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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:6323..8368+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040372 ID=XLOC_040372|Name=XLOC_040372|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2046bp|location=Sequence derived from alignment at sc0000372_pilon:6323..8368+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAAAAAGATGTTTGTCATAAAACTGCTTCTGCTCTATGCTCTCCT
GAATGTTTCCTTCTGTTCCAAGAAGAAATATTGTGAGCCTGATTTGCTTT
GCTGGCCCAGTCAGATTGAATGGAACGATTTTGATGAATCTTTGAACGGG
ACACTTCATCAACTTTCACCAGATGATTACGAACAATGTGAAAAACAAGG
TGACAATGCATTCAACATCTCATCCACTGGAAATGGTATTTGCATGCAAT
ATCATGATTGCTCACGTCAATTCTGTCAAAGTAGCACTTCTTGGAACATC
CCTGCTTACAGCGTGGAGGTCAAATCTGTGAGAGATGTACAACTGGCAAT
TGCGTTCGCCAATAAATACAACATTGCTGTTTCAATCAAAACATCTGGTC
ATTCATATGCTGGCTCGAGTATGGGGAAATCTACTTTGTTGATTTGGACG
CGCAATCTCCCTGAACACTTGAAGACTGTAGATGATGTCAAACAAAACTT
CACTGATTCTTGCGGAACCGTTTTCACTCATGCAGTCAAAGTTGGTGGTG
GACAAAGATGGAATAGTGTATACAAAGCCTTGAATTCAAAATACCATATT
GTTGGAGGTGGTGGATTGACAGTATCTGCAGCAGGTGGCTGGCTTCAAGG
ATGTGGCTTGTCTTCCATGTCTCGCAAATATGGGATAGGAATTGATAATG
TTATTGACTTTGACGTTGTCCTTGCAAATGGAAGTTGTGTTACCGTAGAT
AAGTGTACTAATCCAGACTTGTTTTGGGCGCTACGAGGCGGAGGTGGTGG
TACTTGGGGTGTTGTCACAGCAGTTCACTACAAGATTCGACCAGCTGAAC
CCATTCTTGAGTTTTACATGAACATTGCGAACATTGGAGCCCCTTGGTAT
TACACAGGGACTGTAGATTCTTGGTTGGAAGAGTGGGTGAAACTTTCACC
AAATCTGGACAACCGTTGGGGAGGCTATTGGACATTGAACACacttattt
tgtattttgtcgGTTCTGAAGAAGATGCTAAAGCAACCTTCATCAATGAC
TTCAATAAATGGAAAAATGACTTGCCTGCGCTAGAGAAACTAGCTGTCAC
AACAAACATCTTGACGGCTGACAGTTATTTCAATATTCGTGGAGGTTATC
AAATGGATACTGATAAAACTGGAGAACGTACGATCAATATCGCAAGTCGG
TTGATCCCGCGTGAATTTGTGTTGAACGAACCTGAGGAAGCTTTGGAACA
TTTGAAATGGATGGTGAGAAACGGGTTTTTCACTTTCAATTATCTCTTAG
GAGGTGTAGTGATGGATCCTAGCAAAGACGAAACGGCTGTCCATCCCGCA
ATGAGAAAAGCTGTTTGGCAAATCGAAACCTTCCAGGATGAAATGACGAA
TTATTTGCGAGAGAATATCAAAAATACAGGAGCTGGATTCAACCATGCTT
GGGCGAAAGAACCTGATTGGCGAAACTCTTTATGGGGAGAACACCTGGAG
AAATTGCAAgagttgaaaaagaaatatgattctGAAAATCGTTTCAACTG
TTGGCATTGTATCGGTTACCAAGGAGATGAATATCCACGCTTGCAACCTG
AACCATCTCTCTCACCTTCCACTTCACTCGAAATTTCATCCTCTTCGTTC
ATGTCATCTGAATCACCATCATCTTCTCCCCTTCTTTCTACCACTCTCAT
ATCGTCACAAGTAGTTTCATTGTATATCCAATCATCCTCGCTCTCTTTCT
CAAGCTCAACTCAATCTTTCTCGCAATCCCAAACCTCAACAACTTCCATG
CCTGAATCATTCGCACCTTCTCACACAACGTTCATCTCTTCCACGCCATC
TTTTCCATCTATTGCCGCATCCTCTTCATCCATGTCACCCACCAAGTCAC
CTATTTCACCTACACCACCATCCTCATCACAAGCCATCACTTCAACAGCA
