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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:36898..40065+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040360 ID=XLOC_040360|Name=XLOC_040360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3168bp|location=Sequence derived from alignment at sc0000372_pilon:36898..40065+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCTAGTGTTAGTATTTGGTCGCTGAATGAGATGAGCTGTCGAGC
GTGTGGGAGTGTTCCATTGCGTGATCACCTCACTACACCTGTCAATCCTC
GCGTTGCCAGGGGTTTCGGCAAACTCTCCTCTTCTGGTATTACAACGCGC
GTGCAATACAATGACCTTTCCAACATCCATATCTCGCCCTTCAAAGGTCC
TATATATGACCTTATTTTAattgtatttttcaattttaaagcaTCATGAT
TATCAATCAATAAGCCATGCCAAcatatataaatttttaaaaagatcatT
TTGATAATGGTCATGGTACAGAATCGCAAAAATGGttatcaaattcataa
aaaagcGAATCCTTGGGGACTAGGTACGAGGTTTAACAATCTTTCAGGTG
TAGTTAACAACCAACATCCTTGTACAAAATCTTTCCTGTGAACTTACAGA
AACATTCTTTTCTTCTAGACACAGGAAGGAGCAGCTTTGAACGATCATCC
ACAACTCACTCAACACAAAATGGAATCCAAAATCTCGCTTCTCATCTAag
gttttttttcacacaaattTTAAACCGTCCTCTTTCTTCGGGCGGGAAGA
AGTTTTGGCCAATTCGccaatttttgtacaatttggacgaattaagaaaa
atttaagtttggCGTCGCGATGAATGATTTTGTAATGACTGGGCTAATTA
AGGGTGTTGTCAGGAAAAATGAAACCAAAGTATTAAAACCTTTCAATGCC
GGCAAAAATCCTGATATCCAatttaaagctgaaaattagAATTTTGGGAT
CATCCATTTTATCCCTAATGATTAAAAATAGATTTATTGAAGACAGGTGT
TTTAAAGCTCTTACATACTTTCCTTCTTTTCAGCACGAAATCGATCTTGG
TCCCATCAACCACCACTACACCTCTCCCGAAACACATCTCCGACAAACCA
CCATCTTGCATGATGACGTCACAGCTCTTGAAATGCGATCCTCGACAACT
GCTTGTGACAGGGTATCGTTCTGATGTCTTCACTTCCAGACCTTTTCTAC
CGGCGacgaaaagtttgaaaacaacaaCAGCGACCGCTTCTTCGTCTTAC
CATGGCAATAAGCAAACAACCCCAAAAACTCATCACAGCTTCAGGTACCT
AAATTGAGTTAGATTTAATTCATAGTTTCATACTTTCACACCTAACACTT
TGATCTACTTTAATAGGATGAATTTTCGCGgcaacttaatttcgcggatg
acattATCAGGGGACAGtaattttgtgtcttttttacTGTCAAATTATAC
AtatggttgttgaaatacgtattattagcgcttctttgatgtcaGTTAAC
ATTTTAAAGTAGTTATccgacattttttgagttttgttcaaAAACATTTC
GCCGATAAGACTATTccaaatttccagtttttgtAAGAATAAAGGTCTAA
CACTGTAATTTCTCTGCTCTCTTTAAAGGTGGAAAACCAAACCATCAAAT
ACTGCACGAGGTATTTTTTATCCTTCTCAAAAGCTTTATCTGTAGTTTGG
GGTTCAGTTATTCACTCAACACTCGGAATAAGTACTTGGCACCCTGAACT
GCAATCGTCTCACCTCCCCGGTGGGAggggggggCACTCGActcaaaatt
aggcctttgaaatagaacccttacagtgcagagataatttatgtaaattt
gagtaaatttgaacaaaaaatcgAGCATTCCAgcgtatttttttgaaacc
tttggagcatttttaggcaaaaatttTCAGTGATCGAAATAGCGGTGGGT
TATCGGTTGAAaccaacaagaaaaaaaatcaccgacccgaaaattttcgg
aaaatgtgaaaataacCGACCAATATTTGTGTGAGCTAAACTAATCTTGA
TGATCAGTTATTCATGGAATATCTACTTTATGACTAGTTCCTTAGTTGTA
ACTTTCTTCTCTTATTTCTTGGTTACTTCAAACTCTAttacacctccttc
tcacagacccggtaggatttttcaaccagtggggataaaaataacggacc
aaattcgatggggattgatatttccatagtttttatggctggggatttca
attcttttgttttcaagtcaaagaattcagtagggatgggaaaaatagca
taatattttgcagtgaggattggtttatttgatttttttcattgggGAGA
GAAattggaagataattttccaccggggacgatatttaggccaatttttc
cagtgggaagggttcccagtgggtctgtgagaagggggtgttctaTTGAC
TTTCTCCTctaatttcttcgttacttcgaaTTCTATTCCTTCGTGACTTT
