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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:285760..291187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040319 ID=XLOC_040319|Name=XLOC_040319|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5428bp|location=Sequence derived from alignment at sc0000019_pilon:285760..291187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCCTGAGTTTGATGCCTCCAAATGCACTAGTTGGTCTGATCACTTT
TGGCAAGATGGTCAACGTTCACGAGCTTGGATGTGAGGGAATCTCAAAAA
GCTATGTTTTCCGTGGAAATAAAGACATTACAGCTAAGCAATTACAGGTA
TGAATATTCAACGTGATTAGTTTATTTGTCCTGTGAGGAATAATTTTGGA
AAAACTATTTCATTTTGTCCTTAATTTCACAATTATCATATCATCAAGGA
ATAAGAGATTTTTTTGATTACTATACTCATCTTTTAAAGATCAAAATTCT
GTTATTTTTATTCCAGGATATGCTTGGTCTTGGTGCATCTTCAAGAACAC
AACAACAGACACAACAACAGGGACGTGGACCAATGGCTCCCCAGCAACAA
GAAGTTCACAATCGGTATGAAATACTTTTCTGTTACATATGAAATTATGA
TATTACAAGATTGTATGTAAATAATAAAAAATCCTTCTTTTCTTTTGGGG
GTGTTTTAAAAAACGTTTTTTGAGAGATGGCAATTGCAGAAATGTAAACC
TGTTTTTTTTTTTGGATCATCAAAATCGTAATTGTTTTCTGCACGCCACA
CTGAAGCTCTAAAGGGATATGTGAAAATAATAATTTCAAATAAATTGACT
TTTTCCTCAGATGGTTAATTTTTAAGTGCCTTAGTGGTTTACGGTGGTGT
AAGCAAATAGTAATTACAAGAGTAATTTCTGTTTGTTTCAGATTTTTACA
ACCAGTTCATAAATGTGACATGGATTTGACTGATCTTCTTGGTGAGTTGC
AAACTGACCCGTGGCCTGTTCCTGCTGACCGTAGACCATACCGCTCAACT
GGGGCTGCTCTTTCTGTTGCTGTCAGCTTGCTCGAGGTAAGCGTCTTCAT
TTTCCATTTCATTAAGAAAGGAAGAGAAAAGTTATGGATGATTCCGATTC
TAAAATGTTTAAGGAATATTTCTACAGTAGAGTTTCCTTTGTATCTCTTA
CAAGGTTCTCAGTAAAGAATGGACAAGTTTATATAATTCGAATTCTCAAT
AACTGGAACAATTTCAATTATCTGTGCATGTCTGATTTATGGAAACTCAA
CTGTTATTTGTAACTTCTATATTTTTTTAAGAAAGTTTTCTTGCAAATAG
TGTTCATCTAATAAGTCATTATTTTCATCGTTTCAATTTTCAGTGTTGTT
ATCCCAACACTGGGGCAAGGATATTGATGTTTGTTGGAGGGCCGTGTACT
CAGGTACTTTTCATAACATTGAGTTTTATATCAAACACCCATTTACTATA
GGATGAAAAAGTTTTGACAATACCATAGTTAATGATAATTAAATACTTAC
TTTTGAAGATTACTTGAAACAGATTTTTCTCAAGGATGTAAGGATGTGCC
CTGACCTGCCCTGACTGCAACTATTTTTGATTCTGCTCTTCTGAGGCCAA
TGTAACCAACCTTAAACGAGAGGTTCATAAGGGGCAGTACACAGGAATTT
ATCAAGTTAACGTTTGAAGACATCCTTTATCGCAATTGTTGAACCTAGAG
TATCTAAATTATGAGCTTCCCTCTTATTTTTAAATGTCAACCTTAAAATA
