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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:29608..32121+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040373 ID=XLOC_040373|Name=XLOC_040373|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2514bp|location=Sequence derived from alignment at sc0000372_pilon:29608..32121+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatgggaTGTCATCTTCATCGTCATGTTATACGTTGAATTTGATTCG
TTCAAACGAGGTGACTGATAACCTGGATAAGTATGTCGTGTTGACGTTCA
TTTTGACGTTGTTGTTGAGTGTAGTGGTAGTTATGGCGCTGGTCAAATAT
ATCACATACAACATGCAACTTGATGTCGAACGACAGAGAAAGATCGCCAA
CAGAAAAGTGTTACCAGTTCGCCTTGgtgatgaagaaaatgaaggtAGTG
AATCGGACAGTGAAGAACTTTTCGATGAAGAATGGAACAATAGTGGAATT
GAGCGAGATGACAACGAAGTAGAAGAAGGGGAGACATGTAGCATTGCAAG
TACTCTACAAACCAATTATGTTGAAGCTGAACATGTTTCTCTGGATCACA
AAGACGAATTATCTGATCACAAAATAATCGATCTGGATGTCAGTTGGTTG
ATCTCCTCATTGAACCTACCCCAATCTTTCATCTCACCACAACATCCCTC
TGTAATCACTCAATTGTTTTCTAACCAACAACATTCTATTGTAGTCTCCA
ACTTGGTGCAACACGAACAACTACTCTACCAGTTGGCCATTATACGGAAA
TTAGGATCTCTACAGCTGATCAACTTTACTATCGATGTGTTGTTACATCA
ACGCGTTTTACATCAAGAACTTGCGTTGCAAATGAGAGCAAAGTATGAAC
AACAATTTGATAGTTTTGACTGTGAACAAACTGAAAGTCTTTTTTCGGCC
AGCAAACAGATAACACTCGTTCTTCAAAACTTCATCAAAGATTTACAAAT
GTTATCGGTAGAGCGTAAAGTTTTAGAAGAATTgatttctttgttgtttt
ctCATCCTTTGAGTTGCTTGAAGATCTTCTTGTTGGCTCTACCAGACCAT
TGTTGTGTGAAAGATGGAGAGACAACCATCTCATCCATCGCTTTCGTTGA
ACGTCTTTTGTTCGCTATCAAAGGAAGGTATCTTGTCTTTAAAAACGCTG
TCAATAATGCcaacaaaacaacaaatgaAGTGCTCGCCTCCTTTGATCAG
AACATGATACAAATTCTTCAACATTTCCAAAAAGAGTTTCATAAAATAAT
ACgaactcaaattttcaaaatcaatccGCAACATTTAGAAATGCAGTTAG
AGAAGAACGTGAACACATTGAAAGTTGATCTACTGAACTCTGCTGGCAAT
GTTTCTAAAAAGCTGACGAACTTCAGCGACTCTTTGATGGGACTTCTAAT
ATCGCACCTCGAAAACCACGCAGTCTCGGTGAACCAATCAAAAGTAcagc
aagttgataaaatgaaaaacttgtTGACAGAACTCCAACAAAGGACAATA
AGTGAAATACAGAAGGTGGAAGAAGCATGTTTGAACACCCTTCAACATGA
TTGCGGCTTTTCTGACCAACAAATTGAACAAGTGGTCGGTGAGACGAGAA
ATTCTTTAAAAGAGTTGATTCATGGTTATAGCAATTCTATGAAATCGAGT
GAAAAGTCTTTTCTTGCAAGACGAGAAAGGACCGCCAAACTGACCAACTT
CTGTATCGATTATTTGGTCAAGTTGGTTTCTTCCCGATACAGAACGGTTC
TATCATCGAACATATCTTTCGTTAAATCGTTTCCCTCGCTATCGGATGGT
GTTCGATCGAAACTGGAGACGTCGATTCGAGGGAAGATGGGGATGGTTTC