CTCCTctaatttcttcgttacttcgagCACTATTCCTTGCTAACTTTCCA
ATGCTTCAGTCTTAAaaagtttggtatcgttgggAAGGTAGGAAGGAGCT
TATTACCAAACGTTTTAAAAGTTGAAGCATTGGCTGAGAAATAAACAAGC
ATAGTAAAATTTAGTGCACatttatcgtgaatagactttcaTTTCTTCGA
TACTTTAAACCCTATAAAACTTTCTTCTTTAATTACTTCTTTTTATCTGG
ACTTAATTTAGCATTTTATTACTGATGTCAgtttgttttctgttttctgt
taAGTTGAGAGATTTATATGAACTAATTGACATGAAAATAAGGCTAAGGG
TTAAAACAAGTGTTTAAAAGCCAgcaaaaaagacaaattttCGAAGTGTA
TATTAAATAACCGATCAGAAGAAAAACCTTATTTCGACCACTGCAAAATA
TGGttggattttacaaattttacacccttagagtgcatttttctcatctt
tgctcatttcgacaCTCACATTActctttgggaagcttggaaaaggaACC
CTTAAGGACCGTAAGTACGGTCGGTTGTTTATCTTGAGTGCCCCCCTCCC
CGGTCTCACCTCCCCTGAGAAGTTGATTTCTGAAAATAACCACCCATCTT
ATGTTTGATTAGTTGAGGATGTTTAAATGATTTTCATTTGTAGTGAACAA
TTACCCAGACCCCATGTATAGTGCAGACTCAGCATTTTTACAGCGTGTGA
CGGAAATGGCCAGTTTGGAGGTGGAAACTGTCAAAACTGAAAAGTGGAAG
AAAATGCGACGAAAATAA Coding sequence (CDS) from alignment at sc0000372_pilon:36898..40065+ >XLOC_040360 ID=XLOC_040360|Name=XLOC_040360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000372_pilon:36898..40065+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCTAGTGTTAGTATTTGGTCGCTGAATGAGATGAGCTGTCGAGC
GTGTGGGAGTGTTCCATTGCGTGATCACCTCACTACACCTGTCAATCCTC
GCGTTGCCAGGGGTTTCGGCAAACTCTCCTCTTCTGGTATTACAACGCGC
GTGCAATACAATGACCTTTCCAACATCCATATCTCGCCCTTCAAAGATGA
AGTCTAGTGTTAGTATTTGGTCGCTGAATGAGATGAGCTGTCGAGCGTGT
GGGAGTGTTCCATTGCGTGATCACCTCACTACACCTGTCAATCCTCGCGT
TGCCAGGGGTTTCGGCAAACTCTCCTCTTCTGGTATTACAACGCGCGTGC
AATACAATGACCTTTCCAACATCCATATCTCGCCCTTCAAAGACACAGGA
AGGAGCAGCTTTGAACGATCATCCACAACTCACTCAACACAAAATGGAAT
CCAAAATCTCGCTTCTCATCTAagACACAGGAAGGAGCAGCTTTGAACGA
TCATCCACAACTCACTCAACACAAAATGGAATCCAAAATCTCGCTTCTCA
TCTAagCACGAAATCGATCTTGGTCCCATCAACCACCACTACACCTCTCC
CGAAACACATCTCCGACAAACCACCATCTTGCATGATGACGTCACAGCTC
TTGAAATGCGATCCTCGACAACTGCTTGTGACAGGGTATCGTTCTGATGT
CTTCACTTCCAGACCTTTTCTACCGGCGacgaaaagtttgaaaacaacaa
CAGCGACCGCTTCTTCGTCTTACCATGGCAATAAGCAAACAACCCCAAAA
ACTCATCACAGCTTCAGCACGAAATCGATCTTGGTCCCATCAACCACCAC
TACACCTCTCCCGAAACACATCTCCGACAAACCACCATCTTGCATGATGA
CGTCACAGCTCTTGAAATGCGATCCTCGACAACTGCTTGTGACAGGGTAT
CGTTCTGATGTCTTCACTTCCAGACCTTTTCTACCGGCGacgaaaagttt
gaaaacaacaaCAGCGACCGCTTCTTCGTCTTACCATGGCAATAAGCAAA
CAACCCCAAAAACTCATCACAGCTTCAGGTGGAAAACCAAACCATCAAAT
ACTGCACGAGGTGGAAAACCAAACCATCAAATACTGCACGAGTGAACAAT
TACCCAGACCCCATGTATAGTGCAGACTCAGCATTTTTACAGCGTGTGAC
GGAAATGGCCAGTTTGGAGGTGGAAACTGTCAAAACTGAAAAGTGGAAGA
AAATGCGACGAAAATAATGAACAATTACCCAGACCCCATGTATAGTGCAG
ACTCAGCATTTTTACAGCGTGTGACGGAAATGGCCAGTTTGGAGGTGGAA
ACTGTCAAAACTGAAAAGTGGAAGAAAATGCGACGAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:36898..40065 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 574-696:3046 |
| Aaloc | 541-570:1480 |
| Aaloc | 280-537:885 |
| Aaloc | 199-276:471 |
| Aaloc | 1-195:1 |
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