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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:839486..845727- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040390 ID=XLOC_040390|Name=XLOC_040390|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6242bp|location=Sequence derived from alignment at sc0000059_pilon:839486..845727- (Clytia hemisphaerica_ch_hm2_pilon)
GTAATGGGTGACGTCAATGCTGTCCTGGCTCAAATGAGATCTTTCACACA
GGTAAATATTCCTGCTCCATAAATTTTTATCATAGAAATGACACATAGAG
ACAGGGACCTCTGACCTTTATATACCCTTGACCAAGCTATATCTGCCATC
TTTGATCTGGATGCGGGTTAATTTATAATTCAATGAAATTTTCCTTTATT
TTTTTTCCCACATTTAGTAGTGCTACCATCAGGGTACCACTTGCAAAAAA
CTCCGATCAAAGATTTTGGTTGGCCGGGATCGAAAAACAGTGTCCGGGGT
ATATAAAAGTCAGCGACAAGGACCCATTTTCAAAGATCTCAAACATTCCA
ACATTTTGGGTATTGGACACTTGAGTGTGTGACAGCAGAAAATCTTCAAA
CCAACTGATCATCCTTTTTATCTTCGTACATTATTATCTCCCTAATATTT
TAGGATGTGAGAAGTGGAACATGGAAAGGATATAGCGGAGAAGTGATCAC
AGACATTGTCAATATAGGGATTGGTGGCTCAGATCTGGTACAGCTTTTAC
TTTTTTTGTCTTATTAATAAGCGTTTCTAAGCGTTTCTAAGCTTCAAGGG
AAGAAATTTGTCTTTAATCATTTTTGTAGGTCTTCCTATAAAACTTCTTG
TGAGATTAGAGCACTCCCACTTTCAAGGATGTAGAGTAAATGGAGAAATC
CAGGGAGAAAAAGTGACGCCCTCCCCTACCTTTACTTTAGGTAGATAGCT
ATCGAAAGAGAAGCCTTCGGGTCGATCCGGACTGCGGCCGCAGACTTACT
TACTTACTTTGTGTTTTAGGGACCACTGATGGTGACTGAAGCTTTGAAAC
CTTTCGTGGACGGCCCTAAAGCTCACTTTGTCTCAAACATCGATGGTACC
CACATGGCAGAAACGCTAAAGAAATTGAAACCAGAAAGCACTTTGTTTAT
TGTGGCTTCAAAGGTTTGTGGTGTCATGTAGTTTTTGGACCTACCTCGGA
GGTGCTTTAAATTAACCTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCAT
TAGTTTTTTCTGATTTTTGGCACAAAGGTGCAAAATAATGATGCCCAAAA
TGTGACGGAGCCCGATTTTCGAGAAAAAAAAATTCCGGCAGAAATATGAC
TGAAAAACCTGAACTTTCTATTTCTATTTTTCCTTCCCTCACCCCCATCA
ACAATCAATGATGAAATTTAATGTGTTGTGCATTTTTGCTAAACCCTATA
TTTTCTGACTGATTGTTTTCATTTTTCTCCTTATTGTTATCTAACTTTCA
TCATCAGGTAGGTCCATTCAGCGTGTAGCTTGTTATATTATTGGCTATTA
TAGTGATCCATACAGTATGCCAAAATAAGAAAAATGAGTTAAAATTGCTT
GTCGCATGGCCACTTTCAGTTTTATTTATTTGATTCTTTTCCCTGCAAAT
TACATGAAATCAAAGCAAAAGCTACGCAAAAATCTAATTCGAAATCCGTG
