XLOC_040322 (mRNA) -

Overview
NameXLOC_040322
Unique NameXLOC_040322
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000185_pilon:601243..601805+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040322 ID=XLOC_040322|Name=XLOC_040322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=563bp|location=Sequence derived from alignment at sc0000185_pilon:601243..601805+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGTTTGATGTCAACAAAACAATGGTGAGCGAGATGTGCAAACACTTCAG GGAGGCTTGTCAAACGTGGATTGTAGAGACCAACCCAGTGTTTCTTGGTG GGGAAGGGAAACATGTACTGGTGAAAAGATTTAAggtatttttattcttt atccacCAGTCTAAACAAGGTTGTTTATGAATTGTGCTAGCTGATGGAGG GCGGTGTcggtatttaattttttttcaaccatCCCGGATCTTATGAGGgc caattttgattttttcaaatattttaagctGTCAAATAGATAGGATAATA AACTCGTTTTTCGGTGAACAGaccaaatataaataaaaataaaaatcgtt CTTGACTTGAAGGATTGTGACGATGTAAGATGCGAGATCCTCATACTAAC GGAGACGGACAAACAGTTCGGTTATTTGTTACATAACTCAAATAACAGAT ACCAACACGGTTGGCCCATTCCTGTGAAGGCAGGAACATTTGTTTTTTCA GAGAAAGTTCTCAATGTCCCAGCTGGTTGTCAACAAAGCCAGAATGTCca gctttttcaagga

Coding sequence (CDS) from alignment at sc0000185_pilon:601243..601805+

>XLOC_040322 ID=XLOC_040322|Name=XLOC_040322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000185_pilon:601243..601805+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGTTTGATGTCAACAAAACAATGGTGAGCGAGATGTGCAAACACTTCAG
GGAGGCTTGTCAAACGTGGATTGTAGAGACCAACCCAGTGTTTCTTGGTG
GGGAAGGGAAACATGTACTGGAGTTTGATGTCAACAAAACAATGGTGAGC
GAGATGTGCAAACACTTCAGGGAGGCTTGTCAAACGTGGATTGTAGAGAC
CAACCCAGTGTTTCTTGGTGGGGAAGGGAAACATGTACTGGATTGTGACG
ATGTAAGATGCGAGATCCTCATACTAACGGAGACGGACAAACAGTTCGGT
TATTTGTTACATAACTCAAATAACAGATACCAACACGGTTGGCCCATTCC
TGTGAAGGCAGGAACATTTGTTTTTTCAGAGAAAGTTCTCAATGTCCCAG
CTGGTTGTCAACAAAGCCAGAATGTCcagctttttcaaggaGATTGTGAC
GATGTAAGATGCGAGATCCTCATACTAACGGAGACGGACAAACAGTTCGG
TTATTTGTTACATAACTCAAATAACAGATACCAACACGGTTGGCCCATTC
CTGTGAAGGCAGGAACATTTGTTTTTTCAGAGAAAGTTCTCAATGTCCCA
GCTGGTTGTCAACAAAGCCAGAATGTCcagctttttcaagga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040322XLOC_040322-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185_pilongenomesc0000185_pilon:601243..601805 +
Properties
Property NameValue
Aaloc121-321:363
Aaloc1-120:1