TCCGTTACCTCACCCTCATCATCAGCTCACCTTCGAGTCAATTCACTTCT
CGCATTTCTCTTTTCTCTTATCTCTTTTAGTTTTCTACTCATTTAA Coding sequence (CDS) from alignment at sc0000372_pilon:6323..8368+ >XLOC_040372 ID=XLOC_040372|Name=XLOC_040372|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4092bp|location=Sequence derived from alignment at sc0000372_pilon:6323..8368+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAAAAAGATGTTTGTCATAAAACTGCTTCTGCTCTATGCTCTCCT
GAATGTTTCCTTCTGTTCCAAGAAGAAATATTGTGAGCCTGATTTGCTTT
GCTGGCCCAGTCAGATTGAATGGAACGATTTTGATGAATCTTTGAACGGG
ACACTTCATCAACTTTCACCAGATGATTACGAACAATGTGAAAAACAAGG
TGACAATGCATTCAACATCTCATCCACTGGAAATGGTATTTGCATGCAAT
ATCATGATTGCTCACGTCAATTCTGTCAAAGTAGCACTTCTTGGAACATC
CCTGCTTACAGCGTGGAGGTCAAATCTGTGAGAGATGTACAACTGGCAAT
TGCGTTCGCCAATAAATACAACATTGCTGTTTCAATCAAAACATCTGGTC
ATTCATATGCTGGCTCGAGTATGGGGAAATCTACTTTGTTGATTTGGACG
CGCAATCTCCCTGAACACTTGAAGACTGTAGATGATGTCAAACAAAACTT
CACTGATTCTTGCGGAACCGTTTTCACTCATGCAGTCAAAGTTGGTGGTG
GACAAAGATGGAATAGTGTATACAAAGCCTTGAATTCAAAATACCATATT
GTTGGAGGTGGTGGATTGACAGTATCTGCAGCAGGTGGCTGGCTTCAAGG
ATGTGGCTTGTCTTCCATGTCTCGCAAATATGGGATAGGAATTGATAATG
TTATTGACTTTGACGTTGTCCTTGCAAATGGAAGTTGTGTTACCGTAGAT
AAGTGTACTAATCCAGACTTGTTTTGGGCGCTACGAGGCGGAGGTGGTGG
TACTTGGGGTGTTGTCACAGCAGTTCACTACAAGATTCGACCAGCTGAAC
CCATTCTTGAGTTTTACATGAACATTGCGAACATTGGAGCCCCTTGGTAT
TACACAGGGACTGTAGATTCTTGGTTGGAAGAGTGGGTGAAACTTTCACC
AAATCTGGACAACCGTTGGGGAGGCTATTGGACATTGAACACacttattt
tgtattttgtcgGTTCTGAAGAAGATGCTAAAGCAACCTTCATCAATGAC
TTCAATAAATGGAAAAATGACTTGCCTGCGCTAGAGAAACTAGCTGTCAC
AACAAACATCTTGACGGCTGACAGTTATTTCAATATTCGTGGAGGTTATC
AAATGGATACTGATAAAACTGGAGAACGTACGATCAATATCGCAAGTCGG
TTGATCCCGCGTGAATTTGTGTTGAACGAACCTGAGGAAGCTTTGGAACA
TTTGAAATGGATGGTGAGAAACGGGTTTTTCACTTTCAATTATCTCTTAG
GAGGTGTAGTGATGGATCCTAGCAAAGACGAAACGGCTGTCCATCCCGCA
ATGAGAAAAGCTGTTTGGCAAATCGAAACCTTCCAGGATGAAATGACGAA
TTATTTGCGAGAGAATATCAAAAATACAGGAGCTGGATTCAACCATGCTT
GGGCGAAAGAACCTGATTGGCGAAACTCTTTATGGGGAGAACACCTGGAG
AAATTGCAAgagttgaaaaagaaatatgattctGAAAATCGTTTCAACTG
TTGGCATTGTATCGGTTACCAAGGAGATGAATATCCACGCTTGCAACCTG
AACCATCTCTCTCACCTTCCACTTCACTCGAAATTTCATCCTCTTCGTTC
ATGTCATCTGAATCACCATCATCTTCTCCCCTTCTTTCTACCACTCTCAT
ATCGTCACAAGTAGTTTCATTGTATATCCAATCATCCTCGCTCTCTTTCT
CAAGCTCAACTCAATCTTTCTCGCAATCCCAAACCTCAACAACTTCCATG
CCTGAATCATTCGCACCTTCTCACACAACGTTCATCTCTTCCACGCCATC
TTTTCCATCTATTGCCGCATCCTCTTCATCCATGTCACCCACCAAGTCAC
CTATTTCACCTACACCACCATCCTCATCACAAGCCATCACTTCAACAGCA
TCCGTTACCTCACCCTCATCATCAGCTCACCTTCGAGTCAATTCACTTCT
