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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000123_pilon:642076..645648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040382 ID=XLOC_040382|Name=XLOC_040382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3573bp|location=Sequence derived from alignment at sc0000123_pilon:642076..645648+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTGACAACGTGACTGAGGACATCTGTGAGGATGACGAAGACGATGATGC
TCATCTACTCTTCGTGCCTTGGAAACGATCAGTATTTGACGAATTTAAAT
CCTGGCTCCAGTCACCTGATGGTGGTTTGAAAAAACCTCGTCAGGCTGAG
CAACATAAAAACCAAGCCACGGTCATATTGAAAGAGGCCAGCTCTgatca
atttgaaatgaaataccTATTTGATAGGAAGGCCATCAGGGACAAATGGT
TGGCTGAATTTGATCTCAATCGGGCACCTGGTACCGTAAAATCATATCTG
TATTCTCTTCGCTTTTTCTACAAATTTATTGAGACCGACCATCCAGAGTC
CCTGACACAATTTGAGTCAAAGTGTCAGGAGATGAAAAACTTAATGGACT
CCTGGATAACCGTGTACCGTAAGAAACAAAAAGAGCGGACTTGGAAGAAC
GAAGTCAAGCAAATTCAGGAAATGCTGACACCTGATGACATCTTGAAGTT
TGATCAATCTGCGCAGGTGAAGTCCACTCTGGCATCACTCTGCTCAAAAC
CAAGCAGCCTCTCGATGACGAATTTTGTCAATGCCAGGGATTATATCATT
ACGTCGATGTGTCTTGATAACGCGGCCAGAAGTGGAGCTTTGGCTAATAT
GACTCTGCACGAGTTCAAAAACGGATTGGTCGATGGTGATTCCTTCAATA
TCAGTGTTATTGACCATAAGACGTTAGATACTTCTGGTCCGTGTGTCATC
TCTTTGACGGCTGAGCTGTACAAATCGGCAAAAGTTTACATAAGGTACGT
TTTATCATACAACATGTCTAATTATTTTGGTGCATCCATTCAAATTAGGG
AAATTTCTGTAAACAATCGCGCCGAGAATATAATTATCTTTCTTATTTAC
TGAAAAGAATTGGTATTAGAGCGAGCTCCGCGAACCGTGACATATACCTT
GACACTCGAATGACACTGGAAAAACGGTGTTCTCGCGAGACCAATaaact
cttctcgagatgcataaaagCATTGCAAGCCTTGGGTGGTTTcacactga
aaatttcaagcttatGGGCTTAACGTGTTTaatcataaaaatgtttgttg
ataaaacaaagaaagtctagaaaagaaaagcatttttacTGCTTCTTGCT
GGAATGCACGTGAAGGGTTCAAGCGAAGGGTTCGAACAGCTTCAAATATT
GCTTTGTCGCTTTTAATAATAGATCTTCTTTGATTAAAAGTCATAATTCC
CATTGTCTTAAAGGTCCGGGGGCGtgctagggttgcgagctgacgggtat
gtaCCGCCCGACTTTCCATGGATGGGCCCTTAGAGGGActaaaaccgacc
cttagagggactgaAATCGAGGAAAAAACCgatttttcgtgaattttgtg
actctttttgggacttttttgcttaatatttagccttttCAGCGTCAAGA
AATTAGGTTTGGctgtttttacaacccttagggggactgaaattagattt
tgtgatttttacaacccttagcgGGATTTTGAAGgtccaaaaaggcaccc
ttaagggcggcacatacccgtacccttcacttgcctaagtacccctcccc
