|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:197531..200442+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040316 ID=XLOC_040316|Name=XLOC_040316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2912bp|location=Sequence derived from alignment at sc0000019_pilon:197531..200442+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCCTGGAATACATAAGGAAGAGGTACAGAAGGAGAAACCTGTCTT
TACTCTCAAACAGATAGCTGAGCACAAAACTGAAGATGACTGTTGGGTGG
CTATTGATAGCAGTGTTTACAACATCACCAACTGGCTATCAAAACACCCT
GGTGGAAAATCTGTCCTTTTCAATTTTGCCGGCACCGATTGCTCGGATGA
GTTCCGTATTTTTCATTACAATCCGAACTATAAACGTCTAAAGGCTTTCC
GCGTTGGTACACTACACCCGGACGACCAACGAAAAGACACGGCTGTTTCT
AAAGATCTTCAAGAACTACACGCTCGAATCAAATCGGAAGGAGCCTTTCT
ACCTGACTGTAAGTTGTTGTTATCATAAACACGAAcgatttctttataag
aacaaactatataactaacataatgcttcgatggCCGAGAATTTAAGAAC
GAGTTGATAACACTTTCTCTATAATACCAAATTTCTTTGGAAATAcgcgc
tttttcttttataagaatagtgtactttggttgagggtgagcattgttct
tatttttccatTGTTCTAAACAATGGGCCtgttgttttaaacccgaaatc
tcaccctgatattcttatagaagttattcttataaaagaaaaagcgtgta
ttcgcATAAAAGTACTAacaaaaaaatggtgaaaataagaacatttttag
gcttaaaacccaattAGTTTTGAACATCTGaaggttttaacaattttgga
tgttcttataaaaagtttagTTCTTTGATCATCATGGTTCGAACCGgtgt
ttttcattaaaaaatgatatttgaaagcagaaaaaaaagatggcctgatt
ttttctctctctaaCTAAGCCGACAGAGCGAGCAATAATGGCCCTATTAT
GataattttgcaataaaaataGCACGCTAGCTGCGAATGGGTAGGTCAGC
GTGTCAGCTCGACTGTTGAGATCAGGGAATCACCTGTCTGATCGCCTAAT
GAGATTACTAGTTCAATATGTTAAACTTGTCAAAAAAGGAAGTATTATTA
TAGATATGGTATGCATGGCAACCAAGCTTAATACCTGATTTTACTCAAAA
TGATATAGGAAAGGATAAGCACGGCTAATACAGTGCTATTTTGATTGTGA
TGCAACATAATATCTAAAGCATGTCAAACTTCCTTCTTCTCAAACAGTCT
TTTGACAATTGCTTATcagaaaatgttcttagcatgttcttattttcacc
attttataaGCATTCTTGCctattttccttagaaatttgtgttttagagt
ccccgaagccttaaaatgttctcaacttgttcttaagttttaagcctttt
gttcttacatagtttgttcttataaaacgatCTTCTTATGCTGACCAATT
TCTCTCCATGAAAATCTGacttttttctcatcttcttaGATTGGTTTTAT
GCTGGACGAGCCGCTATTATTCTCTCATTATTTGCCGTTTCTGCTTACCT
ATTCAACTACACTCCATCCTTATGGACATGCGCGGCGAGCGGATTCTTCC
TTGGATTGGCATGGCAACAATTGGCGTTCGTCGGACACGATATCGGACAC
CATGTTGTGTCACATGATCATAAAATCGATGACAATCTGGGAATTGTTTT
CGGGAACTTCCTCCAAGGtacttttcttttactttttttgcatTCTCAAT
GCCACTCTACCCAGACACAAGGAAAACTCGAAAAAGCTTGCAAAAATTAT
TGCTTATTATAGCTTCCCGATTAGGAGGATTTATATTACTGAGCACCAAA