TGTCCTAACTAACAAGATTTATTTTAATTATTATTGGCTTGTTAAAATGA
ATTAATCTAAATTAAAGGTTTTATTTCTTATTTCTACATACGTGTTCCCG
TTTCATATCAGACACATATTTCATATCAGGACAGTGCCTCCCTTTTATTA
TATTATACTGAATAAACAAAAAATATTTTTCTTTTCCTCTTTTTGACCAA
TCTTGAATCACATCCGTGTCACTTCAATGTGAAATTAAGCTTTGTAATTA
AAATTGATGAGTAATCAAACAATATCACTCTTATTTTAAAAACAGAACCT
CTAAATAAACAATTTCATTTTAGTAGATGGGACAGGATGGGAGCCTCTTT
TTAAAAGCTCATTAAACAAATTTTATGAGTGAAAGGAGTTGCAACCTTGA
AATTTTGAAATTTATCGTTGAAACAAACCATTTCAGGATAAAAACAAAAA
AATCCAAAATTTGTTGAGTTCCCCTTTAAATATCTTCTTTTTATGTATTA
TAGGGACCAGGTATGGTCATTGACCACGAATTAAAGAACGTCATTCGTTC
GTATCACGACATCGAAACTGACAACACTCCACATATGAAGAAAGCCACAA
GACATTATGAGGCTCTAGCTACTCGTGTCGCTAACAATGGTCACACTGTG
GACATCTTTGCGTGCGCTTTGGATCAGGTTGGCCTCAAAGAAATGAAAAG
CTGTGTCAACAATACTGGGTAAGACTTCAGCCCCTCTTCTTATCAAAGCA
GATCAAAGGAGTATTTGGAATACTCTAGTGTTTGAACTTAATTTAATGCC
GGCTCTTTTTCCATCAAGGTTATCGGAGCATTTCGCATGTTATGATACTC
TTAAATATTCGGTTTAAGAGAAATTTCTTCATTCGAACTTTCGCCTCAAG
CTTCAGGACATCTACCAGTTTAACAGGGCTTGTATATGCTGTATAATATT
ACATGATATAGTCCATAGCCGAAATTACGGATGTTATTGAGCTACATGTA
AAAGCTACATAGCACGACTCGTAAGAGAATATCAGCAGCCTAACAATCGA
CCATCATTGATATATTAACATATTGCCTTCTTCTTCTAGTGGCTACATGT
TTATGGGTGATGTCTTCGATTCAGCTTTGTTCAAACAGACATTCCAACGT
GTCTTCGCTAAAGACGCCAATGATGAGTTTAAAACCGCTTACAATGCCAG
CTTCGAAGTTAAGGTAAACTATCCGCTTGACCTTTATGTTAATACTCTAT
ATTTTGAACTTTCATCTATTTCAATAGTTCTTTTACAGGGAATAACATTT
TTTTTTCAATCTCTCTTTTTTAGTCTAGTTTTTGTTAAATAATAAGCGAT
GACAGGTAAAAAAACAAATTACATTTATTTTTAAAGTTATTTTTCATTGC
AGACCTCAAAAGAGCTGAAAGTATCTGGTTGTGTCGGTAATTGTGTTTCT
TTGGAAAGAAAAGGTGGAAATATCTCTGAAACAGTTAGTATTTTAAGTTT
CTCGCACCCTTCGTGAATAACTTCCTTATATGAACAAGAAATTATGGCGG
AAAGAAAAACTGGCGGATTTACCTTAAATCCGAAATCAGCCTAATTAAGT
CCCCGCCATATCCAGCCAAATCTAATCTTTATTCCATACATTCTCAATCC
GCAGGCCTAAAAAGATGTTTAATGCTTATTTAATAGCGAATTTTTAGCCA
GAAATATACTGGAACCCAAAACTTCTTCCTTTCAGGTATATAAGCTTCCC
AATAAACATGAATTATAGTCAATATAAGCTGCTGAGAATGAGATCGATTA
GGCCATTGTTTCTAAATCATAAAACAAACCCCCGTCTCTAAACTTTATTC
TGTGTTCTTTTCGCAGGAAATCGGTATTGGAGGAACAACGGCTTGGAAAG
TCAGTGCTTTGGATCCCAACACAACTTACGCCATCTTTTTTGATGTAGCC