TGGGCTTAAAGGTAGGGTAGGGGTgccctttaaaacaaaagattttatta
aggaagcttAAACAAAAGATGCGTGCAATGAGCAAAGGTTTTGCGATTTA
AAACACAGATAATTCATCAACAAACGTAAGATgagttgaaaatcaaatta
acaGTTTTTCTATTAAATCACGTATAAGAAACAAATTTATCCTTATAAAT
GTTGGCTCTCGCaaaaaaaaCTTGAGTTTTAAAAGCGAAAttacaacaaa
tatttttaGGATTTCGAGTGATGAACGCGTAGGTATGAATATCAATATCG
ACCAATGATAAgcaaaataggaaaaattaataaaaaatcaaccaatgaga
agccttaagcaaaatcaattagtgtcttactagacggttcccgtcgtcgc
aaacgccggttaagtGCGTTGCTTACGCATGAAAAAGGATTAGATCTTAC
CTAAATATTTCGCTTAGACGAAAAGCCTCTTGACAAAATTCTTCTAAAAA
TGAGGCATCGGCACGCGTATCGAACGTGCGAACTATGGCTGTTAAAAATC
TTTCGAGctaaatgaatttaaaaattcGTCTAGGAACTTCGTCACTCGCT
GAATTTGTATTGCGGGAAAGCGCCCCCGGAAAGGTGTAGGtcaattttaa
gtaaaaattgcaaaatttttgccttttttacgCTGTCCCTTTTAACACCG
GTCcatattacgccacgagcccaaaataacgccaataaacCTGTCTAGAT
CTACCCATAGTAGAGGCCACTAGCCTCacttctcaaattttgatcttctg
aATATGAGGAACAATAATCAaccataaaatccctttgcacacgggaagct
ttttcgcgacatttTGGCCTTTACTGTTTACTACCACACcgttgtatcag
agtaatggtactcAATTCcactcacatggcatgggttgacctgggTGACG
GTGTATTCACTTGCAAAGTGAATAGTAGTGCCACGGCGAACGTCAAAGCC
TGTCCTCCAAGATGGGAATCAGGAAGCAGAGGGCGAaaaaatttactaaa
ttttAAAAGCAGTGGGGGCGAGCAGAGGTTTCCAAAAGGGTTGGTCGGGT
GACAGCaaagcaatattttttaagtctaGCACCGGTATATAATATCTTCT
ATACTTTATTTATAGGCATATGCGCAACAAACTTGATGGCGTAGACAAAT
CCAAAACCAGCCCAGTTTTTGTTTCCTGGAACGGAAACAAAATGAGCAGC
TCAATGGTAACTGGGCAAATTAAATCTTTTTGGACCAAATGTGTTGGGTT
GACGGAAAAGAAACCGACTTTCAACGCCACAAAAGTTCGAAAGTATGCAG
TAACGAAAACCTACGAAGAAAATCCGGGCATGAAAAAAGATTTGGCAATG
TTAATGTGCCATTCCGAAAAAACGGCAGCAAAGTCGTACTACTTACAAGA
GAAGAACAAAAATGCTGCCAAAACGTCGCAGACGTTACGCCAAATCATGC
GGAGCAACAACTCCTCAAAGGACGAGGAAGAGGTTTTGAAGGAGGCTTTT
CCCGATTGCTTTAAATTAGGTAAAGCAACACTTGCCTTGATAGATGAAAA
GGGACGAGAAAAACTAAATTCAACACTCCAAGAGCTAAGTGATATCCAGC
TGAGgaataaaataaactatatGCTCaaaaaatcggagaaagaaaaagaa
aatgtaagTGAAAGTGATGGTGACAGTGATTTTATACCGGAGGAAGAGGA
CGAGAAAGAAGCATCTATCAACATGAACCGAGCTGATTTTACTATCCAGG
AGAACAATCTggtaaacaaacattttaaagaTCTTATCGAAAGCAAAGTC
GTAATCAGAAGAAAGGAAGTTGGAGACCGATGTCAAAAATATTGCCCACA
ACTTTTGGAGAAGTATGGAGAATATAAAATAAGTGAGAAAGTTCGGAAGG
