTCT
ATGTTGGATGAAATGTTGGAATCGTTTACCTCGGCCTTTAAGGCCAGGGC
AAACCGATCCAACATTTCATGCAACATGCCTTTTTTCTGATGTTGGATAA
AATGTCGGACCGGTTTGCGTCAATTCAAATTTTTGGAAAAAATGAAAATT
CAAAAAAAGAAGAAAAAAATCGTGTTGGACGGTGTTGGATAAAGTTTGAT
CGTCATCAAACATTTCATCCAACATTGGAAAATCATGTTGGATGAAATGT
TGGACTGGTTTGCTCTGGCCTTTAGTGCACATCCAGACAGGGTGCTAGAA
AAATATAGTGATAGACTCTCTACCTTCACCTCATTGCAATGTTGCAAACG
ACACTGAACTAACAGAGACATCGACTTTCCCTTTCTCCATCATAATCTCT
TCATCACTTGAAACAACTGTTAAGGGAGGTCCATAAAGTCAGCATGAAAC
CTTCATCTGTGACCTTTACCTTGGTATGAGACTTGTCAAACCTTCAGTCA
AATCAAATATCTCAAGATTAGATGGGCTTTCATTTATAAGAAAGGAGTAA
GATTTTTTTTTTCTAGACTCATGGTTGGGTCACTACAATTACATTATTCT
TTCCGATTCAGAGGTTTGCCTATCTATCTCATTTAAGACCTCTTTCTCGA
TTGAATAGAGTAGGTTAACTTGGAATCCTGCCTGTGGAGTCACTTTTTCT
TCCAGAATTTTCAGAGTTCTATGCACAATATGGCAATCTACTACCATCCG
CCGATGATGTCGACGGTGCCCGCGCGGCCTTGTTGCGGCTTCAGGAGACG
TTCGCATTGTCTGCAAGTCAAATATTGAATGGAATTGTCCCAGCTTCGAA
CGGGTTCACCAAACTATGTAAGATATCAATTTTCTTTTGCACTTCTTGCA
GTTTATACAATTTATGCTTTTTGACTGGCTTCAGTGTTCTTATTTAGACA
AGGCAAGAACCGTGGTGCAGTGGTAGAGCATACGGCTACGGTTCGGAAGG
TCGTGGGTTCTACTCCCAGCCGAGTCATATCAAAATAGTACTTGATGCCT
CTCTGCTTGATGCTCAGCAATAAAGAGAAGGATCAAGGGTAAGTAGAGAA
ATCCAGGGAGAAAGAGTGGTGCCCTCCCCTACCTTCGGGTAGATCGCTAT
CGAAAGAGGAGCCTTCGGGTCGCCTACGACTGCGGTCGCAGATTTACTTA
CTTACAGGCCAGGCAAAAGGTCCAAGGCACGAAAAAGATTACAATTCATC
GGTCTAAAAACGCGATTTGTCGCCATATTTACGCTAACCAAACACCGGGC
CTGCTAAGAACTTGCCGTCCTAGAATCTAGAATTCGCCGAAGCTATTTTT
TTCATTCAGCCAGCCTTCAAAAACAAAGCAAAACCTCCGCTGACTATATA
AAGAATTGTATGGCCAGTAGTAAAATAAAACCTGAAGTCAAACTCGTTCT
TTACTCGTCTTTCTTTAGCGGCATCAGACGCGTACGATATTGGGCGCATG
GCGTACACTGATAAAAGATATGATGTGACGATAGGTTGGATGAAAGAAGC
GCTAAAATTGGTGGATACAAGTAACCATGGAGATGATTTACCAAGCAAAG
TAAATATTCTGGACCATTTGGCATGGTCAGAGTATCAGGTATATTTTTTG
ATTTTTAGACGAATTGTTAAAGATGAAGCAAGACCTTATGGAAGCACTAC
ATAATGTTGGACAATTTCAAAAACAGAGGCTCTGAAGTTCTCAGTGACAT
ATTGCTGCCGTCGAGACAAAAGGTCCAATATCAAAATAAGTGTCTGTTTT
ACTTTTCTTAACTTAATTCAGCGATTGGTCCATTTCTCTCACTACAAGAA
ATAAAGCCAATCCTACAATTTTAAGTTAGAAAAGCAAACTCAGTTTTCTC
AGACAATTTTATTTTGATATTGGACCTTTTTTTTTGCCTCGACGGCAACG
ACATGGAGCTAATGTAACTCGAACACTCTAGGTAGAGAACACTCGACAAG
CACAGCGGGAACGCAAATTTTGTAGAGATTTCATTGTATTTTTTATATCT
TTAACTATCTAAAGCCCGCGAATTCTTTTTTACAGATTAACCGAATGAGT
GATGCGCTAAACCATACTAAACAATTATTGAAACTTGGTAAGATATCGAA
TTTACTGTTTTCACTCGATCTTGATTTCATTATTATACCCGCCCCTTACA
TGGGCGTTGATTTCATTTAAAAAATTAAGTCATCCAATAGATTCTTAAAA
TAGCCCTTCGTTTCATTGTTATACCCCTTTTTTATAGCAAAATATAGAGG
TCAATATTACATTGATTTCATTTGAGAAAATTAATGGATTCCTCAAAAAG
CCCTTCGGTTCGGGAAAGATTTTTAGAATATTAGAAATTTGGTCCTTCAT
TGAGGTTATACATAAAATGCCTTGACATAACATTAGTCGAACCTTATGAC
AGGCACGACGGCAGCTTTTTATATCTGGTGCGGCGAATGAGGAAATTTCA
GCGATTTTATAGCGATTTTACCGACGAAGAGGAAAATTTAGGGTTTTTTT
GTGAAAATCTGGTACGGCGGCCGCCGTACCTGCCGTACCCGTTGCGTCTT
GCCTGTATGAACGTTGGACGGTCATTGAAGCAATGTTATGAACATGTTGT