AATCAAGTAAGTTAGGAAATTATGTTGCAATTTTAACCGAAAAAGCTTTT
TCCTATTATAACTTTGTCACTTAATTTATCTTTAGGCTATACTTGAATTC
GAAACCTATTATCTTCCTTTGTGCTCTTCATTTGGATAGTATATTTAAAT
TTGATTTTGTTTAATTTATTTAGCTCGAGACCGGGAGAAGGTCAACTTCG
AGGCACAATCAAACATATATACTCTTATAGTGTTATGTCTAAATTTTTCG
AACGAATTTACTTGTATGTGTGTATTTTACGGACCCGAATGCAATATTTT
TCAATATTTTTTACAGCATACTGCGCCAGTTCCTCAAGGCGGTCGTGGCT
GCATCCAATTCATAACGCAATACCAACACTCGAGTGGCCAACGCCGTGTC
CGCGTCACAACGTGTGCCCGTAACTGGGTGGACTCGTCCAATTTACACTA
CGTAGCTCCTAGTTTTGATCAGGTACACCTTACTACCCTTCCTACACCAT
ACCCGTAGTATACAAATAGATAAGTTTTTTAAGTCTTCGTCTCAACTTTC
GAATCGACTACATTTCACTAGCAGGACTTAGATTTCATATGCTGTATAAC
TTTACACGACAAAAATCTTTTTAGACGTAGCACATGTATATTATACAATA
TTTTCATCTGAGGAGCCCAATAGAAATTTTAGAAGCTGAAACAAACCATC
TCAAACACGGATATAAAGAGGCTCAAAATTCTGCATAATTCACCGAATTT
CAAGAATATAGTGATAATTTACTGTGTAAAACCAATCTGCCGTCTCGATA
AATACCAATATTATTTACCAAGGTATTTATCGAGACAGCAAATTGGTTTT
ACACAGTAAATTATCACAATATTCTTGAAATTCGGCGAATTTTGACCACT
GAATATAAATTTTGGAAGCAGAAACAAACAATTATTATTATTGTTATTAT
TAGGAGGCGTCAGCGGTCCTCATGGCGCGTGTCGCCACACACCGTTGCGA
GACGGACGATAATGCTCAGGATATCCTGCGATGGCTGGATCGTATGTTGA
TCCGATGTGTTCAGAAAGTCGGCGAGTACAACAAAGATGACCCGAATTCG
TTAAGATTAGCTGAAAACTTCTCACTTTACCCACAGGTAAGGTTTAAACG
ATTTCATTTTCAGCTGAGGTCTTGAAATCTTCTAGAGCGTCTTTTATTTT
GAGGATTTTGTGTAAAATGCCTTTTAGATTTTACTCATTTTTATACAATA
ACTTTTGAAACATTTAGCTATGGACAGAATAGCAAAATGTCTGAATTTTT
TAATTTAGTCAGTGACTGTTTGAAGTTTTCTTTTTGGTCAATACTTTAGG
GACCAGAATACAAAAAAAAGAATAATTTGTCATAAGCAAAACTGAGTCAT
TTGGGAAGCCCAACCTTACTAAAATCGCTCATCAGATTTGAAATGCACCA
TTACTAGCCTAGAAAGCTTTCCTATTATTTATCTTCCCTCTCTTTCTTTT
GTTTTGTAGTTTATGTTCCATTTGCGTCGCTCACAATTCTTACAATACTT
CAACAACAGTCCGGACGAAACATCTTTTTACCGGCACTGGTTGAACAACG
AAGATGTCACAAATTCTCTTATCATGATTCAACCCATCCTATATTCTTAT
TCGTTCCATGGTCCACCAGAACCTGTTCTCCTGGATTCAAGTAGTATCCA
ACCGGACACTATCTTATTATTGGACACTTACTTCTTAGTCTGCATTTATT
ATGGAGAGGTGAGATTCGTTTATTTTGCACTGCAACAAGACTTAACAATA
AATAAAAGGAAGAAAAAAATCTTGCTCCACATCTTTCTTTATTCATTACA
