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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:796533..799503- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040393 ID=XLOC_040393|Name=XLOC_040393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2971bp|location=Sequence derived from alignment at sc0000059_pilon:796533..799503- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGAGGATGAAAGTGATGATGAAGGAAATGAAAACTTTGATCC
ATTTATTGACTTGAGAACTATAACTGAGCCTGAACCCTTGGCACCAGGGC
TAAATATATCTTTACAAAACTCGCTCCTTTTACATCTGACATTCGCTAAG
AGGCACAACCTCACAAAAGCTGCCTTAAAAGATTTACTTCATTTAACCAG
CCTACATTTGATAAGACCAAATAAGTTTCCTTCAAATCTTGCGAACATGT
ACTCAAGTATTGGTCTAAGTGAAGTTGGAGTTGCAAAAAAGTTTTATTGC
AAGAATTGTTATGGAATTTTGAATGAAGCTGATACACAATGTTCAAATTG
CCAATTTGTTGGAAAGGATTTTTTTATATTCAACGACATCGAAGAACAAT
TGAGAAAACAATTTCAAAGTACCTTTTTTTAATGTTTTAACATTATCTAA
AAGTTTCAATTATAGTTAATAGTTAATTGGATATCTTTTATTCTTACATA
CAGTAGCCGTTCATTGGTTCCTATTCAATTCTCTTTTTCTCAGAGTCAAG
TTTTAAAGACAACTTGTTTCAACCTCCGGCAAGAGTCCATAATAAAGATG
ATGCAATCAGAGACATTTACGATGGAAAGTTCTACAAGAAACTTGTCAAT
GAGGGATATTTCGAAAATGATGGAATAAACTTAACCTGTCAACTTAACAG
TGATGGTGTCAGTCTTTTTAAAAGCAGCACATATTCTGTTTGGCCAGTGT
ATCTCCGTATAAATGAGCTACCGCCCTATATGAGGTATTTTTAAATCTTT
TTAATTGACTTTGATTTCAAAGAAATATGTAACAGAATTATTTACCATGT
TTTATTATTTATTATGTTTACATTTTACAATAAGATCTTTGTAATATAAA
TACTGTACATCTCTTTAGAAATTGTAAGGAATTCAAACTCCTCCCATGCC
TCTGGTTTGGAAAGCAGAAACCGTATATGAGAACCTTTTTAAGACCTTTG
GTAGATGCAATGAAGACGTTATTTCATTCAGGTATGCTATATCTATATTT
CGCCTCATTCAACTATTGTCAATCAAAAAGGAGAACTTCTCAGCTCTTGA
TAAATCCATTTTCAGTCATTTTGTGATTCTCTCACATTGGATTAAAACAT
ATTTGACTTATGGCTCTTATTTCAAGAATACTTAAACTTTTAGGTATCAT
CATAAGGTTTGCTGATGGTACTAAAGTGAATGTGAGAATGGTCATTTCTG
GAGGGCTTTTTGATCTTCCTGGTATGTGATATTATTAATATGATTGATAT
GTTGTTTTAGAAAATAGTAAACTATGAGTTATTAATATTTTAAGACTTAG
AACATGTTTAAACTTTTATAATCATACAGGAAAATCTGATCGAGGCTCAA
TATGAAGCAAAGTTTCATTTTTAGGCTAAGCTAATGCTTATTTAAATGCT
TTACTTCAAACTTTAGTTTAAGGGGGCTCACAGTCACAAACAGCTTTATT
ATATAAAGTTCTAAAAAGAGTAAAAGTTATGTATACAGAAAAGCTACTCA
ATTTCATTCCATTTCAGCTTAGAGATACTGTATGCTAAGCATAGTCTCAG
CATGCTTAAGTCATGCTCTATAAAAAGGGAGAATTTGTCAAACTAACAAG
ATTCATGTAATAATTTCATGTTTAAATATTGTATAGCTTAGTTTTACAGG
CTTTTATGGTGTTAAAATTTTTGTTGTTGTTCCTTTTAGCTAAATGTCTT
GCGCAAGAAATGGTGCAGTTCAATGGTTATTTTGGTTGTAGTTTTTGTGA
GATAAAGGGTGAACAAGCAACATCAAATGGCAAGAAGAAAGGGTCAAAAA
CTGTGTTTCCCTTGAATAAAGATTGCATACCAAAATTAAGACAAGAAGAC
AGAACAATAGTTCAAGCTATACTTGCTCTGGAACGAAATAAAACAGTAAT