TAAATGCTTGATTTCAAAAGTAGTTCGGTTTCCTTCTTTATTAATCGTAC
TTAGATTCTATTTGCGAAGCAGGGGTGTTTTAGAACGACATGAAATAAAT
TATGGTCAATAATACAGTCGAGTCTCTTCTAGCTCGAACCTCTACAATTC
AAATGTTTCCTTAATTTATTTCGTCCCTTCCAGTAAACAATGCCTTTCTT
TAAACCTCGTAATTTCCTCAAGCAAACTTGGATTCCTCGTTTGTGTTTGA
GTTATAGGGAATCCACTGTAATaatctttttaccatttttaccATCTATA
TTCTCTTTTCAACGTTCTCAGGAATCAGTTTGGAATGGTGGAAGCACAGT
CATAACACTCATCACACTGTGACCAATTCTGTAACACACGATCCTGACAT
CCAACATTTACCATTCCTGGCAGTCAATAAAGCATTCTTCAAATCTATCT
TCTCAAAGTATTACTACAAAACGTTGAACTTTGACAAAGTTAGCGAGTTC
TTCATTGCTAAGCAGCACTATTTATTTTACGTTGTCATGGGGTTAGCGCG
TTTCAATCTTTACGCGCAAAGCTTCCGTCATAATTTGGTTGGTGCTGGTT
CTACACACACCAGAAAAAACATCGAATTGGTATCCTTGTTCGgattttgg
gtgtggttactCACTGTTTTATCGTTGACACCAACATGGTGGCACACGGC
TGTCTTCGTGTTGGTTTCGCACGCTGTTGCCGGTATTGTACACGTCCAGA
TTTGCATCAATCATTTCCCAATGAAGGTATATGAAGGTGTTCCTCAGAAA
GCTTTTACCAATGATGGTTATCTGATGTCACAACTGATGACAACACGAGA
TATCGAGTGCCCACCTTTCATGGACTTCTTTCACGGTGGACTTCAGTTCC
AAATCGAACATCACATTTTCCCACATTTAACGAGAAGCCATTTGAGACGT
GTCCAAGACGAGCTGAAGAAGATTTGCAAGAAACACGATTTGCCTTTTCA
AAATGTACCCTTCTGGAGAGCCAATTGGGATGTGATCGTTAAGTTGTATG
AAACGTCTAAAGAACTAAAAATATCTGAAATCTTTATGGATGGAATCAAC
ATGAATGGTTAG Coding sequence (CDS) from alignment at sc0000019_pilon:197531..200442+ >XLOC_040316 ID=XLOC_040316|Name=XLOC_040316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000019_pilon:197531..200442+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCCTGGAATACATAAGGAAGAGGTACAGAAGGAGAAACCTGTCTT
TACTCTCAAACAGATAGCTGAGCACAAAACTGAAGATGACTGTTGGGTGG
CTATTGATAGCAGTGTTTACAACATCACCAACTGGCTATCAAAACACCCT
GGTGGAAAATCTGTCCTTTTCAATTTTGCCGGCACCGATTGCTCGGATGA
GTTCCGTATTTTTCATTACAATCCGAACTATAAACGTCTAAAGGCTTTCC
GCGTTGGTACACTACACCCGGACGACCAACGAAAAGACACGGCTGTTTCT
AAAGATCTTCAAGAACTACACGCTCGAATCAAATCGGAAGGAGCCTTTCT
ACCTGACTATGAATCCTGGAATACATAAGGAAGAGGTACAGAAGGAGAAA
CCTGTCTTTACTCTCAAACAGATAGCTGAGCACAAAACTGAAGATGACTG
TTGGGTGGCTATTGATAGCAGTGTTTACAACATCACCAACTGGCTATCAA
AACACCCTGGTGGAAAATCTGTCCTTTTCAATTTTGCCGGCACCGATTGC
TCGGATGAGTTCCGTATTTTTCATTACAATCCGAACTATAAACGTCTAAA
GGCTTTCCGCGTTGGTACACTACACCCGGACGACCAACGAAAAGACACGG
CTGTTTCTAAAGATCTTCAAGAACTACACGCTCGAATCAAATCGGAAGGA
GCCTTTCTACCTGACTATTGGTTTTATGCTGGACGAGCCGCTATTATTCT
CTCATTATTTGCCGTTTCTGCTTACCTATTCAACTACACTCCATCCTTAT
