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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:3074944..3078319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040405 ID=XLOC_040405|Name=XLOC_040405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3376bp|location=Sequence derived from alignment at sc0000006_pilon:3074944..3078319+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTGGCCTTCACCTTACAACGGTATACCATCGTATTCACCAATGCC
GCCCAACTGCATTGGATTTCCATACCACCCTAGTGGCGTTAACGTTCATT
ATCCACTAGCTCCTAGTTGTGGAGGTAAgcaatcttttttgaaaaacctc
GTGCATTTTGTTGGTATATCAGAAATGAAACATGTTTTTAAAGCTTGCTG
GTTTCTAAACCATGATTCTTTGGTTTCACAATGCTTTAATTTAAGAACGa
taattttagtttaaattttaAGGGTTTAAATTATAggtcaaaattcaaat
tatgaaaatcGCCATACATATATTAGCTAGGGAGCCTTCAAAGGTTTAGA
CTTTCATTTAGATTCAAATTTAGCTGATTTAAAATCACGATAAAACTTTT
GGGAAACACATTTGAAGGTTGGAAAAGTCTGCAAGAGCTGACTGCTCAta
gattaaaaaataatatttgaaaattatatcCAATTTCTCAGCTCAGTAAC
ACAGGGTGTGCTTTAGTTTGAAACCTGACGAAAATTGCTTCAATAAGTTC
TCCAAATCTCTTGAAGCTCTGAGAAATGACAGTTTGACAAGACATACTTC
AAACTTGCAGAACATTGTTATCGACATTTTTTGGGATGGGGATACTTAAG
TGATCGACAGTGAAAGACTTCAGATGTGAAAGCAAACAAGAGCTTCGAAT
ACCTTAAAATACTATCTATTACTAACTGACATGCACAATAATTTACAGTG
ATATGAACTGTGACAATTTGAACAGGCATTCAAAACATTCACATACAGAT
TTTCCTCATTTTGGCCTATACTAAATATGCTTTAATTTAAGTGGTTTTGA
TCGAGTCTTTCGGGGTCAGCAACAAGCTTCTTTTATAGTACGTGTAAATC
AATTGTCTGAATCAagacatttttaaagaaattttaagagatcttcttga
aatttcaaattaatgtGCATTTCGAGAAAAATTGAATAGTAAAAaacaaa
ggcttcaaaatttgatgCTTTGTAAATGGCTTAAAATCTTACAAAAGACC
AGTTTACAAAATATCATAGCCAGAagctaaaaaaataaagttgatCAATG
GAGAAATGGGAGGGAAAGCAAAACGAGACACCTAAGAATCTATTTCCTCC
AGTTTGGAAGTCAATGTGGAAGTGAATAAAAACCAAATCCTGTTTTCTGG
CTACAAAGTTGgctaaaaaataacaaagctTCAAGTGTCAACTATATGTC
CAACCATTTTGATAAGATTTTCCATCCCTTTATACACATCACTTGATAAA
TTTACAGGAAATTTCGAGAAGTGTCAAATTATGAGCTTTGCCAAATAAGT
TTCTCTATCAATCACGATACTTTCGAGTTGCccacaaactttcaaaaatt
tatcttaACCCTTAGATTTACTTTGTCAGGAATATTAATTCTCGATGTAA
GAATAAGACAGCAGACAGAATTGTCAATAAAGTTTCCAATAAATTGTCAC
TGTTTATAAAGTTATTTTCCTTTGGGAGGGTTTAGGCTGATTTTCCGGCC
GAtagaacacccccttctcatagacccggtaggatttttttagccagtgg
gggtaaatatATTTAACAGACCAAAAcctgatggggattgatattcccat
gtattttatggctgggggtgtgaattccattgttttcgagtaAGAAAATT
CAgaggggatggaaaaaatagcattaTAAATTGCAGAGGATTTACttaaa
tgaatattttaagcgggaacaaaaatgaaattttgcactagggacgattt
tttggccaataTTTCAATGGGAAGGGGTTGcagtgggtttgtgagaaggg
gatgtgaTAAAAGTATATTATCGGGGTTGTATCCTTCGTAATGTTAATTT
GGGTGTAAAGCAAGaagcaaaaataatttctaaatTATAACAcaacccaa
ttttttttttagtgtTCCCAAGAAAGCAGCGACGGGAGCGGACCactttt
acaaaatctcaaCTGGAAATATTGGAAGACCTATTCGCTAAGACTCATTA
TCCAGACATATTTATGCGAGAAGAGGCTGCAAGGAAAATCAATCTTCCAG
AATCTAGAGTTCAAGTAAGCCTTAGAATTACGTAATTCTAAAAAACACAA
ATCTTTTAAATAGGGCAGTTGGATTCCAACTTTTGTCCTTCGTAGTGGAG
GCTAGAAATTCAAACATTTCACTTTCGGGGAAAGAACAGACTCGGTTAGG
TTGCTAATCTCTGAAAAGAAAGGTACGGAGCTATTTGCGAGAGTCGAAAT
GACGCGGAACAAACAGCTACCTTGCATAAACTTCCCGCGTCCgtgtttga
aaacaaaacatagGGCAATAATAAGGGATATTTTACTACGGACTCTTTGA
ATGCTAAAGTTTTTATCAATGATTTTAGTATAGTTTCAttaacaaaatat
ttgtttatgtttcggTAAAATGTCACTCTTTAATTTAATTCGTGAGCAAA
TCTTTCACATAAAAAGCGGTCTCGATTTCCTGGTCTTTGTCTAATAATCG
AGTCTGGCTGCATACGTCTGATAAGCAATGGACAAATTAAAGCAAACAAG
