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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:51854..53202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040368 ID=XLOC_040368|Name=XLOC_040368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1349bp|location=Sequence derived from alignment at sc0000372_pilon:51854..53202- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCATATNATCATTGATGAACAGGACCACATGCAATTTCAGTTAGACGA
TAGCACGATTGCTACAAATAATGAAAGTTTTTTACAAATTGATAAAATGG
ACAACCTTATGGCACTGGTCATGACTTTTGTTAGAGAATGTTGTTATTCC
AATGATACAATGCAATGGAAGAAATCCAAAGCTTTATTTCAAGAACTGAT
TAGTATTTTCGAGAAGGTCATTTTGAAAGCACAAGAGAGCTCGCATGTAC
AATTTATACTTTTCTACATCTCTGGCTTAGATAAAGTAAGTATTTTTTTG
ACTTCTTAGGTTGGTCTAAGCAGCATAAGCCTTTATTAACAATAGTGAGG
GACAGTAAAATTTGTGCCTGAAGTAAGAAATGTTTGTTTTGAGGTACTGG
GGTTTGTGGTACATATACCTGTACCATTGCTCTGCAAAAAAAACTGCGAC
AAGAGTTTCAAATAATCTGGAACAATTTCATAATTTACATTGACAGTATT
TTCTGAAATTCGAGGTGTGCTTTCATTTAATTCTCAACTTTTCCACTTTA
ATTTTTTCAGAACCTAAGCAATGATTTTGTGGGTGCCTGTTGGATGATGT
TTGAAAACCCTTCCAATTCGTTGGTCACTCGACAGGGTGCTTGTTCTTAC
CTCGGAAGTTATTTAGCACGTGCCAGAATTGTTGATAAAGAGACCATCAG
CCACCAAATGAAACACATGTCAGAATGGTTGCACAGATATCTCAAGTTAC
AAGATGGAAGCAACATACAAGCAGACTTCCATAAACATGGCGCGTTTTAT
AGTTTATCACAAACGTTCTTTTATGTGTTTGTTTATCATCACAAAGCATT
CGTGGAGTCAGAGAAAGGAATAAGTTACTTGAAATCACTAGACTTGCCCA
GGATTGTACTTTCTAAATTGAACCCGTTGAGATTTTGCTTGAAGACGATT
GTAGACATGTTTGCACGCATCACACGTATGTACGAACTGGTGTTCTGTTA
CAGTACTATCGAGAAAAATAATAGACAAAAAATCTTCTCACAACTTGAGC
AAAATGATAGGAAGGCAAAATTTGTAGAGCATTTCTTTCCATTTGACCCG
TACATCCTTCCACGATCGAGCGTATTCATAAAACCTTTGTACAACGAATG
GAACGATTTGAATGAGATGACGTCAGAAGAGGAACATGAAGAAGAAGAGG
TGCTTAGAGATGACATGGAAGACATTGATCATATGTTCGCCTCCATCAAC
CCTCATCTCACCATGGGAAAACTTTCCACCAGTAGAAAATCTGCTTCACA
TAGTTTTGACATGGTGTGTATATCTCCTGGCTTTATGAACTATAATTGA Coding sequence (CDS) from alignment at sc0000372_pilon:51854..53202- >XLOC_040368 ID=XLOC_040368|Name=XLOC_040368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2148bp|location=Sequence derived from alignment at sc0000372_pilon:51854..53202- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCATATNATCATTGATGAACAGGACCACATGCAATTTCAGTTAGACGA
TAGCACGATTGCTACAAATAATGAAAGTTTTTTACAAATTGATAAAATGG
ACAACCTTATGGCACTGGTCATGACTTTTGTTAGAGAATGTTGTTATTCC