GGACATGCGCGGCGAGCGGATTCTTCCTTGGATTGGCATGGCAACAATTG
GCGTTCGTCGGACACGATATCGGACACCATGTTGTGTCACATGATCATAA
AATCGATGACAATCTGGGAATTGTTTTCGGGAACTTCCTCCAAGATTGGT
TTTATGCTGGACGAGCCGCTATTATTCTCTCATTATTTGCCGTTTCTGCT
TACCTATTCAACTACACTCCATCCTTATGGACATGCGCGGCGAGCGGATT
CTTCCTTGGATTGGCATGGCAACAATTGGCGTTCGTCGGACACGATATCG
GACACCATGTTGTGTCACATGATCATAAAATCGATGACAATCTGGGAATT
GTTTTCGGGAACTTCCTCCAAGGAATCAGTTTGGAATGGTGGAAGCACAG
TCATAACACTCATCACACTGTGACCAATTCTGTAACACACGATCCTGACA
TCCAACATTTACCATTCCTGGCAGTCAATAAAGCATTCTTCAAATCTATC
TTCTCAAAGTATTACTACAAAACGTTGAACTTTGACAAAGTTAGCGAGTT
CTTCATTGCTAAGCAGCACTATTTATTTTACGTTGTCATGGGGTTAGCGC
GTTTCAATCTTTACGCGCAAAGCTTCCGTCATAATTTGGTTGGTGCTGGT
TCTACACACACCAGAAAAAACATCGAATTGGTATCCTTGTTCGgattttg
ggtgtggttactCACTGTTTTATCGTTGACACCAACATGGTGGCACACGG
CTGTCTTCGTGTTGGTTTCGCACGCTGTTGCCGGTATTGTACACGTCCAG
ATTTGCATCAATCATTTCCCAATGAAGGTATATGAAGGTGTTCCTCAGAA
AGCTTTTACCAATGATGGTTATCTGATGTCACAACTGATGACAACACGAG
ATATCGAGTGCCCACCTTTCATGGACTTCTTTCACGGTGGACTTCAGTTC
CAAATCGAACATCACATTTTCCCACATTTAACGAGAAGCCATTTGAGACG
TGTCCAAGACGAGCTGAAGAAGATTTGCAAGAAACACGATTTGCCTTTTC
AAAATGTACCCTTCTGGAGAGCCAATTGGGATGTGATCGTTAAGTTGTAT
GAAACGTCTAAAGAACTAAAAATATCTGAAATCTTTATGGATGGAATCAA
CATGAATGGTTAGGAATCAGTTTGGAATGGTGGAAGCACAGTCATAACAC
TCATCACACTGTGACCAATTCTGTAACACACGATCCTGACATCCAACATT
TACCATTCCTGGCAGTCAATAAAGCATTCTTCAAATCTATCTTCTCAAAG
TATTACTACAAAACGTTGAACTTTGACAAAGTTAGCGAGTTCTTCATTGC
TAAGCAGCACTATTTATTTTACGTTGTCATGGGGTTAGCGCGTTTCAATC
TTTACGCGCAAAGCTTCCGTCATAATTTGGTTGGTGCTGGTTCTACACAC
ACCAGAAAAAACATCGAATTGGTATCCTTGTTCGgattttgggtgtggtt
actCACTGTTTTATCGTTGACACCAACATGGTGGCACACGGCTGTCTTCG
TGTTGGTTTCGCACGCTGTTGCCGGTATTGTACACGTCCAGATTTGCATC
AATCATTTCCCAATGAAGGTATATGAAGGTGTTCCTCAGAAAGCTTTTAC
CAATGATGGTTATCTGATGTCACAACTGATGACAACACGAGATATCGAGT
GCCCACCTTTCATGGACTTCTTTCACGGTGGACTTCAGTTCCAAATCGAA
CATCACATTTTCCCACATTTAACGAGAAGCCATTTGAGACGTGTCCAAGA
CGAGCTGAAGAAGATTTGCAAGAAACACGATTTGCCTTTTCAAAATGTAC
CCTTCTGGAGAGCCAATTGGGATGTGATCGTTAAGTTGTATGAAACGTCT
AAAGAACTAAAAATATCTGAAATCTTTATGGATGGAATCAACATGAATGG
TTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:197531..200442 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-1377:2124 |
| Aaloc | 361-585:1442 |
| Aaloc | 1-357:1 |
|
