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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:3117684..3118992- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040417 ID=XLOC_040417|Name=XLOC_040417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1309bp|location=Sequence derived from alignment at sc0000006_pilon:3117684..3118992- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAACAAAAGGATTATCGCATCATTCACACTCTCGCTTCACACC
GTTGTATCATCCATACTACCAAACACCTGTTTACAATAATATGAAGACTT
GCAGTGCTGGGTATATGGATACAACACCAATGCCGTTCAATAACTTCAGC
GCCAGTACCAGTTTCTACGAAAGTGAAAGTGAAGAGTCGTTCCCAGGTTC
ACCTTTCAGTAACACCGGTGAACAATCATTTGAAGGTGATCTCAGCACGA
TTGATTTCTCAGACTTGTTAAATATTCAAAAACATGAGCAGGATGACCAG
AACCAAACAAATCAGCTACAACAGATCTTGGAGCAAGTCAGTCGTGAGGC
GGCGCTACAACCACTTGACCCTGTCGATATTTCGTACTCTTACAACCTAA
GCCCAACACATACACCTCCATGCTTCCGCGCCGTCAGCCATGATTCTTAC
CCATCACCTAACTACCAGCCACGAGAAGAGCAACCGTACCCTTCGCCGAC
CTACAACCACCGTGAAGAGCCCTTCCAATCACCCAACTTTCACCAGATGC
AACCACCTGTTCCCTCGCCTCCATCCCCTCCTCGGAACATCAAAACATTC
GAAATTAAAGTGGAATCTGGTAAACCTGATCCACCTCAAAAACGAAGATC
AAACTCAGAAGATAGTAATGGTAGGTTGAATTTTTTATTTTCACTTTTTT
GATTTTCCTTTCACCGTTCGGACAGTTGCGTTTTTAATTTGCTCAAATTA
TAACATGCTTTATATAAACCTATTGTTTGTAAGAAAACTTATTGATATAT
GATGTTTGACTAATGATTAAACGAAGGTAATTAAGTAGAAAAAAATGGCA
TCTCTTTATAATCATCATCATTTTCGTTTCCAAAATGTGTTTTTTTGCTA
TTTTCTGTTGTGCTTGTGCTCGAAAAACTCCCACTGTTTTCAGAAATAGT
TGCTTTAGTTTCTATGTCACATTATATAACGTTGGCAATAATCATTGTTT
TGTTTGTCTTTCTCTTCAGATAAGATTCGACTTTACGAATTTGTCTTACA
ATTATTGAACGAAGAAAGAGCTGATTGCATCAGATGGTTGTGTCCAATCG
AAGGTGAATTCGAGATTACAAATTCTGCTAAAATCGCTCAACTGTGGGGT
GAGGTCAAGAAAAACCCGACTATGACATACGAAAAATTCGCACGAGCTTT
ACGACATTATTACAAACTGGGCATATTGATCAATTACAAACACAAAGAAA
AATTACGCTACAAATTCTCACAAGATATTCTTCAAAAGAACAAGCGGACT
GATGCTTAA Coding sequence (CDS) from alignment at sc0000006_pilon:3117684..3118992- >XLOC_040417 ID=XLOC_040417|Name=XLOC_040417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000006_pilon:3117684..3118992- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAACAAAAGGATTATCGCATCATTCACACTCTCGCTTCACACC
GTTGTATCATCCATACTACCAAACACCTGTTTACAATAATATGAAGACTT
GCAGTGCTGGGTATATGGATACAACACCAATGCCGTTCAATAACTTCAGC
GCCAGTACCAGTTTCTACGAAAGTGAAAGTGAAGAGTCGTTCCCAGGTTC
ACCTTTCAGTAACACCGGTGAACAATCATTTGAAGGTGATCTCAGCACGA
TTGATTTCTCAGACTTGTTAAATATTCAAAAACATGAGCAGGATGACCAG
AACCAAACAAATCAGCTACAACAGATCTTGGAGCAAGTCAGTCGTGAGGC
GGCGCTACAACCACTTGACCCTGTCGATATTTCGTACTCTTACAACCTAA
GCCCAACACATACACCTCCATGCTTCCGCGCCGTCAGCCATGATTCTTAC
CCATCACCTAACTACCAGCCACGAGAAGAGCAACCGTACCCTTCGCCGAC
CTACAACCACCGTGAAGAGCCCTTCCAATCACCCAACTTTCACCAGATGC
AACCACCTGTTCCCTCGCCTCCATCCCCTCCTCGGAACATCAAAACATTC
GAAATTAAAGTGGAATCTGGTAAACCTGATCCACCTCAAAAACGAAGATC
AAACTCAGAAGATAGTAATGATGATGAAAACAAAAGGATTATCGCATCAT
TCACACTCTCGCTTCACACCGTTGTATCATCCATACTACCAAACACCTGT
TTACAATAATATGAAGACTTGCAGTGCTGGGTATATGGATACAACACCAA
TGCCGTTCAATAACTTCAGCGCCAGTACCAGTTTCTACGAAAGTGAAAGT
GAAGAGTCGTTCCCAGGTTCACCTTTCAGTAACACCGGTGAACAATCATT
TGAAGGTGATCTCAGCACGATTGATTTCTCAGACTTGTTAAATATTCAAA
AACATGAGCAGGATGACCAGAACCAAACAAATCAGCTACAACAGATCTTG
GAGCAAGTCAGTCGTGAGGCGGCGCTACAACCACTTGACCCTGTCGATAT
TTCGTACTCTTACAACCTAAGCCCAACACATACACCTCCATGCTTCCGCG
CCGTCAGCCATGATTCTTACCCATCACCTAACTACCAGCCACGAGAAGAG
CAACCGTACCCTTCGCCGACCTACAACCACCGTGAAGAGCCCTTCCAATC
ACCCAACTTTCACCAGATGCAACCACCTGTTCCCTCGCCTCCATCCCCTC
CTCGGAACATCAAAACATTCGAAATTAAAGTGGAATCTGGTAAACCTGAT
CCACCTCAAAAACGAAGATCAAACTCAGAAGATAGTAATGATAAGATTCG
ACTTTACGAATTTGTCTTACAATTATTGAACGAAGAAAGAGCTGATTGCA
TCAGATGGTTGTGTCCAATCGAAGGTGAATTCGAGATTACAAATTCTGCT
AAAATCGCTCAACTGTGGGGTGAGGTCAAGAAAAACCCGACTATGACATA
CGAAAAATTCGCACGAGCTTTACGACATTATTACAAACTGGGCATATTGA
TCAATTACAAACACAAAGAAAAATTACGCTACAAATTCTCACAAGATATT
CTTCAAAAGAACAAGCGGACTGATGCTTAAATAAGATTCGACTTTACGAA
TTTGTCTTACAATTATTGAACGAAGAAAGAGCTGATTGCATCAGATGGTT
GTGTCCAATCGAAGGTGAATTCGAGATTACAAATTCTGCTAAAATCGCTC
AACTGTGGGGTGAGGTCAAGAAAAACCCGACTATGACATACGAAAAATTC
GCACGAGCTTTACGACATTATTACAAACTGGGCATATTGATCAATTACAA
ACACAAAGAAAAATTACGCTACAAATTCTCACAAGATATTCTTCAAAAGA
ACAAGCGGACTGATGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:3117684..3118992 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-957:289 |
| Aaloc | 349-666:959 |
| Aaloc | 1-348:1310 |
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