TATTGTTTAAGGCAGTGCTGTGGGTCTAAATCTTAGTTTTAAAATTCTCA
CCCTCAGGCCAAACCATGGTTGGCCCTCGCTGTGCCACTAAACATCATAT
AATATCAAAATGCTTCCTACGGCACTGTGAAGATATCGTTAATAAGACTT
CCGATGGCTATATCTTGAGATGTTTTGGTTAGAAATTTGCTGACTGATGC
AAAAATGTTCCATAAATGTCAAACGATGAGTTTGAGATGATAATTTTCGA
AATTCTTATCTTTGCATCGTTAAAAAGAAGTGGAGGATATAAAATGGATA
AAGATAATAAAGAAAGTTATAATACAAACACTAATTAAAATCCCTTTAAT
AAGTCTCTCATTTTTTGTGTGGAATACTTCTGAAAACAAGATTCTTGATG
AACGCGTCGGCTGCGTTGTGCCAGGGGTCTGAGCCCCACAATCTGACGTC
ATGGAAAACACGAGGTGTGTTGTTGATGATGGAGAACCGCCGTATTCTGT
TAATCAAGGTAATGTATCGATATCTCTTATAATCGGTCTCGTAGATTTGG
GCGATCTGAACGTTAGTGTATTTGTTGAACGGGACATGGTTTGGTGTGTT
GAAACAATAATTATGGTTATTGTTGATGGCGTGGCAGATATGGAGCTTCC
GGGTGTTTGGGACGAACCAGATTGATGGAATACAGTAACCAAATGTTCCG
TGGCTCCCGCCGATAGTGGAGTGTAAAACGTTGGTCCAGTGGTTCTTGAT
ACTGCCCACGTGTTTGACGTCGAAAGACATATACCATTGCTTCTCAATGC
GCGGGATGAATCGAAGGAGCTTGCCTTTCGAAAGTTTGTAACCACCTGAA
ACGATGAGAAGAAATGGTTTTTTATATTAAGCGTCAAGGCTTTTTTTGTT
TGGAGCCCCTTGCCAAACATTCGATTTATTGACGTCACTTTAAACTTTCA
AATATCTTGCAGTAGAGAAAAATCAATTTGCATCAGAACACTTTAAGGCT
TCTTTTTTTTCAGAAAATAATCAAAGTGTAACTCGAAGATTTTCTTACCT
CCTGAGGTTGTTGTGACTTGAAGTTTACTGATGTCCGCTTGAGCTGGTGA
AAACCATGGATCGCCCTGGTAAACTCTAACATTGCGGAAAGTTCTTGGGC
TGGTGTTAACAACGTTCAGTTCTACTTTCTTATTAATGGTGACTGTAAAG
TAATTGGTGCAGCAGCCGACTACTTTCTGCTTGATATTAACTTCGGTGAA
TTTATTTATTAGTAAATCCTTACTGGTCCAATGATAATTATTGTTGGCGC
CGAGAGATGTTGCAATGAAAAGTTTATTTGAGTTTGGCCGGAACCAGACC
CCGGGGATTCGATCGCCATGAGATCCGTGATTCCTGCCTTTGGTGACGTG
AAGTATACTTTCCCACGTTTTGGCTTTTGCGTAGGGGCGGATACGAAAAG
ATACTTCGTACTCGGAAAAGTAGGTTGGAAATGTTTTGATGAGGGTGTTT
TTTCGGATGGGATGATTGGCTAAAAGGGAAATTTAAGTTAAGGTTAATAT
TTCTATCGAATATTTGTAATACATAGCATACCATTATCCAATTCATTCTG
ACCGTAGACAGCAGCCGTAACTGAAGCTTAGCAGCATTTGACTGCATCAA
ATCCAATTCCTATTCTGGTCTTACTAAGAGCTTTGGAAAGTTCTACTAGA
TGTCTCTTTGCTATAATTTAACAGTCAAATAAAAGAATTGAATGTGGCGC
CTACTCGTACCCGCGACACCCTTAACCATAGAATTATAAAGCCCGAAGGG
CTAGATGTCGTACTTTAGCTGAAAAGTGTGTCGTGGTTAGGTAGGAAATC
CTAACTAGGTCACGTGACATTACAATATAATTTCAGCGCTTGATCAATCT