AGAGAAAAAAGTATCACAAGAAC Coding sequence (CDS) from alignment at sc0000123_pilon:642076..645648+ >XLOC_040382 ID=XLOC_040382|Name=XLOC_040382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3204bp|location=Sequence derived from alignment at sc0000123_pilon:642076..645648+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTGACAACGTGACTGAGGACATCTGTGAGGATGACGAAGACGATGATGC
TCATCTACTCTTCGTGCCTTGGAAACGATCAGTATTTGACGAATTTAAAT
CCTGGCTCCAGTCACCTGATGGTGGTTTGAAAAAACCTCGTCAGGCTGAG
CAACATAAAAACCAAGCCACGGTCATATTGAAAGAGGCCAGCTCTgatca
atttgaaatgaaataccTATTTGATAGGAAGGCCATCAGGGACAAATGGT
TGGCTGAATTTGATCTCAATCGGGCACCTGGTACCGTAAAATCATATCTG
TATTCTCTTCGCTTTTTCTACAAATTTATTGAGACCGACCATCCAGAGTC
CCTGACACAATTTGAGTCAAAGTGTCAGGAGATGAAAAACTTAATGGACT
CCTGGATAACCGTGTACCGTAAGAAACAAAAAGAGCGGACTTGGAAGAAC
GAAGTCAAGCAAATTCAGGAAATGCTGACACCTGATGACATCTTGAAGTT
TGATCAATCTGCGCAGGTGAAGTCCACTCTGGCATCACTCTGCTCAAAAC
CAAGCAGCCTCTCGATGACGAATTTTGTCAATGCCAGGGATTATATCATT
ACGTCGATGTGTCTTGATAACGCGGCCAGAAGTGGAGCTTTGGCTAATAT
GACTCTGCACGAGTTCAAAAACGGATTGGTCGATGGTGATTCCTTCAATA
TCAGTGTTATTGACCATAAGACGTTAGATACTTCTGGTCCGTGTGTCATC
TCTTTGACGGCTGAGCTGTACAAATCGGCAAAAGTTTACATAAGGCTGAC
AACGTGACTGAGGACATCTGTGAGGATGACGAAGACGATGATGCTCATCT
ACTCTTCGTGCCTTGGAAACGATCAGTATTTGACGAATTTAAATCCTGGC
TCCAGTCACCTGATGGTGGTTTGAAAAAACCTCGTCAGGCTGAGCAACAT
AAAAACCAAGCCACGGTCATATTGAAAGAGGCCAGCTCTgatcaatttga
aatgaaataccTATTTGATAGGAAGGCCATCAGGGACAAATGGTTGGCTG
AATTTGATCTCAATCGGGCACCTGGTACCGTAAAATCATATCTGTATTCT
CTTCGCTTTTTCTACAAATTTATTGAGACCGACCATCCAGAGTCCCTGAC
ACAATTTGAGTCAAAGTGTCAGGAGATGAAAAACTTAATGGACTCCTGGA
TAACCGTGTACCGTAAGAAACAAAAAGAGCGGACTTGGAAGAACGAAGTC
AAGCAAATTCAGGAAATGCTGACACCTGATGACATCTTGAAGTTTGATCA
ATCTGCGCAGGTGAAGTCCACTCTGGCATCACTCTGCTCAAAACCAAGCA
GCCTCTCGATGACGAATTTTGTCAATGCCAGGGATTATATCATTACGTCG
ATGTGTCTTGATAACGCGGCCAGAAGTGGAGCTTTGGCTAATATGACTCT
GCACGAGTTCAAAAACGGATTGGTCGATGGTGATTCCTTCAATATCAGTG
TTATTGACCATAAGACGTTAGATACTTCTGGTCCGTGTGTCATCTCTTTG
ACGGCTGAGCTGTACAAATCGGCAAAAGTTTACATAAGGCATATGCGCAA
CAAACTTGATGGCGTAGACAAATCCAAAACCAGCCCAGTTTTTGTTTCCT
GGAACGGAAACAAAATGAGCAGCTCAATGGTAACTGGGCAAATTAAATCT
