XLOC_040440 (mRNA) -

Overview
NameXLOC_040440
Unique NameXLOC_040440
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000494_pilon:107953..108584-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040440 ID=XLOC_040440|Name=XLOC_040440|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=632bp|location=Sequence derived from alignment at sc0000494_pilon:107953..108584- (Clytia hemisphaerica_ch_hm2_pilon)
TCGTGCAATCGCTATTTCAATAATTTAAAGAGAGGCATCAAGGAGAAAGA AACCCTCACAGAAGAAGAATTGAAACTCAAAATTGTGAAAAATCGTCGAT ATGGTAGACGAAATAAGGTAAACATTAATATAACATTCCCTAATTGTTAA TTGCATACCAGGGTGATTATTTTCATTTTCCCAAGTATATTACTCAAAGT GTAGAAAGTGAATTAATGCAGTCAAAAGCAACGCTGAGTCTGCCATGTAG CTGTCCTCTTTGGGTAAACATTTTAACGGGTCAATTACTTATTTATTTTT TTTTTTCTCATAACTAGGAGGCAATACGTCGACAAAAGTTGGCTGCCGCT TTCTTTGACGACCTCGACGAAGAAGAAAAGGAGATGATAAATTCTATATC TGGAGATGTGATCACGGACGAGGATTCGGACGTCGACGACAAAAGCATAA AAACTCTCACCCGTCGAAAACTTACCTGGCGCAGTGAAAAGTTTGAAAAT CTTTTAAAACGGATCGAGCCGGAGCGGAGTGGCAAATTATTGTATCGTGT GGATGGTCCACCGTCGACGCGAGAGCCGTCGGAAAATTTACCACGCAACT TTATTCAGCCAATCGAAGAGACTGCCTCGTAA

Coding sequence (CDS) from alignment at sc0000494_pilon:107953..108584-

>XLOC_040440 ID=XLOC_040440|Name=XLOC_040440|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000494_pilon:107953..108584- (Clytia hemisphaerica_ch_hm2_pilon)
TCGTGCAATCGCTATTTCAATAATTTAAAGAGAGGCATCAAGGAGAAAGA
AACCCTCACAGAAGAAGAATTGAAACTCAAAATTGTGAAAAATCGTCGAT
ATGGTAGACGAAATAAGTCGTGCAATCGCTATTTCAATAATTTAAAGAGA
GGCATCAAGGAGAAAGAAACCCTCACAGAAGAAGAATTGAAACTCAAAAT
TGTGAAAAATCGTCGATATGGTAGACGAAATAAGGAGGCAATACGTCGAC
AAAAGTTGGCTGCCGCTTTCTTTGACGACCTCGACGAAGAAGAAAAGGAG
ATGATAAATTCTATATCTGGAGATGTGATCACGGACGAGGATTCGGACGT
CGACGACAAAAGCATAAAAACTCTCACCCGTCGAAAACTTACCTGGCGCA
GTGAAAAGTTTGAAAATCTTTTAAAACGGATCGAGCCGGAGCGGAGTGGC
AAATTATTGTATCGTGTGGATGGTCCACCGTCGACGCGAGAGCCGTCGGA
AAATTTACCACGCAACTTTATTCAGCCAATCGAAGAGACTGCCTCGTAAG
AGGCAATACGTCGACAAAAGTTGGCTGCCGCTTTCTTTGACGACCTCGAC
GAAGAAGAAAAGGAGATGATAAATTCTATATCTGGAGATGTGATCACGGA
CGAGGATTCGGACGTCGACGACAAAAGCATAAAAACTCTCACCCGTCGAA
AACTTACCTGGCGCAGTGAAAAGTTTGAAAATCTTTTAAAACGGATCGAG
CCGGAGCGGAGTGGCAAATTATTGTATCGTGTGGATGGTCCACCGTCGAC
GCGAGAGCCGTCGGAAAATTTACCACGCAACTTTATTCAGCCAATCGAAG
AGACTGCCTCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040440XLOC_040440-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000494_pilongenomesc0000494_pilon:107953..108584 -
Properties
Property NameValue
Aaloc118-432:316
Aaloc1-117:633