GAAGCTTCGCGGGTTTTCGAAAACAATAGCAACAATAGCAACAATATTTT
TTCCGATATTCAATTTTTTTGCCTGCGATGGCTTAAAGTACGACATCTAG
CCCTTCGGGCTTTATAAATCAATGTCCTTAACCTCCCCCAAAGAAGAGTA
TCTATCCTTACTATATTGGCTATCACTGATGTAAAGACTTCTGATGTTTG
CTGGTGTGCTGCGTTGTACCATGGGTCTGCTTTGTACTTTGTGCTTGTAC
TTGTTTAATGTTCTGGAAAAATTCCGGAGTCTTGTTCTCCACGTTTGATA
TTTGTTTGCCGTTCACCCAAACTCGATACATATATCTCGTTGGAGTATTG
CTGGGATATTGGCTAATCGAGACATACGAATATTTGTGAAGAGGCAACGC
AGCACTGTTGAAACACCAGTTGTTACTGTTATATAAACCAGTACAAATAT
GAAGTTTTGAGGTATGTGGCTCGATAAAAACCGCTGGTACTCTACGGCCG
TGAGCTCCAGAGTTCCCACCAGTTGTAAAATGTATGATACTGGTCCAATG
GTTGACGATATAAAGTGGTTTGATTTGAAACGATATTGAATAAGCTGGTG
ACCAGGTCTCGAAAGCGTCGTGGATGAAATTTTTTCGAAGTGTATAACCT
ACAAGGAAATAGGAGAATATCCTTTTGAACGTTTTTTTTTCGCAAGTAAA
ACTATAAAAGGTATAAGTGCTTGAGCACGAGGAAACTGATTTTTCCTCAG
AGCTCCGATAATCAGTATTTTTGCATACTGAGCTCTATTGATTAAGGCCG
GACTCCACTTTCGCGCGAAATGGGCGACAGTTTTTTCTTAACCTTTTTTG
CCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGCGCGAACAAAAAAAAG
TTGAAGGAAGTTCTACTTTTTTCATCCGTTACGTCAATTTCTACCAATGG
AATTGCTTCATTTTGTAACCGACCAATGACCTTACAAAAACATCTAAAAG
TTTTCGCGCATGTCGCGCGAAAGTGGAGACCGGCCTTTATGACCAAACAC
CTATTAGCTCGCTGTAACTGTTTTCGACCCAGAAAAATACCGATAAGGCT
CTCAACTCACCAACTTGTGGATCGTTGTGAGTAAGTTTTTCATCTCTCTT
CTTTTCGTCATTTTCCGGTTTCCTCTCCTTTTCGTCTTCCTCTTCGTTCT
CCACGATTTCGTCTTCTTTTTTCTTTTCTTCGTTTGGAGTTGGAGCATCA
GCTGAAATTTAAAGTGTTCGCTTTTATTTAACTGCAATTTTTTCTTTCCA
CTACAGTATCACAGTTAACTCTCGTTAATTTGAACTCGAACAAGAAGTCT
AATGGCTGAATAACAGAAAGACTTGAATTACAGAGAGTATTCTACGAGGT
TTAGTTCGAATTATAGAAAGAATCGAATTATAGAAGCCTGCTGTATAAAA
ACAAATCCTTTTAGGTTAGAAACGTAAAACCTCAATATTAAATTGCCTTT
GTATGTTTTATATGATTTTCCATACCTTTTTGAATCAGTTCATCTTTATT
TTCCTTTGATTCTTCTGCCGGTTCGTCTTCTTCAGATTCTTTTTCAACCA
CATCAATTCGTCCTCTTTCTTTTCATCTGGTTGGTCTTAGTCTATATCCA
CCTCTTCTTTGTCATTGCTCAGCATAACATCTTCTTCTTCGTCGCTTTCA
ATCAATTTCTCGTCTTTTGCAACATCTTCCCCAAACGCTCTGGTTTGCCT
AAAAGTGGAATTCAAATACTTTTCAAAATCATCTTAAGTTTCTGTGATGG
AATGTTTTAGGCAGTATGGGTTTTAGAAACGTTGTTGATAATGGTATGGT
AATTAAAAAGGACACAGAGCAGATCATTTTGATTTGTATACAGCAAATTA