TTTTGGACCAAATGTGTTGGGTTGACGGAAAAGAAACCGACTTTCAACGC
CACAAAAGTTCGAAAGTATGCAGTAACGAAAACCTACGAAGAAAATCCGG
GCATGAAAAAAGATTTGGCAATGTTAATGTGCCATTCCGAAAAAACGGCA
GCAAAGTCGTACTACTTACAAGAGAAGAACAAAAATGCTGCCAAAACGTC
GCAGACGTTACGCCAAATCATGCGGAGCAACAACTCCTCAAAGGACGAGG
AAGAGGTTTTGAAGGAGGCTTTTCCCGATTGCTTTAAATTAGGTAAAGCA
ACACTTGCCTTGATAGATGAAAAGGGACGAGAAAAACTAAATTCAACACT
CCAAGAGCTAAGTGATATCCAGCTGAGgaataaaataaactatatGCTCa
aaaaatcggagaaagaaaaagaaaatgtaagTGAAAGTGATGGTGACAGT
GATTTTATACCGGAGGAAGAGGACGAGAAAGAAGCATCTATCAACATGAA
CCGAGCTGATTTTACTATCCAGGAGAACAATCTggtaaacaaacatttta
aagaTCTTATCGAAAGCAAAGTCGTAATCAGAAGAAAGGAAGTTGGAGAC
CGATGTCAAAAATATTGCCCACAACTTTTGGAGAAGTATGGAGAATATAA
AATAAGTGAGAAAGTTCGGAAGGAGAGAAAAAAGTATCACAAGAACGCAT
ATGCGCAACAAACTTGATGGCGTAGACAAATCCAAAACCAGCCCAGTTTT
TGTTTCCTGGAACGGAAACAAAATGAGCAGCTCAATGGTAACTGGGCAAA
TTAAATCTTTTTGGACCAAATGTGTTGGGTTGACGGAAAAGAAACCGACT
TTCAACGCCACAAAAGTTCGAAAGTATGCAGTAACGAAAACCTACGAAGA
AAATCCGGGCATGAAAAAAGATTTGGCAATGTTAATGTGCCATTCCGAAA
AAACGGCAGCAAAGTCGTACTACTTACAAGAGAAGAACAAAAATGCTGCC
AAAACGTCGCAGACGTTACGCCAAATCATGCGGAGCAACAACTCCTCAAA
GGACGAGGAAGAGGTTTTGAAGGAGGCTTTTCCCGATTGCTTTAAATTAG
GTAAAGCAACACTTGCCTTGATAGATGAAAAGGGACGAGAAAAACTAAAT
TCAACACTCCAAGAGCTAAGTGATATCCAGCTGAGgaataaaataaacta
tatGCTCaaaaaatcggagaaagaaaaagaaaatgtaagTGAAAGTGATG
GTGACAGTGATTTTATACCGGAGGAAGAGGACGAGAAAGAAGCATCTATC
AACATGAACCGAGCTGATTTTACTATCCAGGAGAACAATCTggtaaacaa
acattttaaagaTCTTATCGAAAGCAAAGTCGTAATCAGAAGAAAGGAAG
TTGGAGACCGATGTCAAAAATATTGCCCACAACTTTTGGAGAAGTATGGA
GAATATAAAATAAGTGAGAAAGTTCGGAAGGAGAGAAAAAAGTATCACAA
GAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000123_pilon | genome | sc0000123_pilon:642076..645648 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2863-2955:3481 |
| Aaloc | 2812-2853:3439 |
| Aaloc | 2701-2805:3334 |
| Aaloc | 2656-2700:3286 |
| Aaloc | 2575-2655:3202 |
| Aaloc | 2497-2574:3121 |
| Aaloc | 2149-2496:2767 |
| Aaloc | 2047-2145:694 |
| Aaloc | 1870-2043:520 |
| Aaloc | 1342-1860:1 |
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