AAAGATTCTATTTATTTCAATCTGCTGA Coding sequence (CDS) from alignment at sc0000019_pilon:285760..291187- >XLOC_040319 ID=XLOC_040319|Name=XLOC_040319|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3336bp|location=Sequence derived from alignment at sc0000019_pilon:285760..291187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCCTGAGTTTGATGCCTCCAAATGCACTAGTTGGTCTGATCACTTT
TGGCAAGATGGTCAACGTTCACGAGCTTGGATGTGAGGGAATCTCAAAAA
GCTATGTTTTCCGTGGAAATAAAGACATTACAGCTAAGCAATTACAGATG
TCCCTGAGTTTGATGCCTCCAAATGCACTAGTTGGTCTGATCACTTTTGG
CAAGATGGTCAACGTTCACGAGCTTGGATGTGAGGGAATCTCAAAAAGCT
ATGTTTTCCGTGGAAATAAAGACATTACAGCTAAGCAATTACAGGATATG
CTTGGTCTTGGTGCATCTTCAAGAACACAACAACAGACACAACAACAGGG
ACGTGGACCAATGGCTCCCCAGCAACAAGAAGTTCACAATCGGATATGCT
TGGTCTTGGTGCATCTTCAAGAACACAACAACAGACACAACAACAGGGAC
GTGGACCAATGGCTCCCCAGCAACAAGAAGTTCACAATCGATTTTTACAA
CCAGTTCATAAATGTGACATGGATTTGACTGATCTTCTTGGTGAGTTGCA
AACTGACCCGTGGCCTGTTCCTGCTGACCGTAGACCATACCGCTCAACTG
GGGCTGCTCTTTCTGTTGCTGTCAGCTTGCTCGAGATTTTTACAACCAGT
TCATAAATGTGACATGGATTTGACTGATCTTCTTGGTGAGTTGCAAACTG
ACCCGTGGCCTGTTCCTGCTGACCGTAGACCATACCGCTCAACTGGGGCT
GCTCTTTCTGTTGCTGTCAGCTTGCTCGAGTGTTGTTATCCCAACACTGG
GGCAAGGATATTGATGTTTGTTGGAGGGCCGTGTACTCAGTGTTGTTATC
CCAACACTGGGGCAAGGATATTGATGTTTGTTGGAGGGCCGTGTACTCAG
GGACCAGGTATGGTCATTGACCACGAATTAAAGAACGTCATTCGTTCGTA
TCACGACATCGAAACTGACAACACTCCACATATGAAGAAAGCCACAAGAC
ATTATGAGGCTCTAGCTACTCGTGTCGCTAACAATGGTCACACTGTGGAC
ATCTTTGCGTGCGCTTTGGATCAGGTTGGCCTCAAAGAAATGAAAAGCTG
TGTCAACAATACTGGGGACCAGGTATGGTCATTGACCACGAATTAAAGAA
CGTCATTCGTTCGTATCACGACATCGAAACTGACAACACTCCACATATGA
AGAAAGCCACAAGACATTATGAGGCTCTAGCTACTCGTGTCGCTAACAAT
GGTCACACTGTGGACATCTTTGCGTGCGCTTTGGATCAGGTTGGCCTCAA
AGAAATGAAAAGCTGTGTCAACAATACTGGTGGCTACATGTTTATGGGTG
ATGTCTTCGATTCAGCTTTGTTCAAACAGACATTCCAACGTGTCTTCGCT
AAAGACGCCAATGATGAGTTTAAAACCGCTTACAATGCCAGCTTCGAAGT
TAAGTGGCTACATGTTTATGGGTGATGTCTTCGATTCAGCTTTGTTCAAA
CAGACATTCCAACGTGTCTTCGCTAAAGACGCCAATGATGAGTTTAAAAC
CGCTTACAATGCCAGCTTCGAAGTTAAGACCTCAAAAGAGCTGAAAGTAT
CTGGTTGTGTCGGTAATTGTGTTTCTTTGGAAAGAAAAGGTGGAAATATC
TCTGAAACAACCTCAAAAGAGCTGAAAGTATCTGGTTGTGTCGGTAATTG
TGTTTCTTTGGAAAGAAAAGGTGGAAATATCTCTGAAACAGAAATCGGTA
TTGGAGGAACAACGGCTTGGAAAGTCAGTGCTTTGGATCCCAACACAACT