TCTTCAACCTATTAATCCTAAGAAGTTCATTTGTTTTTCTAAAAATAATT
TTTACAAACACTAAATTTCGTAAATATTTCATCTGTTACAAAACCTTTTA
AATTCTTCTCTTTTTTAAGATTTTCGGGATAAAAGGATGTTCTATTTTGG
CAGAGTTACCTTATTTGAACATCATCTGGAACTTTCCATTCGATTACATG
CATGGTGTGTTTTTGGGTGTCTCAAAGTAAGTTGAATATATTATTATGAC
CTAACTTAAGGAAGACTTTTATCCAGCATTGCCTAATGATGAGTGAACAC
GATTGCTGACTTATATGCTGTAAAGGGTAGACTAAAAGGTTTGCTCGCTA
AGCTACACCAGATGTGAGATATATTTTTAAAAGAAAATTTGCGAAACTTA
TCAGACTGAAATTCCAAAATTCTTTCAAAATTAATTTTCCCCTATTTTTG
AAATTCACAACAACAATATGTTTGATGTTACCCTTTTTTTCTTATTCTAG
AACTTTAGCAAACCTGTGGTTTGATTCATCAAACTCAAAAAATCCATGGT
ATCTTGGAGGGATGAGCAACATTGTTGAAAATCGACTCGTTGCAATAAAA
CCACCCGATGAAATTACAAGACTTCCTAGAAGTATTATCAATCACCGTGG
CTATTACAAAGGTATGGGCACTTAATTTCGGTACTTCTTGTTCTATTTTA
ATATGTATAATTTTTTAGAAATATTATTAAGAAAACATTACAATTTTAGC
TAACGAGTATCGCAACTGGTTATTCTTCTATGCACCTATTATCCTACAAG
ATGTTTTGCCAGAACCGTACTATAGGTATTTTGTTACTCATTCTTTTTTT
TTTCAATTCTGAGGGTTTTTGTTTAATCTTAAAATAATTGAAACTTAGAA
ATAGACCCGGTTTTCAGATTTTCAGAATTTTGCTCTATTTCATTCAAGCC
ATTTTCTTCTCCTATCAAACGCAATGTTCATTTTACAAGAGGAGGAGTTG
CCACCAACAAAAATTAGATGA Coding sequence (CDS) from alignment at sc0000059_pilon:796533..799503- >XLOC_040393 ID=XLOC_040393|Name=XLOC_040393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2946bp|location=Sequence derived from alignment at sc0000059_pilon:796533..799503- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGAGGATGAAAGTGATGATGAAGGAAATGAAAACTTTGATCC
ATTTATTGACTTGAGAACTATAACTGAGCCTGAACCCTTGGCACCAGGGC
TAAATATATCTTTACAAAACTCGCTCCTTTTACATCTGACATTCGCTAAG
AGGCACAACCTCACAAAAGCTGCCTTAAAAGATTTACTTCATTTAACCAG
CCTACATTTGATAAGACCAAATAAGTTTCCTTCAAATCTTGCGAACATGT
ACTCAAGTATTGGTCTAAGTGAAGTTGGAGTTGCAAAAAAGTTTTATTGC
AAGAATTGTTATGGAATTTTGAATGAAGCTGATACACAATGTTCAAATTG
CCAATTTGTTGGAAAGGATTTTTTTATATTCAACGACATCGAAGAACAAT
TGAGAAAACAATTTCAAAATGGATGAAGAGGATGAAAGTGATGATGAAGG
AAATGAAAACTTTGATCCATTTATTGACTTGAGAACTATAACTGAGCCTG
AACCCTTGGCACCAGGGCTAAATATATCTTTACAAAACTCGCTCCTTTTA
CATCTGACATTCGCTAAGAGGCACAACCTCACAAAAGCTGCCTTAAAAGA
TTTACTTCATTTAACCAGCCTACATTTGATAAGACCAAATAAGTTTCCTT
CAAATCTTGCGAACATGTACTCAAGTATTGGTCTAAGTGAAGTTGGAGTT
GCAAAAAAGTTTTATTGCAAGAATTGTTATGGAATTTTGAATGAAGCTGA
TACACAATGTTCAAATTGCCAATTTGTTGGAAAGGATTTTTTTATATTCA
ACGACATCGAAGAACAATTGAGAAAACAATTTCAAAAGTCAAGTTTTAAA
GACAACTTGTTTCAACCTCCGGCAAGAGTCCATAATAAAGATGATGCAAT
CAGAGACATTTACGATGGAAAGTTCTACAAGAAACTTGTCAATGAGGGAT
ATTTCGAAAATGATGGAATAAACTTAACCTGTCAACTTAACAGTGATGGT