ACTAGTTGTAGCCTGTGGTTTCCTTCTTCACCTATAGACCCTGAGAACGA
TCGTATCCAACGTAACAAAGAAGCCTTTGAAAATTACCTCCTCGAGGGCG
TGGAGGCGGAGGGCGAGAAAAATCTTGAAGAAAGACTCGCACCTCATGAG
TTTCCTCACTTTTATTACACCCCTGATGAAAATGACTTCGAGCGGTATCA
CATTGAACGCAAATTGTGGCAAAAATTATGTCGTGGTGAAACAAAACCTG
TG Coding sequence (CDS) from alignment at sc0000028_pilon:600407..604708- >XLOC_040451 ID=XLOC_040451|Name=XLOC_040451|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000028_pilon:600407..604708- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTGACATGGATGCTTACACTACAGTCCGTAATTTTCTCTACCAT
CATCTTACTGGAGACGAGTGGTGAATATTTCTCATCGAGCGGACATATGC
GTTATTTATTTGATATAGAGAAACAACTGGCTTCTCGTCTAAGAACCACC
ATTGAGCGGGAGGAGCGCCGAATAGCGGAGCTGAAGAAATTTTATAATAA
GATTGAACATATTGAGAAGAAAGAAGATGAAAGGAATTATATCGGACATC
CGAATAATGCGTTCAAAATCTTGAGAAGACTGCATCGTGATTGGCCTAAA
GTTCAGAAAGTAGCTGAACGGAACCACGAGGATGAATTTGACATGGATGC
TTACACTACAGTCCGTAATTTTCTCTACCATCATCTTACTGGAGACGAGT
GGTGAATATTTCTCATCGAGCGGACATATGCGTTATTTATTTGATATAGA
GAAACAACTGGCTTCTCGTCTAAGAACCACCATTGAGCGGGAGGAGCGCC
GAATAGCGGAGCTGAAGAAATTTTATAATAAGATTGAACATATTGAGAAG
AAAGAAGATGAAAGGAATTATATCGGACATCCGAATAATGCGTTCAAAAT
CTTGAGAAGACTGCATCGTGATTGGCCTAAAGTTCAGAAAGTAGCTGAAC
GGAACCACGAGGAATTTTCAGAGTTCTATGCACAATATGGCAATCTACTA
CCATCCGCCGATGATGTCGACGGTGCCCGCGCGGCCTTGTTGCGGCTTCA
GGAGACGTTCGCATTGTCTGCAAGTCAAATATTGAATGGAATTGTCCCAG
CTTCGAACGGGTTCACCAAACTATAATTTTCAGAGTTCTATGCACAATAT
GGCAATCTACTACCATCCGCCGATGATGTCGACGGTGCCCGCGCGGCCTT
GTTGCGGCTTCAGGAGACGTTCGCATTGTCTGCAAGTCAAATATTGAATG
GAATTGTCCCAGCTTCGAACGGGTTCACCAAACTATCGGCATCAGACGCG
TACGATATTGGGCGCATGGCGTACACTGATAAAAGATATGATGTGACGAT
AGGTTGGATGAAAGAAGCGCTAAAATTGGTGGATACAAGTAACCATGGAG
ATGATTTACCAAGCAAAGTAAATATTCTGGACCATTTGGCATGGTCAGAG
TATCAGCGGCATCAGACGCGTACGATATTGGGCGCATGGCGTACACTGAT
AAAAGATATGATGTGACGATAGGTTGGATGAAAGAAGCGCTAAAATTGGT
GGATACAAGTAACCATGGAGATGATTTACCAAGCAAAGTAAATATTCTGG
ACCATTTGGCATGGTCAGAGTATCAGATTAACCGAATGAGTGATGCGCTA
AACCATACTAAACAATTATTGAAACTTGATTAACCGAATGAGTGATGCGC
TAAACCATACTAAACAATTATTGAAACTTGACCCTGAGAACGATCGTATC
CAACGTAACAAAGAAGCCTTTGAAAATTACCTCCTCGAGGGCGTGGAGGC
GGAGGGCGAGAAAAATCTTGAAGAAAGACTCGCACCTCATGAGTTTCCTC
ACTTTTATTACACCCCTGATGAAAATGACTTCGAGCGGTATCACATTGAA
CGCAAATTGTGGCAAAAATTATGTCGTGGTGAAACAAAACCTGTGACCCT
GAGAACGATCGTATCCAACGTAACAAAGAAGCCTTTGAAAATTACCTCCT
CGAGGGCGTGGAGGCGGAGGGCGAGAAAAATCTTGAAGAAAGACTCGCAC
CTCATGAGTTTCCTCACTTTTATTACACCCCTGATGAAAATGACTTCGAG
CGGTATCACATTGAACGCAAATTGTGGCAAAAATTATGTCGTGGTGAAAC
AAAACCTGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:600407..604708 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-930:214 |
| Aaloc | 664-714:818 |
| Aaloc | 496-663:1433 |
| Aaloc | 334-492:2196 |
| Aaloc | 1-330:4303 |
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