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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000173_pilon:215193..216263+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040380 ID=XLOC_040380|Name=XLOC_040380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1071bp|location=Sequence derived from alignment at sc0000173_pilon:215193..216263+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCATCCAGATCGTTAAGAAGGACATATACCGAAAGTAATGAGTT
TTGGATAGAGGAAACTATCAAGAAGTTAATTCCTTTTTGGTCCGAGGCGT
TCCTGGCGATGTCAAGTCAAAAGTCAGCAACTGCAGTGTATTCTTGCAAT
TTAATGAGCAGAGAACTGAGAACTGAATATGAAGCATACTGTGCCAAGTT
AGAAATCAAACGTCGAAATTGGGAGAGACAATATGATCTCCTGTACGAAA
AACGAAAGCGTGAATTGCAGCTACAAATCGAAAAACATGAAGCAAAATTG
GAAAGACTGGAGGAGGAGCTGAGAAAACGAAAATTGTTGAAGTCTCAAAG
GAAAACTAATCGCAATGGTAAGTCAGTCGCCAAGAATGAGTCGAGCGTCA
GTAGAGAGCCGTTGCATGTAGAGTCGTTTCATATTGATGATTCATTTGTC
GTTGAAAAGCCATCCTTCGTTAAAGAGTCTTTGATTGCTATAAGGTTGTT
CGTCAATGAAGATCTGTCACAAGTATTGTTCGAAGCAGAGCCAATAAATG
ATGTTCCCATAGTTTCGTCTCGCGTCGTTGTAGAGCCAATGCACACTGTC
ATCGTGGAGCCAATTCAAGTTTCTGTTATAGAGTCGATTCCCGTGGTTGA
AGAGCTGATTGAAGTTGTAGTCGAGCTGAAACGTGCAGTTATCGTCGAGC
CGTTGCACTCTATTGTCGTGGAACCAATCCGCATGGAATGTTTCAGCCTT
GTCATTGAATCAAACTTGTCATTTGTTAAAGAACCGTATTTTCCAGCTGG
TTTGGAGGTAACGCAACGTGAACCTGTTATCGAATTGAACGATTCCAAAA
TCCACGAATGTTCAATTGTTCATGATATGATTGAAAAGTTGTTATTGATA
CTTGTTTTGCAATTAGCCAATAAATGGAAAAGTGTTCAGATGAACTTTTA
TGGCCTTTGTGATTTGGATTTACGGTATGGAACATTGAGATTATTTGGTT
TTCTGATTTCCAGATTTTGGTCAAGCAATATGTCACTATACTTGACGGTG
GGGAGTGTAACTACCTTTTAG Coding sequence (CDS) from alignment at sc0000173_pilon:215193..216263+ >XLOC_040380 ID=XLOC_040380|Name=XLOC_040380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2142bp|location=Sequence derived from alignment at sc0000173_pilon:215193..216263+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCATCCAGATCGTTAAGAAGGACATATACCGAAAGTAATGAGTT
TTGGATAGAGGAAACTATCAAGAAGTTAATTCCTTTTTGGTCCGAGGCGT
TCCTGGCGATGTCAAGTCAAAAGTCAGCAACTGCAGTGTATTCTTGCAAT
TTAATGAGCAGAGAACTGAGAACTGAATATGAAGCATACTGTGCCAAGTT
AGAAATCAAACGTCGAAATTGGGAGAGACAATATGATCTCCTGTACGAAA
AACGAAAGCGTGAATTGCAGCTACAAATCGAAAAACATGAAGCAAAATTG
