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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:733014..735080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040444 ID=XLOC_040444|Name=XLOC_040444|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2067bp|location=Sequence derived from alignment at sc0000028_pilon:733014..735080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATAAACTATTTTTGCTCAGTTTGGGCTTGCTTTGTGTCTTGCAGTT
GTCACTTGCAAAACACTGTACCAAAAGTTGTAGATACGTTAATTGTGGCA
AAGGAAAACATTGTGTTGTAGATAAGAAGAAATGTACAACTGCTTGTGTT
TGTAGTATCACGTGTGCCAATGTGTTTTGTGCATATGGAAATTGTCAACA
TAACCCAAAGACCTGTGAAACTAAGTGTGGTAAGTTTTTTAGTTCAACTT
CTTGAATTCATTTATCCATATTTGGCCCTTGTGATTTTTCCGCGCTTTAT
TCGCGTTCTCTCGTACAAAAAAACCAGCTACAATCTACTTTCGAATAAGC
CAAAGAAATTTAACTCCGGATTTTGTTATATTTAATCCTTAGTTTAATCT
CTCGTTACACTTCTGTCAATACAAAATAAACAAATCGAGTGAAGAAGTGA
TCGAGTCGAGCCGGTTGGTTATGCAGAACAAAAGTATATGTTTTTATCGA
ATATTAGACGTTATAAAAAAATGTGAATCCCTTTCTCATTCAGTATCCCA
ATTGAATCATCCCATAAATGAAACAATCAATCTCTTTCTTACAGTTTGTC
CAACAATCTGCACCAAAGAATACAAGCCAGTATGTGGATCTGATGGTAAA
ACCTATGGAAACGCCTGCGAATTGAATGTAGCAAGCTGTAAAAGCCAGGA
AAGCGGTGGTAAACCCATCTCCAAGAAAAGTGATGGCAAATGTCCTTGCC
AGAATCTTTGTCCAACAACTCTGTGTGGACCTCGAAGAAAATGCGTCTGG
AACCAGAAGACTTGCAAATCCTCATGTCATGTAGAAAAAGCTGTCGTGGA
GTACGATGCAAGAATAAGGCTAGATGCTTCCAAGATAAGAAAACTTGCAG
AAGATTCTGCAGTACGTATCTCTAATTTGAAAAAAAATACCATAAACAGT
AGGTCAAAACGTTAAGGGTTATAGACTATATTAAAACTCCAAGGAACTCT
TTTACATACTTAGAGTACTTTAAAATCCAATGCTCACACAAACATATACA
ACAATTAATAATGAATTTTGGTTCTTTTAAGGATGTTCGAGAGCTTGTCC
AAAAATTTACAGACCAGTGTGTGGATCAAACGGTGTAACCTACGCCAACC
AATGTCTCCTCAATTACGCCACTTGCCAAAGCAAAGGAAAGATCACCAAG
AAGAGAAACGGAAGATGTCCGTGCAAAAAGACTTGCCGCAATGTCCGATG
TGCAAATGGTGCCCGGTGCTTTCACAATCCACGAACCTGCAAAACTAAAT
GCGGTAAGGTTCTAATCAAAACTTTCCCTCGATTTCATGGAAATAGTTGG
CTTAGTTTTTTGGGAACATACGTATAACGAAATGATTTCAGCTTGTTGAA
AGCACATCGGCCTGTTTCAGAAAATGCCCGTACATGGGGATGGAGGATAT
ATATTGTCCGGGGGGTAGCGAAAAATCATCAAAATTTGCCTTTGTCCGGG
GTGTAAATTTGCTCTGTCCGGGGGGTCAACTGATGCTTGTCCGGCGGTAA
AACCCGTTATCCGGGGAGCCAAAAGTCACTTTTTCCTGGGGGTAAATCAC
TGAAAATCCTCCACCCGCATATTCAATTTTTTTCTGGAAAAGTCTATTTT
GACCCGGTGATATTTAGACAGTAAATATGAAGATTGTCATTATGGAAAGT
CGGTCATATGATTCAATTTTTCAGATATTATTCCAAGCTTTTAAGTAACC
AACATCTAGAACAAAAAGACTTTCCTTGGCGTATGGCTTTCTATTGGGCA
TTTGCAAGCATTTTTATGAATTCTGTTCATTCCCCTACAGCGTGTTCAAA
AGCTTGTCCCAAGATCTTGAAGCCAGTTTGCGGTACCGATGGAGTGACTT
ATGACAATGATTGCTTATTGAGATATGCCACGTGTAAGAGCAAAGGAAAA
ATCCAGAAAAAGAAAGATGGCAAATGTTGTTCAGTTGATTGCACCACAGC
TAAATGTTCCAAAGGCGCCAGATGTTTCCATGATCCTTTAAAATGTGTCA