AGGAAACACGAGGAAAAGGGTTCACAGTGACATACCTTTTGACGAACGGA
ATATACACTTTGGCCCAATTTTCGAGCCCATAttgtttgaaacttttggt
GATTCATTGTTTTAAAATCCTTTTATGGTCTTTTGTAATACCACGCGTCT
TAGAGCTTGGAACTGGGCATCCTAGTACTTGGCAGTATAGGTCAAAacta
aacattttcatttttttcccaaaacagGTCTGGTTCAAAAATCGTCGAGC
AAAACACAGACAGAAGGCTAAACAAGACAAAGAGAAAACCTCGAAAAAGA
CTTCAAACTCAACTTCAAGCGACACCAGCGAACTCAGTAAGACAGGATCA
ATATCACCAGCACCATCAATCAGTCCAAAAGTCAGTAACATTGTCGCCTC
ACCACCAGAGAGCCCGAGCTACAAAACAACGATATCGACCCCATCATCCA
ACATGAACTCCATCTGGAGTCCTGCTAAAAACCCATCACCATACGAAGCA
CCACGTACCGTATCTCCTATCCTCAGCCCCTGTGCAGGAGGAGGGGGTAG
CAACCCTGGTAGTGGGGGTGGTTCCTCCTATAACCAAAGCAGCTCCTCTC
TATACACTCATACACCTTACAATATGTCACATACGAGGAACGACTACCCT
CAGTATGGTACCATGCCCTTTTCAACGTCGGTAGGAGGGCATAGTAATCA
TAACTCGAGTGATATAATGGACTTCCCAAACGAATATCATCCTCAACAGA
GTGCTCCTTGGTATTCCAGCATGTAA Coding sequence (CDS) from alignment at sc0000006_pilon:3074944..3078319+ >XLOC_040405 ID=XLOC_040405|Name=XLOC_040405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1650bp|location=Sequence derived from alignment at sc0000006_pilon:3074944..3078319+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTGGCCTTCACCTTACAACGGTATACCATCGTATTCACCAATGCC
GCCCAACTGCATTGGATTTCCATACCACCCTAGTGGCGTTAACGTTCATT
ATCCACTAGCTCCTAGTTGTGGAGATGGCTTGGCCTTCACCTTACAACGG
TATACCATCGTATTCACCAATGCCGCCCAACTGCATTGGATTTCCATACC
ACCCTAGTGGCGTTAACGTTCATTATCCACTAGCTCCTAGTTGTGGAGtg
tTCCCAAGAAAGCAGCGACGGGAGCGGACCacttttacaaaatctcaaCT
GGAAATATTGGAAGACCTATTCGCTAAGACTCATTATCCAGACATATTTA
TGCGAGAAGAGGCTGCAAGGAAAATCAATCTTCCAGAATCTAGAGTTCAA
tgtTCCCAAGAAAGCAGCGACGGGAGCGGACCacttttacaaaatctcaa
CTGGAAATATTGGAAGACCTATTCGCTAAGACTCATTATCCAGACATATT
TATGCGAGAAGAGGCTGCAAGGAAAATCAATCTTCCAGAATCTAGAGTTC
AAGTCTGGTTCAAAAATCGTCGAGCAAAACACAGACAGAAGGCTAAACAA
GACAAAGAGAAAACCTCGAAAAAGACTTCAAACTCAACTTCAAGCGACAC
CAGCGAACTCAGTAAGACAGGATCAATATCACCAGCACCATCAATCAGTC
CAAAAGTCAGTAACATTGTCGCCTCACCACCAGAGAGCCCGAGCTACAAA
ACAACGATATCGACCCCATCATCCAACATGAACTCCATCTGGAGTCCTGC
TAAAAACCCATCACCATACGAAGCACCACGTACCGTATCTCCTATCCTCA
GCCCCTGTGCAGGAGGAGGGGGTAGCAACCCTGGTAGTGGGGGTGGTTCC
TCCTATAACCAAAGCAGCTCCTCTCTATACACTCATACACCTTACAATAT
GTCACATACGAGGAACGACTACCCTCAGTATGGTACCATGCCCTTTTCAA
CGTCGGTAGGAGGGCATAGTAATCATAACTCGAGTGATATAATGGACTTC
CCAAACGAATATCATCCTCAACAGAGTGCTCCTTGGTATTCCAGCATGTA
AGTCTGGTTCAAAAATCGTCGAGCAAAACACAGACAGAAGGCTAAACAAG
ACAAAGAGAAAACCTCGAAAAAGACTTCAAACTCAACTTCAAGCGACACC
AGCGAACTCAGTAAGACAGGATCAATATCACCAGCACCATCAATCAGTCC
AAAAGTCAGTAACATTGTCGCCTCACCACCAGAGAGCCCGAGCTACAAAA
CAACGATATCGACCCCATCATCCAACATGAACTCCATCTGGAGTCCTGCT
AAAAACCCATCACCATACGAAGCACCACGTACCGTATCTCCTATCCTCAG
CCCCTGTGCAGGAGGAGGGGGTAGCAACCCTGGTAGTGGGGGTGGTTCCT
CCTATAACCAAAGCAGCTCCTCTCTATACACTCATACACCTTACAATATG
TCACATACGAGGAACGACTACCCTCAGTATGGTACCATGCCCTTTTCAAC
GTCGGTAGGAGGGCATAGTAATCATAACTCGAGTGATATAATGGACTTCC
CAAACGAATATCATCCTCAACAGAGTGCTCCTTGGTATTCCAGCATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:3074944..3078319 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 277-825:2828 |
| Aaloc | 127-276:1965 |
| Aaloc | 1-123:1 |
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