GAAAGACTGGAGGAGGAGCTGAGAAAACGAAAATTGTTGAAGTCTCAAAG
GAAAACTAATCGCAATGGTAAGTCAGTCGCCAAGAATGAGTCGAGCGTCA
GTAGAGAGCCGTTGCATGTAGAGTCGTTTCATATTGATGATTCATTTGTC
GTTGAAAAGCCATCCTTCGTTAAAGAGTCTTTGATTGCTATAAGGTTGTT
CGTCAATGAAGATCTGTCACAAGTATTGTTCGAAGCAGAGCCAATAAATG
ATGTTCCCATAGTTTCGTCTCGCGTCGTTGTAGAGCCAATGCACACTGTC
ATCGTGGAGCCAATTCAAGTTTCTGTTATAGAGTCGATTCCCGTGGTTGA
AGAGCTGATTGAAGTTGTAGTCGAGCTGAAACGTGCAGTTATCGTCGAGC
CGTTGCACTCTATTGTCGTGGAACCAATCCGCATGGAATGTTTCAGCCTT
GTCATTGAATCAAACTTGTCATTTGTTAAAGAACCGTATTTTCCAGCTGG
TTTGGAGGTAACGCAACGTGAACCTGTTATCGAATTGAACGATTCCAAAA
TCCACGAATGTTCAATTGTTCATGATATGATTGAAAAGTTGTTATTGATA
CTTGTTTTGCAATTAGCCAATAAATGGAAAAGTGTTCAGATGAACTTTTA
TGGCCTTTGTGATTTGGATTTACGGTATGGAACATTGAGATTATTTGGTT
TTCTGATTTCCAGATTTTGGTCAAGCAATATGTCACTATACTTGACGGTG
GGGAGTGTAACTACCTTTTAGATGGATTCATCCAGATCGTTAAGAAGGAC
ATATACCGAAAGTAATGAGTTTTGGATAGAGGAAACTATCAAGAAGTTAA
TTCCTTTTTGGTCCGAGGCGTTCCTGGCGATGTCAAGTCAAAAGTCAGCA
ACTGCAGTGTATTCTTGCAATTTAATGAGCAGAGAACTGAGAACTGAATA
TGAAGCATACTGTGCCAAGTTAGAAATCAAACGTCGAAATTGGGAGAGAC
AATATGATCTCCTGTACGAAAAACGAAAGCGTGAATTGCAGCTACAAATC
GAAAAACATGAAGCAAAATTGGAAAGACTGGAGGAGGAGCTGAGAAAACG
AAAATTGTTGAAGTCTCAAAGGAAAACTAATCGCAATGGTAAGTCAGTCG
CCAAGAATGAGTCGAGCGTCAGTAGAGAGCCGTTGCATGTAGAGTCGTTT
CATATTGATGATTCATTTGTCGTTGAAAAGCCATCCTTCGTTAAAGAGTC
TTTGATTGCTATAAGGTTGTTCGTCAATGAAGATCTGTCACAAGTATTGT
TCGAAGCAGAGCCAATAAATGATGTTCCCATAGTTTCGTCTCGCGTCGTT
GTAGAGCCAATGCACACTGTCATCGTGGAGCCAATTCAAGTTTCTGTTAT
AGAGTCGATTCCCGTGGTTGAAGAGCTGATTGAAGTTGTAGTCGAGCTGA
AACGTGCAGTTATCGTCGAGCCGTTGCACTCTATTGTCGTGGAACCAATC
CGCATGGAATGTTTCAGCCTTGTCATTGAATCAAACTTGTCATTTGTTAA
AGAACCGTATTTTCCAGCTGGTTTGGAGGTAACGCAACGTGAACCTGTTA
TCGAATTGAACGATTCCAAAATCCACGAATGTTCAATTGTTCATGATATG
ATTGAAAAGTTGTTATTGATACTTGTTTTGCAATTAGCCAATAAATGGAA
AAGTGTTCAGATGAACTTTTATGGCCTTTGTGATTTGGATTTACGGTATG
GAACATTGAGATTATTTGGTTTTCTGATTTCCAGATTTTGGTCAAGCAAT
ATGTCACTATACTTGACGGTGGGGAGTGTAACTACCTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000173_pilon | genome | sc0000173_pilon:215193..216263 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1071:1 |
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