GTCAGTCTTTTTAAAAGCAGCACATATTCTGTTTGGCCAGTGTATCTCCG
TATAAATGAGCTACCGCCCTATATGAGAGTCAAGTTTTAAAGACAACTTG
TTTCAACCTCCGGCAAGAGTCCATAATAAAGATGATGCAATCAGAGACAT
TTACGATGGAAAGTTCTACAAGAAACTTGTCAATGAGGGATATTTCGAAA
ATGATGGAATAAACTTAACCTGTCAACTTAACAGTGATGGTGTCAGTCTT
TTTAAAAGCAGCACATATTCTGTTTGGCCAGTGTATCTCCGTATAAATGA
GCTACCGCCCTATATGAGAAATTGTAAGGAATTCAAACTCCTCCCATGCC
TCTGGTTTGGAAAGCAGAAACCGTATATGAGAACCTTTTTAAGACCTTTG
GTAGATGCAATGAAGACGTTATTTCATTCAGAAATTGTAAGGAATTCAAA
CTCCTCCCATGCCTCTGGTTTGGAAAGCAGAAACCGTATATGAGAACCTT
TTTAAGACCTTTGGTAGATGCAATGAAGACGTTATTTCATTCAGGTATCA
TCATAAGGTTTGCTGATGGTACTAAAGTGAATGTGAGAATGGTCATTTCT
GGAGGGCTTTTTGATCTTCCTGGTATCATCATAAGGTTTGCTGATGGTAC
TAAAGTGAATGTGAGAATGGTCATTTCTGGAGGGCTTTTTGATCTTCCTG
CTAAATGTCTTGCGCAAGAAATGGTGCAGTTCAATGGTTATTTTGGTTGT
AGTTTTTGTGAGATAAAGGGTGAACAAGCAACATCAAATGGCAAGAAGAA
AGGGTCAAAAACTGTGTTTCCCTTGAATAAAGATTGCATACCAAAATTAA
GACAAGAAGACAGAACAATAGTTCAAGCTATACTTGCTCTGGAACGAAAT
AAAACACTAAATGTCTTGCGCAAGAAATGGTGCAGTTCAATGGTTATTTT
GGTTGTAGTTTTTGTGAGATAAAGGGTGAACAAGCAACATCAAATGGCAA
GAAGAAAGGGTCAAAAACTGTGTTTCCCTTGAATAAAGATTGCATACCAA
AATTAAGACAAGAAGACAGAACAATAGTTCAAGCTATACTTGCTCTGGAA
CGAAATAAAACAATTTTCGGGATAAAAGGATGTTCTATTTTGGCAGAGTT
ACCTTATTTGAACATCATCTGGAACTTTCCATTCGATTACATGCATGGTG
TGTTTTTGGGTGTCTCAAAATTTTCGGGATAAAAGGATGTTCTATTTTGG
CAGAGTTACCTTATTTGAACATCATCTGGAACTTTCCATTCGATTACATG
CATGGTGTGTTTTTGGGTGTCTCAAAAACTTTAGCAAACCTGTGGTTTGA
TTCATCAAACTCAAAAAATCCATGGTATCTTGGAGGGATGAGCAACATTG
TTGAAAATCGACTCGTTGCAATAAAACCACCCGATGAAATTACAAGACTT
CCTAGAAGTATTATCAATCACCGTGGCTATTACAAAGAACTTTAGCAAAC
CTGTGGTTTGATTCATCAAACTCAAAAAATCCATGGTATCTTGGAGGGAT
GAGCAACATTGTTGAAAATCGACTCGTTGCAATAAAACCACCCGATGAAA
TTACAAGACTTCCTAGAAGTATTATCAATCACCGTGGCTATTACAAAGCT
AACGAGTATCGCAACTGGTTATTCTTCTATGCACCTATTATCCTACAAGA
TGTTTTGCCAGAACCGTACTATAGCTAACGAGTATCGCAACTGGTTATTC
TTCTATGCACCTATTATCCTACAAGATGTTTTGCCAGAACCGTACTATAG
CCATTTTCTTCTCCTATCAAACGCAATGTTCATTTTACAAGAGGAGGAGT
TGCCACCAACAAAAATTAGATGACCATTTTCTTCTCCTATCAAACGCAAT
GTTCATTTTACAAGAGGAGGAGTTGCCACCAACAAAAATTAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:796533..799503 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1402-1473:73 |
| Aaloc | 1327-1398:271 |
| Aaloc | 1165-1323:521 |
| Aaloc | 1057-1161:903 |
| Aaloc | 853-1056:1231 |
| Aaloc | 775-849:1777 |
| Aaloc | 661-771:2053 |
| Aaloc | 421-657:2427 |
| Aaloc | 1-417:2972 |
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