CGCATTTCTCTTTTCTCTTATCTCTTTTAGTTTTCTACTCATTTAAATGA
GAAAAAAGATGTTTGTCATAAAACTGCTTCTGCTCTATGCTCTCCTGAAT
GTTTCCTTCTGTTCCAAGAAGAAATATTGTGAGCCTGATTTGCTTTGCTG
GCCCAGTCAGATTGAATGGAACGATTTTGATGAATCTTTGAACGGGACAC
TTCATCAACTTTCACCAGATGATTACGAACAATGTGAAAAACAAGGTGAC
AATGCATTCAACATCTCATCCACTGGAAATGGTATTTGCATGCAATATCA
TGATTGCTCACGTCAATTCTGTCAAAGTAGCACTTCTTGGAACATCCCTG
CTTACAGCGTGGAGGTCAAATCTGTGAGAGATGTACAACTGGCAATTGCG
TTCGCCAATAAATACAACATTGCTGTTTCAATCAAAACATCTGGTCATTC
ATATGCTGGCTCGAGTATGGGGAAATCTACTTTGTTGATTTGGACGCGCA
ATCTCCCTGAACACTTGAAGACTGTAGATGATGTCAAACAAAACTTCACT
GATTCTTGCGGAACCGTTTTCACTCATGCAGTCAAAGTTGGTGGTGGACA
AAGATGGAATAGTGTATACAAAGCCTTGAATTCAAAATACCATATTGTTG
GAGGTGGTGGATTGACAGTATCTGCAGCAGGTGGCTGGCTTCAAGGATGT
GGCTTGTCTTCCATGTCTCGCAAATATGGGATAGGAATTGATAATGTTAT
TGACTTTGACGTTGTCCTTGCAAATGGAAGTTGTGTTACCGTAGATAAGT
GTACTAATCCAGACTTGTTTTGGGCGCTACGAGGCGGAGGTGGTGGTACT
TGGGGTGTTGTCACAGCAGTTCACTACAAGATTCGACCAGCTGAACCCAT
TCTTGAGTTTTACATGAACATTGCGAACATTGGAGCCCCTTGGTATTACA
CAGGGACTGTAGATTCTTGGTTGGAAGAGTGGGTGAAACTTTCACCAAAT
CTGGACAACCGTTGGGGAGGCTATTGGACATTGAACACacttattttgta
ttttgtcgGTTCTGAAGAAGATGCTAAAGCAACCTTCATCAATGACTTCA
ATAAATGGAAAAATGACTTGCCTGCGCTAGAGAAACTAGCTGTCACAACA
AACATCTTGACGGCTGACAGTTATTTCAATATTCGTGGAGGTTATCAAAT
GGATACTGATAAAACTGGAGAACGTACGATCAATATCGCAAGTCGGTTGA
TCCCGCGTGAATTTGTGTTGAACGAACCTGAGGAAGCTTTGGAACATTTG
AAATGGATGGTGAGAAACGGGTTTTTCACTTTCAATTATCTCTTAGGAGG
TGTAGTGATGGATCCTAGCAAAGACGAAACGGCTGTCCATCCCGCAATGA
GAAAAGCTGTTTGGCAAATCGAAACCTTCCAGGATGAAATGACGAATTAT
TTGCGAGAGAATATCAAAAATACAGGAGCTGGATTCAACCATGCTTGGGC
GAAAGAACCTGATTGGCGAAACTCTTTATGGGGAGAACACCTGGAGAAAT
TGCAAgagttgaaaaagaaatatgattctGAAAATCGTTTCAACTGTTGG
CATTGTATCGGTTACCAAGGAGATGAATATCCACGCTTGCAACCTGAACC
ATCTCTCTCACCTTCCACTTCACTCGAAATTTCATCCTCTTCGTTCATGT
CATCTGAATCACCATCATCTTCTCCCCTTCTTTCTACCACTCTCATATCG
TCACAAGTAGTTTCATTGTATATCCAATCATCCTCGCTCTCTTTCTCAAG
CTCAACTCAATCTTTCTCGCAATCCCAAACCTCAACAACTTCCATGCCTG
AATCATTCGCACCTTCTCACACAACGTTCATCTCTTCCACGCCATCTTTT
CCATCTATTGCCGCATCCTCTTCATCCATGTCACCCACCAAGTCACCTAT
TTCACCTACACCACCATCCTCATCACAAGCCATCACTTCAACAGCATCCG
TTACCTCACCCTCATCATCAGCTCACCTTCGAGTCAATTCACTTCTCGCA
TTTCTCTTTTCTCTTATCTCTTTTAGTTTTCTACTCATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:6323..8368 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1990-2058:1978 |
| Aaloc | 1768-1986:1759 |
| Aaloc | 1-1758:1 |
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