TTTTGATGTCGTTCTCGCTATCATTAAACACACGCTTGTGGAAATGCAAA
ACGTCAAACACAATTTCCTTCTTCGTATACCTTCATCCTCTTTCGATATG
ATGTCTAATCGAACGGAAGTGATCAACTTGTCAGTTTTGAAACATCTCGA
AAGTGATTTTGAGCTCCCTCATACTTTGCTGGATGCTTTACACGAGAAAT
GTCACTTGATGATCAACCAAGCGTTTCAACATCTTCAACAAAACCTTCAA
CAAGTTGTGCAACAGGAAGTCACCAAGTCAACAAATTTCATCTTCAACGA
AAATCAAGTCATCTTTCGAACGTTTCATGAGAAGTCACGTGTCTCTAAAG
TGAACAAGAAGAAGAATGCACAATATTTATCGCGCAAAGGAAGTTCTTCC
AAAGAGAAAGCCATAGGAGGGAAATTGTTGGACCTTTACCGTGGTGCGAT
TGAAGTACGAGATCACCGCTACCAAGAAAAAGTGCAAGAGATTGAAGAGG
AGCATGATGGAAGTAAAAGCACCAAGAAAGGAAGAGGGAAGTGCGTTCGG
TGCTTCGACCAACAACAAGAACTTTTACAACGCAAAGCGATGGAagatca
aaaattttccgccttctttaaactAGATCAGTATTATATGAGAGAAATGC
TGTTAAAGAAAATGACCAACATAGATGGGAAAACGACCGACTTTGAATCA
CCTCATGATGAAGACGACAGGAAATCGATGGCCAAGAAAACTAAAAGTCC
CAAAAAGCTTTCTGCAAAAATACCTACACGGAGAAAAAGTCGTCGTGTTA
GTGATATGACGTGA Coding sequence (CDS) from alignment at sc0000372_pilon:29608..32121+ >XLOC_040373 ID=XLOC_040373|Name=XLOC_040373|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5028bp|location=Sequence derived from alignment at sc0000372_pilon:29608..32121+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatgggaTGTCATCTTCATCGTCATGTTATACGTTGAATTTGATTCG
TTCAAACGAGGTGACTGATAACCTGGATAAGTATGTCGTGTTGACGTTCA
TTTTGACGTTGTTGTTGAGTGTAGTGGTAGTTATGGCGCTGGTCAAATAT
ATCACATACAACATGCAACTTGATGTCGAACGACAGAGAAAGATCGCCAA
CAGAAAAGTGTTACCAGTTCGCCTTGgtgatgaagaaaatgaaggtAGTG
AATCGGACAGTGAAGAACTTTTCGATGAAGAATGGAACAATAGTGGAATT
GAGCGAGATGACAACGAAGTAGAAGAAGGGGAGACATGTAGCATTGCAAG
TACTCTACAAACCAATTATGTTGAAGCTGAACATGTTTCTCTGGATCACA
AAGACGAATTATCTGATCACAAAATAATCGATCTGGATGTCAGTTGGTTG
ATCTCCTCATTGAACCTACCCCAATCTTTCATCTCACCACAACATCCCTC
TGTAATCACTCAATTGTTTTCTAACCAACAACATTCTATTGTAGTCTCCA
ACTTGGTGCAACACGAACAACTACTCTACCAGTTGGCCATTATACGGAAA
TTAGGATCTCTACAGCTGATCAACTTTACTATCGATGTGTTGTTACATCA
ACGCGTTTTACATCAAGAACTTGCGTTGCAAATGAGAGCAAAGTATGAAC
AACAATTTGATAGTTTTGACTGTGAACAAACTGAAAGTCTTTTTTCGGCC
AGCAAACAGATAACACTCGTTCTTCAAAACTTCATCAAAGATTTACAAAT
GTTATCGGTAGAGCGTAAAGTTTTAGAAGAATTgatttctttgttgtttt
ctCATCCTTTGAGTTGCTTGAAGATCTTCTTGTTGGCTCTACCAGACCAT
TGTTGTGTGAAAGATGGAGAGACAACCATCTCATCCATCGCTTTCGTTGA
ACGTCTTTTGTTCGCTATCAAAGGAAGGTATCTTGTCTTTAAAAACGCTG
