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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000281_pilon:380957..383068- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040418 ID=XLOC_040418|Name=XLOC_040418|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2112bp|location=Sequence derived from alignment at sc0000281_pilon:380957..383068- (Clytia hemisphaerica_ch_hm2_pilon)
ATTACCAGCGACGAGCGAGAAGAAACTATCGTTAAAGCACTGACCCTATA
CAAAGGAATACTACCGGAAGAAGCATTTTACAATAGTCCAACCGGGCCCG
ACATTTTTATGACAGACAATTGTGGTGAACTACGGAATAGTCTGCATAAG
ATATGGCCTGATTCAACTTTGCTTCTTTGCATTTTTCATATTCTCCAGCA
AGTCTGGAGATGGTTGTATGATAAAAATCATGGGGTATCTCAAAACGATA
GGGTTGAAATTATGAAGCTGTTTAAGAATGTCATTTACGCACTAAACTTG
GAGGAATTTGAAGAGACTTCAGTCCTGCTTCAGGAGTCGAATGTTACGTC
AAAATACGAACATTGCATTTCATACTTTGAAGAACTGTTTTCATTAAGCA
AAAGTTGGGCAAAATGTTTTCGTTCTGAAATTCTAATCCGTGGTTCACAC
ACCAATAACTATGTGGAATCTCAATTTCTCGTTATCAAGGATTCAATTTT
GAGACGACAACGTCAATTTAACATCAACATGTTGCTGGATAAATTGATGG
TTGAATTCGAGGACCACTATAAGAATCGCTTACTTTCAATTGCAGACAGT
ACATTCGATGGAGTATATAGTCAGCGGTTTAAGCAGATCAAATTAAAAAA
AGTGCCAGGTAAATTTTGCCTGCCTTAAATTATTGAGAAAAACAGCACTC
TTCTATGGCGTCCTCCAGGTTTTCAGGTCCCCCATCTGGGGCCTAATACT
CCCATTCGGTCTTTTCCAGCTATCCTTTTTCTGGGGCTCCCCCCTACTGG
AAGAATATTTTTGTAACCAACAGATTCGACCGTACAGCTTCCGATCCATA
ACAATTTTTGGATGATACTTTCCTCTTCAAAAGATTACTTATAGGGATTC
CTGTTTTTGTCATAAATTTACGAGGAGAGTCCTGTTTATCTCAAAAATTT
AATGGGAGCTGCTTTCTTTCTCAAAAGTACTTGCACCTGGTTTCTTTGAC
CTCATGTCCAACCTGGGTCCTGTTTTTACAGTACGCCTTCAAAAACAAAG
AAATGGTGTCCCGTCTGAATTATTAGCAATTAAGTGTAATTTAGAGACTG
TTAATTGAAAATTTAGAATGAAACATTTATATTGAAAATAAAAGCTAAAG
CTAACGATTTATTTTTCCAAAAATGGTCAAATTGTCACTTTTTTTTTCGA
AAATTGCAACTAATCAACTGTTTAACTCATTATTTTAAGTTTTGATCGGG
TCTTTAGTTTCCCATTGATTTTTTTTCATTCTCAGAATCTTACGATACCA
AAAGCAATGTCAAAGAGATAGCTTCTGATTTGTTCACCGTCAAAAGCAAA
AGTGATGAAAAGCTGGACTATGTAGTTGACATGTCCATTGGAGTGTGTGA
ATGTGTAGCAGGAAGAGATGGTTCACCTTGTTGGCACCAGTGCATATTAT
GGAAAGAAGGTTTTGCAAGGTCAGGGAATTTCTTACCGAAATTCGATAAA
TTTGAACGCAAAAGATTCGCTGAAATTGCATTAGGAGAGTCACTCGATAT
CTCATACTATGAATCCATTCATTCTGATATTAATATCCATGACCCTGAAA