AATGATACAATGCAATGGAAGAAATCCAAAGCTTTATTTCAAGAACTGAT
TAGTATTTTCGAGAAGGTCATTTTGAAAGCACAAGAGAGCTCGCATGTAC
AATTTATACTTTTCTACATCTCTGGCTTAGATAAAATTCATATNATCATT
GATGAACAGGACCACATGCAATTTCAGTTAGACGATAGCACGATTGCTAC
AAATAATGAAAGTTTTTTACAAATTGATAAAATGGACAACCTTATGGCAC
TGGTCATGACTTTTGTTAGAGAATGTTGTTATTCCAATGATACAATGCAA
TGGAAGAAATCCAAAGCTTTATTTCAAGAACTGATTAGTATTTTCGAGAA
GGTCATTTTGAAAGCACAAGAGAGCTCGCATGTACAATTTATACTTTTCT
ACATCTCTGGCTTAGATAAAAACCTAAGCAATGATTTTGTGGGTGCCTGT
TGGATGATGTTTGAAAACCCTTCCAATTCGTTGGTCACTCGACAGGGTGC
TTGTTCTTACCTCGGAAGTTATTTAGCACGTGCCAGAATTGTTGATAAAG
AGACCATCAGCCACCAAATGAAACACATGTCAGAATGGTTGCACAGATAT
CTCAAGTTACAAGATGGAAGCAACATACAAGCAGACTTCCATAAACATGG
CGCGTTTTATAGTTTATCACAAACGTTCTTTTATGTGTTTGTTTATCATC
ACAAAGCATTCGTGGAGTCAGAGAAAGGAATAAGTTACTTGAAATCACTA
GACTTGCCCAGGATTGTACTTTCTAAATTGAACCCGTTGAGATTTTGCTT
GAAGACGATTGTAGACATGTTTGCACGCATCACACGTATGTACGAACTGG
TGTTCTGTTACAGTACTATCGAGAAAAATAATAGACAAAAAATCTTCTCA
CAACTTGAGCAAAATGATAGGAAGGCAAAATTTGTAGAGCATTTCTTTCC
ATTTGACCCGTACATCCTTCCACGATCGAGCGTATTCATAAAACCTTTGT
ACAACGAATGGAACGATTTGAATGAGATGACGTCAGAAGAGGAACATGAA
GAAGAAGAGGTGCTTAGAGATGACATGGAAGACATTGATCATATGTTCGC
CTCCATCAACCCTCATCTCACCATGGGAAAACTTTCCACCAGTAGAAAAT
CTGCTTCACATAGTTTTGACATGGTGTGTATATCTCCTGGCTTTATGAAC
TATAATTGAAACCTAAGCAATGATTTTGTGGGTGCCTGTTGGATGATGTT
TGAAAACCCTTCCAATTCGTTGGTCACTCGACAGGGTGCTTGTTCTTACC
TCGGAAGTTATTTAGCACGTGCCAGAATTGTTGATAAAGAGACCATCAGC
CACCAAATGAAACACATGTCAGAATGGTTGCACAGATATCTCAAGTTACA
AGATGGAAGCAACATACAAGCAGACTTCCATAAACATGGCGCGTTTTATA
GTTTATCACAAACGTTCTTTTATGTGTTTGTTTATCATCACAAAGCATTC
GTGGAGTCAGAGAAAGGAATAAGTTACTTGAAATCACTAGACTTGCCCAG
GATTGTACTTTCTAAATTGAACCCGTTGAGATTTTGCTTGAAGACGATTG
TAGACATGTTTGCACGCATCACACGTATGTACGAACTGGTGTTCTGTTAC
AGTACTATCGAGAAAAATAATAGACAAAAAATCTTCTCACAACTTGAGCA
AAATGATAGGAAGGCAAAATTTGTAGAGCATTTCTTTCCATTTGACCCGT
ACATCCTTCCACGATCGAGCGTATTCATAAAACCTTTGTACAACGAATGG
AACGATTTGAATGAGATGACGTCAGAAGAGGAACATGAAGAAGAAGAGGT
GCTTAGAGATGACATGGAAGACATTGATCATATGTTCGCCTCCATCAACC
CTCATCTCACCATGGGAAAACTTTCCACCAGTAGAAAATCTGCTTCACAT
AGTTTTGACATGGTGTGTATATCTCCTGGCTTTATGAACTATAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:51854..53202 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-1710:790 |
| Aaloc | 637-921:1350 |
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