TCAATAATGCcaacaaaacaacaaatgaAGTGCTCGCCTCCTTTGATCAG
AACATGATACAAATTCTTCAACATTTCCAAAAAGAGTTTCATAAAATAAT
ACgaactcaaattttcaaaatcaatccGCAACATTTAGAAATGCAGTTAG
AGAAGAACGTGAACACATTGAAAGTTGATCTACTGAACTCTGCTGGCAAT
GTTTCTAAAAAGCTGACGAACTTCAGCGACTCTTTGATGGGACTTCTAAT
ATCGCACCTCGAAAACCACGCAGTCTCGGTGAACCAATCAAAAGTAcagc
aagttgataaaatgaaaaacttgtTGACAGAACTCCAACAAAGGACAATA
AGTGAAATACAGAAGGTGGAAGAAGCATGTTTGAACACCCTTCAACATGA
TTGCGGCTTTTCTGACCAACAAATTGAACAAGTGGTCGGTGAGACGAGAA
ATTCTTTAAAAGAGTTGATTCATGGTTATAGCAATTCTATGAAATCGAGT
GAAAAGTCTTTTCTTGCAAGACGAGAAAGGACCGCCAAACTGACCAACTT
CTGTATCGATTATTTGGTCAAGTTGGTTTCTTCCCGATACAGAACGGTTC
TATCATCGAACATATCTTTCGTTAAATCGTTTCCCTCGCTATCGGATGGT
GTTCGATCGAAACTGGAGACGTCGATTCGAGGGAAGATGGGGATGGTTTC
TTTTGATGTCGTTCTCGCTATCATTAAACACACGCTTGTGGAAATGCAAA
ACGTCAAACACAATTTCCTTCTTCGTATACCTTCATCCTCTTTCGATATG
ATGTCTAATCGAACGGAAGTGATCAACTTGTCAGTTTTGAAACATCTCGA
AAGTGATTTTGAGCTCCCTCATACTTTGCTGGATGCTTTACACGAGAAAT
GTCACTTGATGATCAACCAAGCGTTTCAACATCTTCAACAAAACCTTCAA
CAAGTTGTGCAACAGGAAGTCACCAAGTCAACAAATTTCATCTTCAACGA
AAATCAAGTCATCTTTCGAACGTTTCATGAGAAGTCACGTGTCTCTAAAG
TGAACAAGAAGAAGAATGCACAATATTTATCGCGCAAAGGAAGTTCTTCC
AAAGAGAAAGCCATAGGAGGGAAATTGTTGGACCTTTACCGTGGTGCGAT
TGAAGTACGAGATCACCGCTACCAAGAAAAAGTGCAAGAGATTGAAGAGG
AGCATGATGGAAGTAAAAGCACCAAGAAAGGAAGAGGGAAGTGCGTTCGG
TGCTTCGACCAACAACAAGAACTTTTACAACGCAAAGCGATGGAagatca
aaaattttccgccttctttaaactAGATCAGTATTATATGAGAGAAATGC
TGTTAAAGAAAATGACCAACATAGATGGGAAAACGACCGACTTTGAATCA
CCTCATGATGAAGACGACAGGAAATCGATGGCCAAGAAAACTAAAAGTCC
CAAAAAGCTTTCTGCAAAAATACCTACACGGAGAAAAAGTCGTCGTGTTA
GTGATATGACGTGAatgaatgggaTGTCATCTTCATCGTCATGTTATACG
TTGAATTTGATTCGTTCAAACGAGGTGACTGATAACCTGGATAAGTATGT
CGTGTTGACGTTCATTTTGACGTTGTTGTTGAGTGTAGTGGTAGTTATGG
CGCTGGTCAAATATATCACATACAACATGCAACTTGATGTCGAACGACAG
AGAAAGATCGCCAACAGAAAAGTGTTACCAGTTCGCCTTGgtgatgaaga
aaatgaaggtAGTGAATCGGACAGTGAAGAACTTTTCGATGAAGAATGGA
ACAATAGTGGAATTGAGCGAGATGACAACGAAGTAGAAGAAGGGGAGACA
TGTAGCATTGCAAGTACTCTACAAACCAATTATGTTGAAGCTGAACATGT
TTCTCTGGATCACAAAGACGAATTATCTGATCACAAAATAATCGATCTGG
ATGTCAGTTGGTTGATCTCCTCATTGAACCTACCCCAATCTTTCATCTCA
CCACAACATCCCTCTGTAATCACTCAATTGTTTTCTAACCAACAACATTC
TATTGTAGTCTCCAACTTGGTGCAACACGAACAACTACTCTACCAGTTGG