TCTACAAATCTACGAATCTAGAATCTACCAATGATCAAAATATGAAGCAA
CCACGCAACATCGAAGAAGCTTTCGGAGATACTAACGATAATAAAACAGA
TTTAGCTTTGAATCACTTTGGACAGTTTTCTGAAGCAATGTTAGAAAAAA
TCCAACAAGGTAATAAGGAATTTAATGTAGCTGTCATCAAGTTCGTCAAA
CGTTTTGAAACTCTTAGTCAAAATCAAAGAGTTTCTTCATTACAGAGTTT
TGGTAGTACGTTCTATGGAAGGAAACGCTCAAAAATCAAAGTTCAACCAA
CGGCAGTTTCTAGAAGAAAGTCTGGCATCGGCAGCCGTCAAAAGCAAAGT
AATTCCAAGCACAGAAGTTTACCAAATCGACACGTGAATTTAAAGAGGAA
GCATAATATTACACGTGCTATAAATGAAAATGTACCTCCAGCCAAAAAAG
GTGGCGGTCGTTCGATGGTTAGCAACACTAAGCACTTTGTAAAGCAACCA
ATAAAGAATTAA Coding sequence (CDS) from alignment at sc0000281_pilon:380957..383068- >XLOC_040418 ID=XLOC_040418|Name=XLOC_040418|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000281_pilon:380957..383068- (Clytia hemisphaerica_ch_hm2_pilon)
ATTACCAGCGACGAGCGAGAAGAAACTATCGTTAAAGCACTGACCCTATA
CAAAGGAATACTACCGGAAGAAGCATTTTACAATAGTCCAACCGGGCCCG
ACATTTTTATGACAGACAATTGTGGTGAACTACGGAATAGTCTGCATAAG
ATATGGCCTGATTCAACTTTGCTTCTTTGCATTTTTCATATTCTCCAGCA
AGTCTGGAGATGGTTGTATGATAAAAATCATGGGGTATCTCAAAACGATA
GGGTTGAAATTATGAAGCTGTTTAAGAATGTCATTTACGCACTAAACTTG
GAGGAATTTGAAGAGACTTCAGTCCTGCTTCAGGAGTCGAATGTTACGTC
AAAATACGAACATTGCATTTCATACTTTGAAGAACTGTTTTCATTAAGCA
AAAGTTGGGCAAAATGTTTTCGTTCTGAAATTCTAATCCGTGGTTCACAC
ACCAATAACTATGTGGAATCTCAATTTCTCGTTATCAAGGATTCAATTTT
GAGACGACAACGTCAATTTAACATCAACATGTTGCTGGATAAATTGATGG
TTGAATTCGAGGACCACTATAAGAATCGCTTACTTTCAATTGCAGACAGT
ACATTCGATGGAGTATATAGTCAGCGGTTTAAGCAGATCAAATTAAAAAA
AGTGCCAGATTACCAGCGACGAGCGAGAAGAAACTATCGTTAAAGCACTG
ACCCTATACAAAGGAATACTACCGGAAGAAGCATTTTACAATAGTCCAAC
CGGGCCCGACATTTTTATGACAGACAATTGTGGTGAACTACGGAATAGTC
TGCATAAGATATGGCCTGATTCAACTTTGCTTCTTTGCATTTTTCATATT
CTCCAGCAAGTCTGGAGATGGTTGTATGATAAAAATCATGGGGTATCTCA
AAACGATAGGGTTGAAATTATGAAGCTGTTTAAGAATGTCATTTACGCAC
TAAACTTGGAGGAATTTGAAGAGACTTCAGTCCTGCTTCAGGAGTCGAAT
GTTACGTCAAAATACGAACATTGCATTTCATACTTTGAAGAACTGTTTTC
ATTAAGCAAAAGTTGGGCAAAATGTTTTCGTTCTGAAATTCTAATCCGTG
GTTCACACACCAATAACTATGTGGAATCTCAATTTCTCGTTATCAAGGAT
TCAATTTTGAGACGACAACGTCAATTTAACATCAACATGTTGCTGGATAA
ATTGATGGTTGAATTCGAGGACCACTATAAGAATCGCTTACTTTCAATTG
