|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000212_pilon:78584..79721- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040369 ID=XLOC_040369|Name=XLOC_040369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1138bp|location=Sequence derived from alignment at sc0000212_pilon:78584..79721- (Clytia hemisphaerica_ch_hm2_pilon)
TATTTTTTCAGTATGGTGATGGCACGAGAAAGTCCTGACTTGATTCGCTC
TGCGACTGCACCCATCTCAGCAAGCTCGCACGAATCTCGTAAAGAAAACA
AGAAAGCCAAATCACTGACTGAGAGATTCCGCTCGAAGTTCAGTCGGTCA
AAAGGCTCATCACACACAGCCATCAAAGAAATCGATACCAATGAGGAGAT
CACTTACGGGAAAATCGTTGTTTTAGGACAAGCCGGAGTTGGGAAGACGT
CCTTCATCCATCGGTTGGTAAACAACTACTTCACAGATCAATACACACCC
ACCACCACAAGTTCCAGTTTCGAAGTCACCGCTATAGTCGAATGTGAAGA
CCTTTTCAAAAGCAAGAAAGAAAGATTCATTGATTACGCAAAATCTGTTC
GAAAAGTTAAGAGTTTCTCACGTACGACCATCAGTCAACAGTTAGCAAAA
CAACAATGTAAAACAAAGACCTTCAAATTTCAACTGGTGGATACAACAGA
AGACATCAATGAATCATCACCCATGGAATATCGATCGACAGTCGCCAATG
CTCATGGATTCTTACTGGTCTGTTCATCAGACAAAGCAGACAGCATCCAA
TACATCCGTGATATTTACCAAGACATCGCCAAGATGAGAATCAACACTAC
AGTCCCTGTTCTCATCATCCAAAATAAGGATGATCTACACGCAGGTAGCG
AAGAAGATGAGACTTTCGATGCCGAGTTAGAGCAACTGGCAGTAGAGTTG
GACGTTGAAACGTGTCTCCTATCTACCGCTAACTCCAGTGGCTTCGAAAA
TTTAACAGAACTTTTATTGAATGAAATGAACGTGTACAATGATGATTGTC
GGGTTGAAATGGCTTTACCTGATGAAGTCGCTTACTGTGACCAATCAGAT
GATGAATTAGAAACAGGTAAGCATCATTGAAATCTTTTCTGTTTCACTGA
GTTTTAGTATTAAGCAATGTAAAAAGACGTGAATGGAAGAAGTGAAATAC
CTCCCTACTTTCGTTCCATATCTCTTATATTGCATCACTTATAAAATATT
TCTCTTTTTCTCATCATCAGGGCCGAAAGTGATCACTAACAGAAACGCAG
CAGGAAAAATGAGACGGATGCGATCAAGCGTTAATTGA Coding sequence (CDS) from alignment at sc0000212_pilon:78584..79721- >XLOC_040369 ID=XLOC_040369|Name=XLOC_040369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000212_pilon:78584..79721- (Clytia hemisphaerica_ch_hm2_pilon)
TATTTTTTCAGTATGGTGATGGCACGAGAAAGTCCTGACTTGATTCGCTC
TGCGACTGCACCCATCTCAGCAAGCTCGCACGAATCTCGTAAAGAAAACA
AGAAAGCCAAATCACTGACTGAGAGATTCCGCTCGAAGTTCAGTCGGTCA
AAAGGCTCATCACACACAGCCATCAAAGAAATCGATACCAATGAGGAGAT
CACTTACGGGAAAATCGTTGTTTTAGGACAAGCCGGAGTTGGGAAGACGT
CCTTCATCCATCGGTTGGTAAACAACTACTTCACAGATCAATACACACCC
ACCACCACAAGTTCCAGTTTCGAAGTCACCGCTATAGTCGAATGTGAAGA
CCTTTTCAAAAGCAAGAAAGAAAGATTCATTGATTACGCAAAATCTGTTC
GAAAAGTTAAGAGTTTCTCACGTACGACCATCAGTCAACAGTTAGCAAAA
CAACAATGTAAAACAAAGACCTTCAAATTTCAACTGGTGGATACAACAGA
AGACATCAATGAATCATCACCCATGGAATATCGATCGACAGTCGCCAATG
CTCATGGATTCTTACTGGTCTGTTCATCAGACAAAGCAGACAGCATCCAA
TACATCCGTGATATTTACCAAGACATCGCCAAGATGAGAATCAACACTAC
AGTCCCTGTTCTCATCATCCAAAATAAGGATGATCTACACGCAGGTAGCG
AAGAAGATGAGACTTTCGATGCCGAGTTAGAGCAACTGGCAGTAGAGTTG
GACGTTGAAACGTGTCTCCTATCTACCGCTAACTCCAGTGGCTTCGAAAA
TTTAACAGAACTTTTATTGAATGAAATGAACGTGTACAATGATGATTGTC
GGGTTGAAATGGCTTTACCTGATGAAGTCGCTTACTGTGACCAATCAGAT
GATGAATTAGAAACAGTATTTTTTCAGTATGGTGATGGCACGAGAAAGTC
CTGACTTGATTCGCTCTGCGACTGCACCCATCTCAGCAAGCTCGCACGAA
TCTCGTAAAGAAAACAAGAAAGCCAAATCACTGACTGAGAGATTCCGCTC
GAAGTTCAGTCGGTCAAAAGGCTCATCACACACAGCCATCAAAGAAATCG
ATACCAATGAGGAGATCACTTACGGGAAAATCGTTGTTTTAGGACAAGCC
GGAGTTGGGAAGACGTCCTTCATCCATCGGTTGGTAAACAACTACTTCAC
AGATCAATACACACCCACCACCACAAGTTCCAGTTTCGAAGTCACCGCTA
TAGTCGAATGTGAAGACCTTTTCAAAAGCAAGAAAGAAAGATTCATTGAT
TACGCAAAATCTGTTCGAAAAGTTAAGAGTTTCTCACGTACGACCATCAG
TCAACAGTTAGCAAAACAACAATGTAAAACAAAGACCTTCAAATTTCAAC
TGGTGGATACAACAGAAGACATCAATGAATCATCACCCATGGAATATCGA
TCGACAGTCGCCAATGCTCATGGATTCTTACTGGTCTGTTCATCAGACAA
AGCAGACAGCATCCAATACATCCGTGATATTTACCAAGACATCGCCAAGA
TGAGAATCAACACTACAGTCCCTGTTCTCATCATCCAAAATAAGGATGAT
CTACACGCAGGTAGCGAAGAAGATGAGACTTTCGATGCCGAGTTAGAGCA
ACTGGCAGTAGAGTTGGACGTTGAAACGTGTCTCCTATCTACCGCTAACT
CCAGTGGCTTCGAAAATTTAACAGAACTTTTATTGAATGAAATGAACGTG
TACAATGATGATTGTCGGGTTGAAATGGCTTTACCTGATGAAGTCGCTTA
CTGTGACCAATCAGATGATGAATTAGAAACAGGGCCGAAAGTGATCACTA
ACAGAAACGCAGCAGGAAAAATGAGACGGATGCGATCAAGCGTTAATTGA
GGCCGAAAGTGATCACTAACAGAAACGCAGCAGGAAAAATGAGACGGATG
CGATCAAGCGTTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212_pilon | genome | sc0000212_pilon:78584..79721 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-987:67 |
| Aaloc | 4-918:1139 |
|
