XLOC_040402 (mRNA) -

Overview
NameXLOC_040402
Unique NameXLOC_040402
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:2858720..2859617+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040402 ID=XLOC_040402|Name=XLOC_040402|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=898bp|location=Sequence derived from alignment at sc0000006_pilon:2858720..2859617+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCTATCACGTGACAAACATGTCAGTTGTCATGTTCACATATTTACTTAC TTTTATACAATTTCAGATACCGAAAGACAAATATACCAACAGTAAATATG CCAGTATAACAACATTCAAAGATTGTgtatacaaaagaaaaagagcCTTG AATACTGACTTGAAAAGAGACACACCTGGTGCTGAACTGTTCGCTACGGT GAACGCACCAGTAAGTTTAAGTTCACTCTCAATTAACAATCCTATTTACC GGTAAAGCTACTCTATTGGCTAATTTTCGGCAATTTGCCAATCCATACTT GGGTTGCTCGAGAAAGAAATTTCAGCCCCTATGTTGAGGATGTCTTTTTG AAAGGTCAAACCCCTGTAGAACCGTGTCGAAATTTTAGATACCACCCTAG ACCTtggattttatttcaaattttacagACGCGTGGATTTTTGTCTATTT CTAACACTCTTTGGAGAGGGCCAGATTATTCCTATTAAAAAATCGTTACT ATGCTTTTTCAACTCTAATGATAAGCATGCTATTCCAAACTTCATGTTTA ACTTTATGTACCACCGCAATGAGTTGAAGGGTATTAGCGTAACTGTCCTT TTGGGTTGTTTTCCTCGATATATCTGTAGTTTGTTGTAAGAATGGGGTTG AAAACATTACAAGGATGAATAACAAATCAtgtgaagaaaaaagaagcata atcttacaaaacttttttgaatttttccaggTTAACAAAACGATCATTGG AGCATCATGTGACGGTATGGCATCTTCCATACAACTCAAGGTGACCACGG ATCCACCACGATTCCAATGTCATTGTGTTGGTTATACTCTTGTTAAAGGT CTTACCATGGAATGTTTGCTGCATTACTGGTTATGCCCCAAGTATTGA

Coding sequence (CDS) from alignment at sc0000006_pilon:2858720..2859617+

>XLOC_040402 ID=XLOC_040402|Name=XLOC_040402|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000006_pilon:2858720..2859617+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCTATCACGTGACAAACATGTCAGTTGTCATGTTCACATATTTACTTAC
TTTTATACAATTTCAGATACCGAAAGACAAATATACCAACAGTAAATATG
CCAGTATAACAACATTCAAAGATTGTgtatacaaaagaaaaagagcCTTG
AATACTGACTTGAAAAGAGACACACCTGGTGCTGAACTGTTCGCTACGGT
GAACGCACCACTCTATCACGTGACAAACATGTCAGTTGTCATGTTCACAT
ATTTACTTACTTTTATACAATTTCAGATACCGAAAGACAAATATACCAAC
AGTAAATATGCCAGTATAACAACATTCAAAGATTGTgtatacaaaagaaa
aagagcCTTGAATACTGACTTGAAAAGAGACACACCTGGTGCTGAACTGT
TCGCTACGGTGAACGCACCAgTTAACAAAACGATCATTGGAGCATCATGT
GACGGTATGGCATCTTCCATACAACTCAAGGTGACCACGGATCCACCACG
ATTCCAATGTCATTGTGTTGGTTATACTCTTGTTAAAGGTCTTACCATGG
AATGTTTGCTGCATTACTGGTTATGCCCCAAGTATTGAgTTAACAAAACG
ATCATTGGAGCATCATGTGACGGTATGGCATCTTCCATACAACTCAAGGT
GACCACGGATCCACCACGATTCCAATGTCATTGTGTTGGTTATACTCTTG
TTAAAGGTCTTACCATGGAATGTTTGCTGCATTACTGGTTATGCCCCAAG
TATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040402XLOC_040402-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:2858720..2859617 +
Properties
Property NameValue
Aaloc211-378:731
Aaloc1-210:1