CAGACAGTACATTCGATGGAGTATATAGTCAGCGGTTTAAGCAGATCAAA
TTAAAAAAAGTGCCAGAATCTTACGATACCAAAAGCAATGTCAAAGAGAT
AGCTTCTGATTTGTTCACCGTCAAAAGCAAAAGTGATGAAAAGCTGGACT
ATGTAGTTGACATGTCCATTGGAGTGTGTGAATGTGTAGCAGGAAGAGAT
GGTTCACCTTGTTGGCACCAGTGCATATTATGGAAAGAAGGTTTTGCAAG
GTCAGGGAATTTCTTACCGAAATTCGATAAATTTGAACGCAAAAGATTCG
CTGAAATTGCATTAGGAGAGTCACTCGATATCTCATACTATGAATCCATT
CATTCTGATATTAATATCCATGACCCTGAAATCTACAAATCTACGAATCT
AGAATCTACCAATGATCAAAATATGAAGCAACCACGCAACATCGAAGAAG
CTTTCGGAGATACTAACGATAATAAAACAGATTTAGCTTTGAATCACTTT
GGACAGTTTTCTGAAGCAATGTTAGAAAAAATCCAACAAGGTAATAAGGA
ATTTAATGTAGCTGTCATCAAGTTCGTCAAACGTTTTGAAACTCTTAGTC
AAAATCAAAGAGTTTCTTCATTACAGAGTTTTGGTAGTACGTTCTATGGA
AGGAAACGCTCAAAAATCAAAGTTCAACCAACGGCAGTTTCTAGAAGAAA
GTCTGGCATCGGCAGCCGTCAAAAGCAAAGTAATTCCAAGCACAGAAGTT
TACCAAATCGACACGTGAATTTAAAGAGGAAGCATAATATTACACGTGCT
ATAAATGAAAATGTACCTCCAGCCAAAAAAGGTGGCGGTCGTTCGATGGT
TAGCAACACTAAGCACTTTGTAAAGCAACCAATAAAGAATTAAAATCTTA
CGATACCAAAAGCAATGTCAAAGAGATAGCTTCTGATTTGTTCACCGTCA
AAAGCAAAAGTGATGAAAAGCTGGACTATGTAGTTGACATGTCCATTGGA
GTGTGTGAATGTGTAGCAGGAAGAGATGGTTCACCTTGTTGGCACCAGTG
CATATTATGGAAAGAAGGTTTTGCAAGGTCAGGGAATTTCTTACCGAAAT
TCGATAAATTTGAACGCAAAAGATTCGCTGAAATTGCATTAGGAGAGTCA
CTCGATATCTCATACTATGAATCCATTCATTCTGATATTAATATCCATGA
CCCTGAAATCTACAAATCTACGAATCTAGAATCTACCAATGATCAAAATA
TGAAGCAACCACGCAACATCGAAGAAGCTTTCGGAGATACTAACGATAAT
AAAACAGATTTAGCTTTGAATCACTTTGGACAGTTTTCTGAAGCAATGTT
AGAAAAAATCCAACAAGGTAATAAGGAATTTAATGTAGCTGTCATCAAGT
TCGTCAAACGTTTTGAAACTCTTAGTCAAAATCAAAGAGTTTCTTCATTA
CAGAGTTTTGGTAGTACGTTCTATGGAAGGAAACGCTCAAAAATCAAAGT
TCAACCAACGGCAGTTTCTAGAAGAAAGTCTGGCATCGGCAGCCGTCAAA
AGCAAAGTAATTCCAAGCACAGAAGTTTACCAAATCGACACGTGAATTTA
AAGAGGAAGCATAATATTACACGTGCTATAAATGAAAATGTACCTCCAGC
CAAAAAAGGTGGCGGTCGTTCGATGGTTAGCAACACTAAGCACTTTGTAA
AGCAACCAATAAAGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000281_pilon | genome | sc0000281_pilon:380957..383068 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 661-1485:826 |
| Aaloc | 1-657:2113 |
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