XLOC_040379 (mRNA) -

Overview
NameXLOC_040379
Unique NameXLOC_040379
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000173_pilon:166905..167384+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040379 ID=XLOC_040379|Name=XLOC_040379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=480bp|location=Sequence derived from alignment at sc0000173_pilon:166905..167384+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGaaaaaaaaCTCaacaaaggtattttattggcAAATATGCGTACTGG AAACGATTTCAATTTCGATGAATACTCCAACATGCACGATGCCGAACCAA AATTCCCATTGAAGCGATTTTTACGTCCCGTCAGTACAATATCCGAAGCA TTGACAAACAAGCCATTATGGTCAAGAGTTACGCTGAAGGTAAAAGTAAT TGACATAGATCCTGTCATTTCTCACAACAACTTACGTATCATGTCGTGTC AAGTGATTGACACAAGTGTCAATGATCCAAAGCAGCTCACATTCTTTGAT AAATTAGTAAATGTCGAAACTGTCAAGTTGAGTAAATGTTATGAAGTGAC AGAAATTACCGTGTCAAAATTTAGTGGGCGTAGGGTATTCAAAGCCTCAG ATCAAACTGTGATCACGACACTCGCCGACACCGAAATCAACATTGTTTCT CAATCTTCAGCTTATGAATCAATAACAGGA

Coding sequence (CDS) from alignment at sc0000173_pilon:166905..167384+

>XLOC_040379 ID=XLOC_040379|Name=XLOC_040379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=960bp|location=Sequence derived from alignment at sc0000173_pilon:166905..167384+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGaaaaaaaaCTCaacaaaggtattttattggcAAATATGCGTACTGG
AAACGATTTCAATTTCGATGAATACTCCAACATGCACGATGCCGAACCAA
AATTCCCATTGAAGCGATTTTTACGTCCCGTCAGTACAATATCCGAAGCA
TTGACAAACAAGCCATTATGGTCAAGAGTTACGCTGAAGGTAAAAGTAAT
TGACATAGATCCTGTCATTTCTCACAACAACTTACGTATCATGTCGTGTC
AAGTGATTGACACAAGTGTCAATGATCCAAAGCAGCTCACATTCTTTGAT
AAATTAGTAAATGTCGAAACTGTCAAGTTGAGTAAATGTTATGAAGTGAC
AGAAATTACCGTGTCAAAATTTAGTGGGCGTAGGGTATTCAAAGCCTCAG
ATCAAACTGTGATCACGACACTCGCCGACACCGAAATCAACATTGTTTCT
CAATCTTCAGCTTATGAATCAATAACAGGAATGGaaaaaaaaCTCaacaa
aggtattttattggcAAATATGCGTACTGGAAACGATTTCAATTTCGATG
AATACTCCAACATGCACGATGCCGAACCAAAATTCCCATTGAAGCGATTT
TTACGTCCCGTCAGTACAATATCCGAAGCATTGACAAACAAGCCATTATG
GTCAAGAGTTACGCTGAAGGTAAAAGTAATTGACATAGATCCTGTCATTT
CTCACAACAACTTACGTATCATGTCGTGTCAAGTGATTGACACAAGTGTC
AATGATCCAAAGCAGCTCACATTCTTTGATAAATTAGTAAATGTCGAAAC
TGTCAAGTTGAGTAAATGTTATGAAGTGACAGAAATTACCGTGTCAAAAT
TTAGTGGGCGTAGGGTATTCAAAGCCTCAGATCAAACTGTGATCACGACA
CTCGCCGACACCGAAATCAACATTGTTTCTCAATCTTCAGCTTATGAATC
AATAACAGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040379XLOC_040379-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000173_pilongenomesc0000173_pilon:166905..167384 +
Properties
Property NameValue
Aaloc391-471:400
Aaloc1-390:1