CCATTATACGGAAATTAGGATCTCTACAGCTGATCAACTTTACTATCGAT
GTGTTGTTACATCAACGCGTTTTACATCAAGAACTTGCGTTGCAAATGAG
AGCAAAGTATGAACAACAATTTGATAGTTTTGACTGTGAACAAACTGAAA
GTCTTTTTTCGGCCAGCAAACAGATAACACTCGTTCTTCAAAACTTCATC
AAAGATTTACAAATGTTATCGGTAGAGCGTAAAGTTTTAGAAGAATTgat
ttctttgttgttttctCATCCTTTGAGTTGCTTGAAGATCTTCTTGTTGG
CTCTACCAGACCATTGTTGTGTGAAAGATGGAGAGACAACCATCTCATCC
ATCGCTTTCGTTGAACGTCTTTTGTTCGCTATCAAAGGAAGGTATCTTGT
CTTTAAAAACGCTGTCAATAATGCcaacaaaacaacaaatgaAGTGCTCG
CCTCCTTTGATCAGAACATGATACAAATTCTTCAACATTTCCAAAAAGAG
TTTCATAAAATAATACgaactcaaattttcaaaatcaatccGCAACATTT
AGAAATGCAGTTAGAGAAGAACGTGAACACATTGAAAGTTGATCTACTGA
ACTCTGCTGGCAATGTTTCTAAAAAGCTGACGAACTTCAGCGACTCTTTG
ATGGGACTTCTAATATCGCACCTCGAAAACCACGCAGTCTCGGTGAACCA
ATCAAAAGTAcagcaagttgataaaatgaaaaacttgtTGACAGAACTCC
AACAAAGGACAATAAGTGAAATACAGAAGGTGGAAGAAGCATGTTTGAAC
ACCCTTCAACATGATTGCGGCTTTTCTGACCAACAAATTGAACAAGTGGT
CGGTGAGACGAGAAATTCTTTAAAAGAGTTGATTCATGGTTATAGCAATT
CTATGAAATCGAGTGAAAAGTCTTTTCTTGCAAGACGAGAAAGGACCGCC
AAACTGACCAACTTCTGTATCGATTATTTGGTCAAGTTGGTTTCTTCCCG
ATACAGAACGGTTCTATCATCGAACATATCTTTCGTTAAATCGTTTCCCT
CGCTATCGGATGGTGTTCGATCGAAACTGGAGACGTCGATTCGAGGGAAG
ATGGGGATGGTTTCTTTTGATGTCGTTCTCGCTATCATTAAACACACGCT
TGTGGAAATGCAAAACGTCAAACACAATTTCCTTCTTCGTATACCTTCAT
CCTCTTTCGATATGATGTCTAATCGAACGGAAGTGATCAACTTGTCAGTT
TTGAAACATCTCGAAAGTGATTTTGAGCTCCCTCATACTTTGCTGGATGC
TTTACACGAGAAATGTCACTTGATGATCAACCAAGCGTTTCAACATCTTC
AACAAAACCTTCAACAAGTTGTGCAACAGGAAGTCACCAAGTCAACAAAT
TTCATCTTCAACGAAAATCAAGTCATCTTTCGAACGTTTCATGAGAAGTC
ACGTGTCTCTAAAGTGAACAAGAAGAAGAATGCACAATATTTATCGCGCA
AAGGAAGTTCTTCCAAAGAGAAAGCCATAGGAGGGAAATTGTTGGACCTT
TACCGTGGTGCGATTGAAGTACGAGATCACCGCTACCAAGAAAAAGTGCA
AGAGATTGAAGAGGAGCATGATGGAAGTAAAAGCACCAAGAAAGGAAGAG
GGAAGTGCGTTCGGTGCTTCGACCAACAACAAGAACTTTTACAACGCAAA
GCGATGGAagatcaaaaattttccgccttctttaaactAGATCAGTATTA
TATGAGAGAAATGCTGTTAAAGAAAATGACCAACATAGATGGGAAAACGA
CCGACTTTGAATCACCTCATGATGAAGACGACAGGAAATCGATGGCCAAG
AAAACTAAAAGTCCCAAAAAGCTTTCTGCAAAAATACCTACACGGAGAAA
AAGTCGTCGTGTTAGTGATATGACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:29608..32121 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2514:1 |
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