TACGCCATCTTTTTTGATGTAGCCAATCAAGAAATCGGTATTGGAGGAAC
AACGGCTTGGAAAGTCAGTGCTTTGGATCCCAACACAACTTACGCCATCT
TTTTTGATGTAGCCAATCAACATACTGCGCCAGTTCCTCAAGGCGGTCGT
GGCTGCATCCAATTCATAACGCAATACCAACACTCGAGTGGCCAACGCCG
TGTCCGCGTCACAACGTGTGCCCGTAACTGGGTGGACTCGTCCAATTTAC
ACTACGTAGCTCCTAGTTTTGATCAGCATACTGCGCCAGTTCCTCAAGGC
GGTCGTGGCTGCATCCAATTCATAACGCAATACCAACACTCGAGTGGCCA
ACGCCGTGTCCGCGTCACAACGTGTGCCCGTAACTGGGTGGACTCGTCCA
ATTTACACTACGTAGCTCCTAGTTTTGATCAGGAGGCGTCAGCGGTCCTC
ATGGCGCGTGTCGCCACACACCGTTGCGAGACGGACGATAATGCTCAGGA
TATCCTGCGATGGCTGGATCGTATGTTGATCCGATGTGTTCAGAAAGTCG
GCGAGTACAACAAAGATGACCCGAATTCGTTAAGATTAGCTGAAAACTTC
TCACTTTACCCACAGGAGGCGTCAGCGGTCCTCATGGCGCGTGTCGCCAC
ACACCGTTGCGAGACGGACGATAATGCTCAGGATATCCTGCGATGGCTGG
ATCGTATGTTGATCCGATGTGTTCAGAAAGTCGGCGAGTACAACAAAGAT
GACCCGAATTCGTTAAGATTAGCTGAAAACTTCTCACTTTACCCACAGTT
TATGTTCCATTTGCGTCGCTCACAATTCTTACAATACTTCAACAACAGTC
CGGACGAAACATCTTTTTACCGGCACTGGTTGAACAACGAAGATGTCACA
AATTCTCTTATCATGATTCAACCCATCCTATATTCTTATTCGTTCCATGG
TCCACCAGAACCTGTTCTCCTGGATTCAAGTAGTATCCAACCGGACACTA
TCTTATTATTGGACACTTACTTCTTAGTCTGCATTTATTATGGAGAGGTG
AGATTCGTTTATTTTGCACTGCAACAAGACTTAACAATAAATAAAAGGAA
GAAAAAAATCTTGCTCCACATCTTTCTTTATTCATTACAAAAGATTCTAT
TTATTTCAATCTGCTGATTTATGTTCCATTTGCGTCGCTCACAATTCTTA
CAATACTTCAACAACAGTCCGGACGAAACATCTTTTTACCGGCACTGGTT
GAACAACGAAGATGTCACAAATTCTCTTATCATGATTCAACCCATCCTAT
ATTCTTATTCGTTCCATGGTCCACCAGAACCTGTTCTCCTGGATTCAAGT
AGTATCCAACCGGACACTATCTTATTATTGGACACTTACTTCTTAGTCTG
CATTTATTATGGAGAGGTGAGATTCGTTTATTTTGCACTGCAACAAGACT
TAACAATAAATAAAAGGAAGAAAAAAATCTTGCTCCACATCTTTCTTTAT
TCATTACAAAAGATTCTATTTATTTCAATCTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:285760..291187 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1300-1668:370 |
| Aaloc | 1117-1299:926 |
| Aaloc | 961-1116:1563 |
| Aaloc | 871-960:1963 |
| Aaloc | 790-870:2427 |
| Aaloc | 667-789:2739 |
| Aaloc | 451-663:3326 |
| Aaloc | 391-450:4236 |
| Aaloc | 247-390:4687 |
| Aaloc | 148-243:5113 |
| Aaloc | 1-147:5429 |
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