XLOC_040443 (mRNA) -

Overview
NameXLOC_040443
Unique NameXLOC_040443
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000290_pilon:338784..339748+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040443 ID=XLOC_040443|Name=XLOC_040443|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=965bp|location=Sequence derived from alignment at sc0000290_pilon:338784..339748+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGGCAAACGTCTTGGACAAGCACTTGGAGATAAAGATGTTTTAGTTAT GGGTAACCATGGTTTACTGACCGTTGGTGAAACTATACCCATGGCGTACG ATAGACATTATTATTTTGAACGCGCGGCCGAAACTCAAGTACTGGCGTAT CAAACTGGAAAACCTCTAAGGtaagttttttgtttcaaaataacaaatac ATAGGTAGATTGAATAAAAACAGGCTGACATCAGACATCATCAGGGGGTC CGGAATGGAAAACGCCCGGGGAAAATATCTGCTAATatgaggtgtccgcc ttttaaaGTGTCCTTTAATTGATGATCTTATATTGTATAGGGCCAATCAA GTCTCAATATCTTGTTATGATGATGAAGATAATTGACCCTCAGTTTTCTA GATATATTTACCTTGACGATGGAATATTTTAAAGAATAACCTGGATAAAG CAACGCATATGAAACATAAAAATCCAAGAATTCCTCTTATACACCTCAAC CCTTAGCAGCGCGGTCGCGGGAATGAACCGGTAATGAACTTAAAAGGAAC ATTTAACGTTATAAGAAAGCCgcagctttcttatactatgatgcAAGGGT ATCTTATATTTTTCACAAGCACTCCTCATGTTTTTGATACCGTCGTCGAG AAAAGTTTACTTGTATTTTCGTTACCAGTCTCCTAAAAACATGACCGCAC TGGAGTTGATAAAGTGTATAATGAACAATTATCAAACTTAGTGACCGATC CAAAAACCAAAACACAGAACTTGATTTGAATTTATCATCTTCATTGCAGT TACCTACCGGACGACGTAGCCAAGCGGACAGAGGAAGGAATTTACGCTTA CGTCACAAAGGAAGTTGTCGCCAAACATTTGAACGCATTGAGAAATGTTT TCATGAAAGAAGATCCCACTTTTATTGACCCTAAGAATTCGGAATATATG GAGTACGTTGGTTGA

Coding sequence (CDS) from alignment at sc0000290_pilon:338784..339748+

>XLOC_040443 ID=XLOC_040443|Name=XLOC_040443|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=672bp|location=Sequence derived from alignment at sc0000290_pilon:338784..339748+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGGCAAACGTCTTGGACAAGCACTTGGAGATAAAGATGTTTTAGTTAT
GGGTAACCATGGTTTACTGACCGTTGGTGAAACTATACCCATGGCGTACG
ATAGACATTATTATTTTGAACGCGCGGCCGAAACTCAAGTACTGGCGTAT
CAAACTGGAAAACCTCTAAGGAAGGCAAACGTCTTGGACAAGCACTTGGA
GATAAAGATGTTTTAGTTATGGGTAACCATGGTTTACTGACCGTTGGTGA
AACTATACCCATGGCGTACGATAGACATTATTATTTTGAACGCGCGGCCG
AAACTCAAGTACTGGCGTATCAAACTGGAAAACCTCTAAGTTACCTACCG
GACGACGTAGCCAAGCGGACAGAGGAAGGAATTTACGCTTACGTCACAAA
GGAAGTTGTCGCCAAACATTTGAACGCATTGAGAAATGTTTTCATGAAAG
AAGATCCCACTTTTATTGACCCTAAGAATTCGGAATATATGGAGTACGTT
GGTTGATTACCTACCGGACGACGTAGCCAAGCGGACAGAGGAAGGAATTT
ACGCTTACGTCACAAAGGAAGTTGTCGCCAAACATTTGAACGCATTGAGA
AATGTTTTCATGAAAGAAGATCCCACTTTTATTGACCCTAAGAATTCGGA
ATATATGGAGTACGTTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040443XLOC_040443-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000290_pilongenomesc0000290_pilon:338784..339748 +
Properties
Property NameValue
Aaloc172-336:801
Aaloc1-168:1