AAAATAAAACTGATATTTAGGTTTATACTTACAATTTGCGATTGCAATGA
AGCAAGCAGTGAGAAGAAAAATCTTGCAAAGGTTCATTCTTCTTGTTGGC
TTTTGTCTTCTTTATCTTTGGTTCAAGTCAAGAATGGAAATCCATATCGA
ACCCCCGCTATTTATACCCGTCAATTTCTTGTTCTCTTCAATTCATTTCG
ATCCATCCCCGATTAAAAAGTCATGAAAAGCTTTCGAAGGGGTTTTGGCA
CCGCCTTTACACATGCTTATGCTTACGTTGTTTATTCGGTAATTAAAAGG
AGGTTTACGCAGAAATGTGGTTCAATTAATCTTTTTTTATTTTATTTATT
TATTCTTTATTTAAAGTTGGGTAAAAACCTGCTAGAAAATACAAAAGTAA
ATTCTAATTAAGTCCAACTATCGTAAAAATATTATTTAAAAGCTATTAAA
ATAAAATCCTAAGAAAAAGAAAACGAAAAACTATTTACAATTTTTGCATG
TGCATTTTGAAAGTATATCGCTTTCGTTTAGAGCTTTAAGAAAAGAGTCA
AGATTTTCGTTTGATTTAACAGAAGATGGTAGTTTATTCCAAGAAGATAC
AGCTGCTTGTTGTTATTTTATTTTTATTTTATTTCCTTTCATCATCAAAT
ATTATTTTTTCTTTGTATAGACTTTTACCACAGTTGAAACAATCACAAAT
GCTAAATCCGCTCATTCATGGCTTTTGGAAGCCGCTAAATCT Coding sequence (CDS) from alignment at sc0000059_pilon:839486..845727- >XLOC_040390 ID=XLOC_040390|Name=XLOC_040390|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000059_pilon:839486..845727- (Clytia hemisphaerica_ch_hm2_pilon)
GTAATGGGTGACGTCAATGCTGTCCTGGCTCAAATGAGATCTTTCACACA
GGTAATGGGTGACGTCAATGCTGTCCTGGCTCAAATGAGATCTTTCACAC
AGGATGTGAGAAGTGGAACATGGAAAGGATATAGCGGAGAAGTGATCACA
GACATTGTCAATATAGGGATTGGTGGCTCAGATCTGGATGTGAGAAGTGG
AACATGGAAAGGATATAGCGGAGAAGTGATCACAGACATTGTCAATATAG
GGATTGGTGGCTCAGATCTGGGACCACTGATGGTGACTGAAGCTTTGAAA
CCTTTCGTGGACGGCCCTAAAGCTCACTTTGTCTCAAACATCGATGGTAC
CCACATGGCAGAAACGCTAAAGAAATTGAAACCAGAAAGCACTTTGTTTA
TTGTGGCTTCAAAGGGACCACTGATGGTGACTGAAGCTTTGAAACCTTTC
GTGGACGGCCCTAAAGCTCACTTTGTCTCAAACATCGATGGTACCCACAT
GGCAGAAACGCTAAAGAAATTGAAACCAGAAAGCACTTTGTTTATTGTGG
CTTCAAAGACTTTTACCACAGTTGAAACAATCACAAATGCTAAATCCGCT
CATTCATGGCTTTTGGAAGCCGCTAAATCTACTTTTACCACAGTTGAAAC
AATCACAAATGCTAAATCCGCTCATTCATGGCTTTTGGAAGCCGCTAAAT
CT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:839486..845727 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 280-351:73 |
| Aaloc | 136-279:5424 |
| Aaloc | 52-135:5790 |
| Aaloc | 1-51:6243 |
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