CCAAATGCGGTGAGTAA Coding sequence (CDS) from alignment at sc0000028_pilon:733014..735080- >XLOC_040444 ID=XLOC_040444|Name=XLOC_040444|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1990bp|location=Sequence derived from alignment at sc0000028_pilon:733014..735080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATAAACTATTTTTGCTCAGTTTGGGCTTGCTTTGTGTCTTGCAGTT
GTCACTTGCAAAACACTGTACCAAAAGTTGTAGATACGTTAATTGTGGCA
AAGGAAAACATTGTGTTGTAGATAAGAAGAAATGTACAACTGCTTGTGTT
TGTAGTATCACGTGTGCCAATGTGTTTTGTGCATATGGAAATTGTCAACA
TAACCCAAAGACCTGTGAAACTAAGTGTGATGCATAAACTATTTTTGCTC
AGTTTGGGCTTGCTTTGTGTCTTGCAGTTGTCACTTGCAAAACACTGTAC
CAAAAGTTGTAGATACGTTAATTGTGGCAAAGGAAAACATTGTGTTGTAG
ATAAGAAGAAATGTACAACTGCTTGTGTTTGTAGTATCACGTGTGCCAAT
GTGTTTTGTGCATATGGAAATTGTCAACATAACCCAAAGACCTGTGAAAC
TAAGTGTGTTTGTCCAACAATCTGCACCAAAGAATACAAGCCAGTATGTG
GATCTGATGGTAAAACCTATGGAAACGCCTGCGAATTGAATGTAGCAAGC
TGTAAAAGCCAGGAAAGCGGTGGTAAACCCATCTCCAAGAAAAGTGATGG
CAAATGTCCTTGCCAGAATCTTTGTCCAACAACTCTGTGTGGACCTCGAA
GAAAATGCGTCTGGAACCAGAAGACTTGCAAATCCTCATGTCATGTAGAA
AAAGCTGTCGTGGAGTACGATGCAAGAATAAGGCTAGATGCTTCCAAGAT
AAGAAAACTTGCAGAAGATTCTGCATTTGTCCAACAATCTGCACCAAAGA
ATACAAGCCAGTATGTGGATCTGATGGTAAAACCTATGGAAACGCCTGCG
AATTGAATGTAGCAAGCTGTAAAAGCCAGGAAAGCGGTGGTAAACCCATC
TCCAAGAAAAGTGATGGCAAATGTCCTTGCCAGAATCTTTGTCCAACAAC
TCTGTGTGGACCTCGAAGAAAATGCGTCTGGAACCAGAAGACTTGCAAAT
CCTCATGTCATGTAGAAAAAGCTGTCGTGGAGTACGATGCAAGAATAAGG
CTAGATGCTTCCAAGATAAGAAAACTTGCAGAAGATTCTGCAGATGTTCG
AGAGCTTGTCCAAAAATTTACAGACCAGTGTGTGGATCAAACGGTGTAAC
CTACGCCAACCAATGTCTCCTCAATTACGCCACTTGCCAAAGCAAAGGAA
AGATCACCAAGAAGAGAAACGGAAGATGTCCGTGCAAAAAGACTTGCCGC
AATGTCCGATGTGCAAATGGTGCCCGGTGCTTTCACAATCCACGAACCTG
CAAAACTAAATGCGGATGTTCGAGAGCTTGTCCAAAAATTTACAGACCAG
TGTGTGGATCAAACGGTGTAACCTACGCCAACCAATGTCTCCTCAATTAC
GCCACTTGCCAAAGCAAAGGAAAGATCACCAAGAAGAGAAACGGAAGATG
TCCGTGCAAAAAGACTTGCCGCAATGTCCGATGTGCAAATGGTGCCCGGT
GCTTTCACAATCCACGAACCTGCAAAACTAAATGCGCGTGTTCAAAAGCT
TGTCCCAAGATCTTGAAGCCAGTTTGCGGTACCGATGGAGTGACTTATGA
CAATGATTGCTTATTGAGATATGCCACGTGTAAGAGCAAAGGAAAAATCC
AGAAAAAGAAAGATGGCAAATGTTGTTCAGTTGATTGCACCACAGCTAAA
TGTTCCAAAGGCGCCAGATGTTTCCATGATCCTTTAAAATGTGTCACCAA
ATGCGGTGAGTAACGTGTTCAAAAGCTTGTCCCAAGATCTTGAAGCCAGT
TTGCGGTACCGATGGAGTGACTTATGACAATGATTGCTTATTGAGATATG
CCACGTGTAAGAGCAAAGGAAAAATCCAGAAAAAGAAAGATGGCAAATGT
TGTTCAGTTGATTGCACCACAGCTAAATGTTCCAAAGGCGCCAGATGTTT
CCATGATCCTTTAAAATGTGTCACCAAATGCGGTGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:733014..735080 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-996:226 |
| Aaloc | 550-768:985 |
| Aaloc | 466-546:1239 |
| Aaloc | 232-462:1472 |
| Aaloc | 1-228:2068 |
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